利用WGCNA鉴定非生物胁迫相关基因共表达网络

李旭凯,李任建,张宝俊

Identification of rice stress-related gene co-expression modules by WGCNA

Xu-Kai LI,Ren-Jian LI,Bao-Jun ZHANG

图3 冷、干旱、盐胁迫相关的共表达网络 图中点的大小表示输入基因在网络中的权重值大小, 红色表示属于该共表达网络的核心基因, 紫色菱形表示注释到的转录因子, 粉色菱形表示既注释到转录因子又属于网络中的核心基因。A: 模块darkmagenta中与冷胁迫相关的基因共表达网络; B: 模块lightgreen中与干旱胁迫相关的基因共表达网络; C: 模块lightgreen中与盐胁迫相关的基因共表达网络。

Fig. 3 Coexpression network related to cold, drought, and salt stress The size of dots in the graph indicates the weight of the input gene in the network. Red represents the core gene belonging to the co-expression network. The purple diamond indicates the annotated transcription factor, and the pink diamond indicates the core gene that is both annotated to the transcription factor and belongs to the network. A: Module darkmagenta coexpression network of genes related to cold stress; B: Module lightgreen is a co-expression network of genes related to drought stress; C: Gene co-expression network related to salt stress in module lightgreen.