利用WGCNA鉴定非生物胁迫相关基因共表达网络

李旭凯,李任建,张宝俊

Identification of rice stress-related gene co-expression modules by WGCNA

Xu-Kai LI,Ren-Jian LI,Bao-Jun ZHANG

表3 多种胁迫调控基因功能注释

Table 3 Annotation of functions of various stress regulating genes

候选基因 Candidate gene 转录因子 Transcription factor 冷胁迫 Cold 干旱 Drought 盐 Salt LOC_Os11g05160 AT-hook蛋白 AT-hook content nuclear localized protein AT-hook蛋白 AT-hook content nuclear localized protein AT-hook蛋白 AT-hook content nuclear localized protein LOC_Os03g17700 丝裂原活化蛋白激酶 Mitogen-activated protein kinase 丝裂原活化蛋白激酶 Mitogen-activated protein kinase 丝裂原活化蛋白激酶 Mitogen-activated protein kinase LOC_Os01g66120 NAC NAC转录因子 NAC domain transcription factor NAC转录因子 NAC domain transcription factor NAC转录因子 NAC domain transcription factor LOC_Os03g12820 SRO蛋白基因 Similar to RCD1 gene SRO蛋白基因 Similar to RCD1 gene 候选基因 Candidate gene 转录因子 Transcription factor 冷胁迫 Cold 干旱 Drought 盐 Salt LOC_Os03g60560 C2H2 TFIIIA型锌指蛋白基因 TFIIIA-type zinc finger protein gene TFIIIA型锌指蛋白基因 TFIIIA-type zinc finger protein gene LOC_Os02g33820 ABA-胁迫-成熟诱导基因 ABA, stress, ripening gene ABA-胁迫-成熟诱导基因 ABA, stress, ripening gene LOC_Os07g39870 TFIIIA型锌指蛋白基因 TFIIIA-type zinc finger protein gene TFIIIA型锌指蛋白基因 TFIIIA-type zinc finger protein gene LOC_Os06g36670 ABA受体 Pyrabactin resistance-like abscisic acid receptor ABA受体 Pyrabactin resistance-like abscisic acid receptor LOC_Os06g43660 液泡膜质子转运无机焦磷酸酶 H+-pyrophosphatase in tonoplasts 液泡膜质子转运无机焦磷酸酶 H+-pyrophosphatase in tonoplasts LOC_Os07g03710 病程相关蛋白 Pathogenesis-related protein 1a 病程相关蛋白 Pathogenesis-related protein 1a LOC_Os02g03410 钙依赖性蛋白激酶 Calcium-dependent protein Kinase 钙依赖性蛋白激酶 Calcium-dependent protein kinase LOC_Os03g53200 钙调素 Calmodulin 钙调素 Calmodulin LOC_Os08g39450 A20/AN1型锌指蛋白 A20/AN1 zinc-finger protein A20/AN1型锌指蛋白 A20/AN1 zinc-finger protein LOC_Os01g74410 MYB MYB转录因子 MYB family transcription factor MYB转录因子 MYB family transcription factor LOC_Os02g52780 bZIP bZIP转录因子 bZIP transcription factor bZIP转录因子 bZIP transcription factor LOC_Os03g60080 NAC 胁迫响应的NAC转录因子 基因 Stress-responsive NAC 1 胁迫响应的NAC转录因子 基因 Stress-responsive NAC 1 LOC_Os02g52780 bZIP bZIP转录因子 bZIP transcription factor bZIP转录因子 bZIP transcription factor LOC_Os11g08210 NAC NAC转录因子 NAC domain transcription factor NAC转录因子 NAC domain transcription factor LOC_Os04g50060 GRAS GRAS转录因子 GRAS transcription factor gene GRAS转录因子 GRAS transcription factor gene LOC_Os01g74410 MYB MYB转录因子 MYB family transcription factor MYB转录因子 MYB family transcription factor LOC_Os03g53200 钙调蛋白 Calmodulin 钙调蛋白 Calmodulin LOC_Os02g50970 丝裂原活化蛋白激酶 Mitogen-activated protein kinase 丝裂原活化蛋白激酶Mitogen-activated protein kinase 候选基因 Candidate gene 转录因子 Transcription factor 冷胁迫 Cold 干旱 Drought 盐 Salt LOC_Os07g03710 病程相关蛋白 Pathogenesis-related protein 1a 病程相关蛋白 Pathogenesis-related protein 1a LOC_Os01g32660 丝裂原活化蛋白激酶 Mitogen activated protein kinase 丝裂原活化蛋白激酶 Mitogen activated protein kinase LOC_Os01g73770 ERF AP2/EREBP转录因子基因 AP2/EREBP transcription factor gene AP2/EREBP转录因子基因 AP2/EREBP transcription factor gene