甘蓝型油菜PEBP基因家族的鉴定与表达分析

荐红举,杨博,李阳阳,杨鸿,刘列钊,徐新福,李加纳

Identification and expression analysis of PEBP gene family in oilseed rape

Hong-Ju JIAN,Bo YANG,Yang-Yang LI,Hong YANG,Lie-Zhao LIU,Xin-Fu XU,Jia-Na LI

表2 油菜和拟南芥PEBP同源基因的Ka/Ks

Table 2 Ka/Ks valus of BEBP genes between B. napus and A. thaliana species

油菜基因编号 Gene ID in B. napus 拟南芥基因编号 Gene ID in A. thaliana 基因模型 Gene model 非同义突变频率 Ka 同义突变频率 Ks Ka/Ks BnaA02g12130D AT1G65480 FT 0.09 0.32 0.27 BnaC02g45250D AT1G65480 FT 0.08 0.35 0.24 BnaC04g14850D AT1G65480 FT 0.11 0.80 0.14 BnaA10g26300D AT5G03840 TFL1 0.08 0.37 0.23 BnaAnng00810D AT5G03840 TFL1 0.05 0.39 0.14 BnaC02g02900D AT5G03840 TFL1 0.05 0.39 0.14 BnaC03g01440D AT5G03840 TFL1 0.03 0.41 0.07 BnaCnng10680D AT5G03840 TFL1 0.08 0.35 0.22 BnaA07g25310D AT4G20370 TSF 0.10 0.80 0.12 BnaA07g33120D AT4G20370 TSF 0.09 0.45 0.21 BnaC02g23820D AT4G20370 TSF 0.13 0.45 0.30 BnaC06g27090D AT4G20370 TSF 0.23 0.88 0.26 BnaA03g22340D AT2G27550 ATC 0.02 0.31 0.07 BnaA04g15930D AT2G27550 ATC 0.03 0.33 0.08 BnaA07g13290D AT2G27550 ATC 0.03 0.49 0.06 BnaC01g41050D AT2G27550 ATC 0.03 0.33 0.08 BnaC03g47080D AT2G27550 ATC 0.03 0.31 0.10 BnaC03g64560D AT2G27550 ATC 0.03 0.33 0.08 BnaC04g16750D AT2G27550 ATC 0.03 0.52 0.07 BnaC04g39220D AT2G27550 ATC 0.06 0.39 0.15 BnaA06g21490D AT5G62040 BFT 0.05 0.31 0.17 BnaC03g52010D AT5G62040 BFT 0.05 0.31 0.18 BnaA09g44700D AT1G18100 MFT 0.02 0.40 0.05 BnaC08g37400D AT1G18100 MFT 0.02 0.45 0.05 BnaC05g50120D AT1G18100 MFT 0.03 0.37 0.08 BnaA06g12320D AT1G18100 MFT 0.03 0.37 0.09