用3种方法定位玉米萌发期和苗期的耐盐和耐碱相关性状QTL
张春宵,李淑芳,金峰学,刘文平,李万军,刘杰,李晓辉

QTL mapping of salt and alkaline tolerance-related traits at the germination and seedling stage in maize (Zea mays L.) using three analytical methods
Chun-Xiao ZHANG,Shu-Fang LI,Feng-Xue JIN,Wen-Ping LIU,Wan-Jun LI,Jie LIU,Xiao-Hui LI
附表1 基于CIM模型的耐盐、耐碱 QTL定位
Supplementary table 1 QTL mapping of salt and alkali tolerance-related traits based on CIM model
QTL 性状
Trait		 处理
Treatment		 染色体
Chr.		 位置
Position (cM)		 左标记
Left marker		 右标记
Right marker		 置信区间
LOD		 加性效应
Additive		 贡献率
R2
qGP-1-2 GP N 1 118.1 SYN15309 SYN25375 3.26 0.54 2.40
qGP-3-2 GP N 3 52.4 PZE-103034323 SYN31233 8.01 -0.50 3.00
qGP-4-4 GP N 4 34.1 PZE-104022472 PZE-104023120 4.28 0.90 9.30
qGP-5-4 GP N 5 118.5 PZE-105156153 PZE-105116507 7.85 -0.85 4.13
qGP-7-3 GP N 7 78.5 PZE-107136612 SYN18602 2.64 -0.46 6.55
qGP-2-3 GP S 2 64.8 PZE-102076037 SYN36641 4.44 1.04 9.07
qGP-5-1 GP S 5 12.3 SYN3124 SYN29224 3.67 -0.29 4.57
qGP-5-2 GP S 5 67.0 PUT-163a-148940529-435 PZE-105164922 2.58 0.02 2.05
qGP-8-1 GP S 8 33.8 PZE-108018114 PZE-108020824 2.81 -0.36 5.06
qGP-1-3 GP A 1 121.5 SYN36600 PZE-101199598 5.12 0.50 3.60
qGP-2-1 GP A 2 37.8 SYN8349 PZE-102179936 3.83 0.53 9.56
qGP-4-1 GP A 4 0.0 PZE-104000045 PUT-163a-50332311-2217 2.63 -0.47 5.59
qGP-7-2 GP A 7 21.9 PZE-107017584 PZE-107020326 6.53 0.73 16.02
qPH-1-2 PH N 1 81.4 PZE-101060842 SYN29464 2.61 -0.82 5.47
qPH-2-3 PH N 2 81.2 SYN30561 SYN11378 4.08 -0.72 5.95
qPH-3-4 PH N 3 55.3 PZE-103139096 PZE-103044762 3.08 -0.71 2.70
qPH-6-1 PH N 6 1.0 SYN11566 PUT-163a-74244759-3691 2.73 4.12 8.19
qPH-9-4 PH N 9 37.1 PZE-109061069 PZE-109066188 3.53 1.66 9.59
qPH-1-1 PH S 1 23.0 PZE-101117015 SYN11490 2.61 -1.76 5.58
qPH-6-3 PH S 6 104.0 SYN27121 PZE-106115356 3.33 1.43 7.16
qPH-8-3 PH S 8 33.8 PZE-108018114 PZE-108020824 4.64 1.55 11.43
qPH-9-5 PH S 9 37.1 PZE-109061069 PZE-109066188 3.68 1.70 6.26
qPH-2-2 PH A 2 66.7 PZE-102050753 PZB02035.2 2.68 -0.80 4.75
qPH-3-1 PH A 3 7.2 SYN39155 SYN15340 3.58 -0.29 2.65
qPH-5-1 PH A 5 33.6 SYN1390 SYN34468 3.05 1.48 7.17
qPH-8-2 PH A 8 30.2 SYN20702 PZE-108016333 5.47 1.50 5.27
qPH-10-1 PH A 10 59.5 PZE-110075434 PZE-110111417 6.64 3.08 8.10
qFW-1-3 FW N 1 130.3 SYN13476 SYN30022 2.96 0.98 3.43
qFW-3-6 FW N 3 59.3 PZE-103139096 PZE-103044762 2.69 -1.90 26.16
qFW-6-1 FW N 6 77.2 PZE-106074560 PZE-106075137 2.94 -0.70 5.16
qFW-7-2 FW N 7 39.9 SYN29953 SYN18186 4.49 -1.02 10.65
qFW-9-2 FW N 9 36.1 PZE-109038570 SYN30924 3.90 1.21 5.83
qFW-3-1 FW S 3 4.2 SYN772 SYN39155 2.73 1.05 4.06
qFW-9-7 FW S 9 37.1 PZE-109061069 PZE-109066188 4.03 1.33 11.16
qFW-10-1 FW S 10 57.6 PZE-110002524 PZE-110075434 4.74 -1.86 2.49
qFW-1-1 FW A 1 5.0 PZE-101117015 SYN11490 3.06 3.45 25.45
qFW-2-2 FW A 2 68.1 PZB02035.2 PZE-102046959 6.61 -0.57 8.51
qFW-3-2 FW A 3 8.2 SYN39155 SYN15340 2.83 -0.34 3.37
qFW-3-5 FW A 3 57.3 PZE-103139096 PZE-103044762 2.71 -0.38 2.89
qFW-3-7 FW A 3 107.0 SYN31043 SYN30138 2.95 0.89 5.16
qFW-5-1 FW A 5 117.5 PZE-105156153 PZE-105116507 3.46 -0.99 3.40
qFW-10-2 FW A 10 59.5 PZE-110075434 PZE-110111417 8.75 2.85 18.78
qDW-1-1 DW N 1 79.5 PZE-101058154 SYN11245 2.81 -0.61 4.60
qDW-1-5 DW N 1 130.9 PUT-163a-71766009-3502 SYN13025 4.01 0.81 8.07
qDW-3-5 DW N 3 58.3 PZE-103139096 PZE-103044762 2.58 -1.33 16.57
qDW-6-2 DW N 6 77.2 PZE-106074560 PZE-106075137 3.37 -0.40 4.61
qDW-7-1 DW N 7 32.4 PZE-107065747 PZE-107068965 4.55 -0.71 11.44
qDW-2-1 DW S 2 1.4 SYN30559 SYN17595 2.81 2.93 7.34
qDW-8-1 DW S 8 33.8 PZE-108018114 PZE-108020824 2.53 0.68 6.95
qDW-2-3 DW A 2 68.1 PZB02035.2 PZE-102046959 2.69 -0.34 5.05
qDW-3-1 DW A 3 7.2 SYN39155 SYN15340 3.68 -0.30 5.70
qDW-3-2 DW A 3 12.3 SYN10329 SYN31006 3.19 -0.39 5.80
qDW-6-1 DW A 6 22.6 PZE-106010873 PZE-106021096 3.22 -0.17 2.97
qDW-8-5 DW A 8 59.5 PZE-108103951 PZE-108073114 3.88 2.21 24.44
qDW-10-1 DW A 10 58.5 PZE-110002524 PZE-110111417 9.31 1.46 2.51
qTWC-5-1 TWC N 5 53.4 PZE-105134931 PZE-105146550 3.01 -1.20 7.84
qTWC-5-5 TWC N 5 119.5 PZE-105156153 PZE-105116507 3.96 -4.43 9.93
qTWC-7-1 TWC N 7 17.7 SYN9669 PZE-107016614 3.64 -1.14 4.88
qTWC-3-2 TWC S 3 38.4 PZE-103034323 SYN31233 7.32 0.21 2.03
qTWC-7-2 TWC S 7 17.7 SYN9669 PZE-107016614 6.41 0.17 2.74
qTWC-9-2 TWC S 9 40.3 PZE-109070385 PZE-109072991 3.20 0.35 10.31
qTWC-2-1 TWC A 2 66.7 PZE-102050753 PZB02035.2 2.74 -1.23 4.26
qTWC-3-4 TWC A 3 88.7 PUT-163a-60351350-2652 PZE-103149597 4.45 3.11 12.83
qTWC-5-2 TWC A 5 75.3 PZE-105166634 PZE-105180267 3.30 -2.57 8.93
qSNC-2-4 SNC S 2 42.6 PZE-102176758 PZE-102175663 3.48 -3.85 2.34
qSNC-3-2 SNC S 3 25.8 PZE-103028604 PZE-103029988 2.71 -4.30 7.78
qSNC-3-4 SNC S 3 34.0 PZE-103049728 PZE-103050226 2.70 -3.85 6.59
qSNC-1-3 SNC A 1 146.6 SYN11155 SYN3285 3.12 3.84 4.33
qSNC-2-2 SNC A 2 8.3 SYN30559 SYN17595 4.70 6.38 13.78
qSNC-3-5 SNC A 3 98.2 SYN25148 PZE-103161091 3.28 -4.48 6.99
qSNC-4-1 SNC A 4 109.1 SYN1804 SYN21539 3.63 -1.95 8.23
qSNC-10-1 SNC A 10 11.6 PZE-110052763 PZE-110037004 2.75 3.35 2.07
qSKC-1-1 SKC N 1 60.0 SYN35792 PZE-101032517 2.93 12.79 8.04
qSKC-4-3 SKC N 4 52.8 PZE-104102175 SYN1845 2.86 -12.01 7.64
qSKC-4-4 SKC S 4 54.9 PZE-104108744 SYN14363 2.74 -7.15 3.07
qSKC-5-1 SKC A 5 14.2 SYN37537 PZE-105022648 2.58 -1.45 4.46
qSKC-5-2 SKC A 5 67.0 PUT-163a-148940529-435 PZE-105164922 3.64 -4.49 9.48
qSKC-5-3 SKC A 5 79.8 PZE-105180266 SYN31311 3.29 3.42 10.38
qSKC-9-1 SKC A 9 31.9 PZE-109019058 PZE-109016576 2.69 -1.13 4.47
qSKC-10-1 SKC A 10 35.7 PZE-110001452 PZE-110002524 2.73 -0.73 2.10
qNKR-4-1 NKR N 4 27.9 SYN33243 PZE-104018854 10.86 -0.10 3.30
qNKR-5-2 NKR N 5 100.4 PZE-105163718 PZE-105156153 17.94 0.14 2.33
qNKR-1-1 NKR S 1 77.1 SYN24238 SYN36556 2.67 0.88 4.75
qNKR-6-2 NKR S 6 90.6 PZB00942.1 PZE-106088503 3.19 0.68 5.86
qNKR-6-3 NKR S 6 112.1 SYN31997 SYN10686 2.57 0.97 7.05
qNKR-7-2 NKR S 7 72.2 PZE-107127296 PUT-163a-94475607-4877 4.54 1.27 11.02
qNKR-4-2 NKR A 4 71.3 SYN19936 PZE-104152590 2.65 0.21 3.84
qSTR-1-1 STR S 1 42.2 SYN6209 PZE-101027182 2.84 -1.59 5.56
qSTR-1-3 STR S 1 90.7 PZE-101090700 SYN21374 2.73 1.63 5.97
qSTR-2-1 STR S 2 69.0 PZE-102047695 PZE-102047388 3.11 1.22 7.32
qSTR-8-3 STR S 8 39.8 PZE-108028788 PZE-108060116 3.35 -1.57 2.73
qATR-2-1 ATR A 2 72.4 SYN26838 SYN9944 2.66 0.93 3.12
qATR-3-3 ATR A 3 107.0 SYN31043 SYN30138 6.34 -3.46 4.61
qATR-5-1 ATR A 5 32.1 SYN35104 PZE-105105471 3.34 -2.83 7.23
qATR-5-2 ATR A 5 39.9 PZA00300.16 PZE-105110447 2.74 -2.74 6.72