甘蓝型油菜光敏色素互作因子4 (BnaPIF4)基因克隆和功能分析

冯韬,官春云

Cloning and characterization of phytochrome interacting factor 4 (BnaPIF4) gene from Brassica napus L.

Tao FENG,Chun-Yun GUAN

表2 BnaPIF4_A03和BnaPIF4_C03蛋白特殊识别位点序列总表

Table 2 Summary of specific region of BnaPIF4_A03 and BnaPIF4_C03

蛋白编号 Serial number 位点类型 Domains type 数量 Number 位置 Location 序列 Sequence 序列模式 Sequence motif BnaPIF4_A03 PS00001 4 158-161, 185-188, 234-237, 253-256 NQSQ, NSSS, NKSN, NLSE N-{P}-[ST]-{P} PS00005 7 43-45, 61-63, 242-244, 243-245, 255-257, 280-282, 400-402 THR, TLR, STR, TRR, SER, TDK, SQR [ST]-x-[RK] PS00006 9 7-10, 43-46, 66-69, 97-100, 160-163, 162-165, 175-178, 226-229, 284-287 SFEE, THRD, TFLE, STID, SQTD, TDLD, TIDE, SQSD, SILE [ST]-x(2)-[DE] PS00007 1 174-181 KTIDERLY [RK]-x(2,3)-[DE]-x(2,3)-Y PS00008 8 156-161, 189-194, 190-195, 193-198, 232-237, 306-311, 308-313, 393-398 GSNQSQ, GGSSGC, GSSGCS, GCSLGK, GNNKSN, GSGMAG, GMAGAA, GSPAGQ G-{EDRKHPFYW}-x(2)-[STAGCN]-{P} PS00845 2 371-377, 368-377 GRYVGLF, DRFGRYVGLF [GD]-x(1)-[FYWA]-x(1)-G-[LIVM]-x(0)-[LIVMFYD] BnaPIF4_C03 PS00001 4 13-16, 158-161, 185-188, 253-256 NLSN, NQSQ, NSSS, NLSE N-{P}-[ST]-{P} PS00005 8 43-45, 61-63, 109-111, 242-244, 243-245, 255-257, 280-282, 400-402 THR, TLR, STR, TRR, SER, TDK, SQR, THR, TLR, TVK, STR, TRR, SER, TDK, SQR [ST]-x-[RK] PS00006 10 7-10, 43-46, 66-69, 97-100, 160-163, 162-165, 175-178, 226-229, 278-281, 284-287 SFEE, THRD, TFLE, STID, SQTD, TDLD, TIDE, SQSD, TKTD, SILE [ST]-x(2)-[DE] PS00007 1 174-181 KTIDERLY [RK]-x(2,3)-[DE]-x(2,3)-Y PS00008 9 156-161, 189-194, 190-195, 193-198, 232-237, 239-244, 306-311, 308-313, 393-398 GSNQSQ, GGSSGC, GSSGCS, GCSLGK, GNNKSN, GSGSTR, GSGMAG, GMAGAA, GSPAGQ G-{EDRKHPFYW}-x(2)-[STAGCN]-{P} PS00845 2 371-377, 368-377 GRYVGLF, DRFGRYVGLF [GD]-x(1)-[FYWA]-x(1)-G-[LIVM]-x(0)-[LIVMFYD]