利用WGCNA进行玉米花期基因共表达模块鉴定
杨宇昕,桑志勤,许诚,代文双,邹枨

Identification of maize flowering gene co-expression modules by WGCNA
Yu-Xin YANG,Zhi-Qin SANG,Cheng XU,Wen-Shuang DAI,Cheng ZOU
附表1 组织特异性模块的GO富集分析结果(部分)
Supplementary table 1 GO enrichment analysis results of tissue specific module (part)
模块
Module
GO条目
GO term
本体
Ontology
描述
Description
P
P-value
Darkorange2 GO: 0009889 BP 生物合成过程调节Regulation of biosynthetic process 6.90E-07
Darkorange2 GO: 0006355 BP DNA依赖的转录调节Regulation of transcription, DNA-dependent 4.40E-07
Darkorange2 GO: 0015267 MF 通道活性Channel activity 0.00068
Darkorange2 GO: 0022838 MF 底物特异性通道活性Substrate-specific channel activity 0.00068
Blue GO: 0009628 BP 非生物刺激的反应Response to abiotic stimulus 3.60E-10
Blue GO: 0009416 BP 光刺激响应Response to light stimulus 1.60E-08
Blue GO: 0003700 MF 转录因子活性Transcription factor activity 0.00017
Blue GO: 0009535 CC 叶绿体类囊体膜Chloroplast thylakoid membrane 0.00022
Darkred GO: 0051186 BP 辅因子代谢过程Cofactor metabolic process 1.20E-19
Darkred GO: 0004252 MF 丝氨酸型肽链内切酶活性Serine-type endopeptidase activity 0.00015
Darkred GO: 0009543 CC 叶绿体类囊体腔 Chloroplast thylakoid lumen 4.40E-13
Darkslateblue GO: 0016051 BP 碳水化合物生物合成过程Carbohydrate biosynthetic process 5.60E-05
Darkslateblue GO: 0016830 MF 碳-碳裂解酶活性Carbon-carbon lyase activity 3.40E-06
Darkslateblue GO: 0042651 CC 类囊体膜Thylakoid membrane 0.00013
Turquoise GO: 0060560 BP 形态发生发育Developmental growth involved in morphogenesis 1.70E-11
Turquoise GO: 0015299 MF 溶质: 氢反向转运蛋白活性Solute: hydrogen antiporter activity 4.60E-05
Turquoise GO: 0031224 CC 内膜Intrinsic to membrane 8.50E-06
Darkmagenta GO: 0010927 BP 涉及形态发生的内膜组装
Cellular component assembly involved in morphogenesis
4.10E-09
Darkmagenta GO: 0004553 MF 水解酶活性, 水解O-糖基化合物
Hydrolase activity, hydrolyzing O-glycosyl compounds
7.60E-06
Darkmagenta GO: 0030312 CC 高尔基体Golgi apparatus 0.0004
Bisque4 GO: 0042180 BP 细胞酮代谢过程Cellular ketone metabolic process 3.00E-08
Bisque4 GO: 0044281 BP 小分子代谢过程Small molecule metabolic process 9.90E-06
Bisque4 GO: 0042221 BP 相应化学刺激Response to chemical stimulus 0.00032
Darkgrey GO: 0010033 BP 对有机物质的反应Response to organic substance 1.60E-07
Darkgrey GO: 0004553 MF 水解酶活性, 水解O-糖基化合物
Hydrolase activity, hydrolyzing O-glycosyl compounds
4.40E-10
Darkgrey GO: 0005740 CC 线粒体包膜Mitochondrial envelope 7.40E-05
Floralwhite GO: 0006412 BP 蛋白质翻译Translation 9.10E-07
Floralwhite GO: 0005198 MF 结构分子活性Structural molecule activity 5.80E-08
Floralwhite GO: 0043227 CC 膜有界细胞器Membrane-bounded organelle 0.0085
Darkolivegreen GO: 0010022 BP 分生组织决定Meristem determinacy 6.10E-07
模块
Module
GO条目
GO term
本体
Ontology
描述
Description
P
P-value
Darkolivegreen GO: 0003700 MF 转录因子活性Transcription factor activity 5.50E-05
Orange GO: 0042542 BP 过氧化氢反应Response to hydrogen peroxide 2.90E-05
Orange GO: 0009526 CC 质体Plastid 9.60E-09
Yellow GO: 0009605 BP 响应外界刺激Response to external stimulus 8.40E-10
Yellow GO: 0022892 MF 底物特异性转运体活性Substrate-specific transporter activity 0.00013
Plum2 GO: 0048437 BP 花器官发育Floral organ development 9.20E-05
Plum2 GO: 0005576 CC 胞外区Extracellular region 9.70E-05
Greenyellow GO: 0034220 BP 离子跨膜转运Ion transmembrane transport 5.00E-13
Greenyellow GO: 0032561 MF 鸟苷酸核糖核酸结合Guanyl ribonucleotide binding 2.40E-10
Greenyellow GO: 0043231 CC 内细胞器膜Organelle inner membrane 1.20E-17