高丹草杂种及其亲本转录组SNP及等位基因特异性表达分析
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董婧,逯晓萍,张坤明,薛春雷,张瑞霞
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Analysis of SNP and Allele-specific Expression in Transcriptome of Sorghum bicolor × Sorghum sudanense and Their Parents
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Jing DONG,Xiao-Ping LU,Kun-Ming ZHANG,Chun-Lei XUE,Rui-Xia ZHANG
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表3 10个等位基因表达偏向性SNPs
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Table 3 Allelic-specific expression in ten SNPs
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编号
No. | 基因名称
Gene ID | 位置
Position | ♂ | F1 | ♀ | 深度
Depth | 染色体
Chr. | | 1 | Sobic.001G191200 | 16936477 | A | A | R | 477 | 1 | | 2 | Sobic.001G293800 | 50043262 | G | R | R | 394 | 1 | | 3 | Sobic.002G215700 | 60749644 | C | C | S | 518 | 2 | | 4 | Sobic.002G215700 | 60750650 | T | T | Y | 476 | 2 | | 5 | Sobic.003G085700 | 7390162 | T | T | W | 353 | 3 | | 6 | Sobic.003G206800 | 53754265 | T | Y | Y | 361 | 3 | | 7 | Sobic.003G314500 | 64282541 | T | T | K | 492 | 3 | | 8 | Sobic.003G314500 | 64279654 | C | C | Y | 419 | 3 | | 9 | Sobic.004G225100 | 56832538 | C | C | Y | 476 | 4 | | 10 | Sobic.004G253000 | 59205755 | T | T | Y | 335 | 4 |
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