甘蓝型油菜NRT1.5和NRT1.8家族基因的生物信息学分析及其对氮-镉胁迫的响应

梁桂红,华营鹏,周婷,廖琼,宋海星,张振华

Bioinformatics analysis and response to nitrate-cadmium stress of NRT1.5 and NRT1.8 family genes in Brassica napus

Gui-Hong LIANG,Ying-Peng HUA,Ting ZHOU,Qiong LIAO,Hai-Xing SONG,Zhen-Hua ZHANG

表1 白菜、甘蓝和甘蓝型油菜NRT1.5和NRT1.8基因的分子特性

Table 1 Molecular characterization of NRT1.5 and NRT1.8 genes in B. rapa, B. oleracea, and B. napus

基因名 Gene name 基因编号 Gene ID 分区 Block 亚类 Subgenome 物理位置 Physical position 编码区长度 CDS (bp) 外显子/内含子Exon/intron NRT1.5 BraA5.NRT1.5 Bra010165 B MF2 15109908-15113350 1815 5/4 BraA9.NRT1.5 Bra023267 B LF 20166714-20170510 1833 5/4 BolC5.NRT1.5a Bol020904 B MF2 13227461-13230901 1812 5/4 BolC5.NRT1.5b Bol022226 B LF 10183303-10186752 1236 5/4 BnaA5.NRT1.5 BnaA05g35790D B MF2 1269482-1274007 1845 6/5 BnaA9.NRT1.5 BnaA09g24330D B LF 17085147-17089456 1863 6/5 BnaC5.NRT1.5a BnaC05g28620D B MF2 26898087-26903213 1845 6/5 BnaC5.NRT1.5b BnaC05g24580D B LF 19037761-19041900 1860 6/5 NRT1.8 BraA1.NRT1.8 Bra013547 U LF 6243271-6245298 1752 4/3 BraA3.NRT1.8 Bra038763 U MF1 24230588-24232594 1752 4/3 BolC1.NRT1.8 Bol028440 U LF 8086050-8088075 1752 4/3 BolC6.NRT1.8 Bol024295 U MF1 42081659-42082729 897 3/2 BnaA1.NRT1.8 BnaA01g11510D U LF 5715790-5718126 1752 4/3 BnaA3.NRT1.8 BnaA03g44820D U MF1 22774854-22776862 1752 4/3 BnaC7.NRT1.8 BnaC07g36810D U MF1 38737319-38739325 1752 4/3 BnaCn.NRT1.8 BnaCnng78690D U LF 80520183-80521816 1167 3/2