甘蓝型油菜每角粒数的全基因组关联分析

孙程明,陈锋,陈松,彭琦,张维,易斌,张洁夫,傅廷栋

Genome-wide association study of seed number per silique in rapeseed (Brassica napus L.)

Cheng-Ming SUN,Feng CHEN,Song CHEN,Qi PENG,Wei ZHANG,Bin YI,Jie-Fu ZHANG,Ting-Dong FU

表3 GLM每角粒数显著关联位点

Table 3 Significant GWAS loci of seed number per silique in GLM

标记 Marker 染色体 Chr. 位置 Position -lg (P) 表型变异 R2 (%) 环境 Environment 已报道QTL Reported QTL Bn-A01-p3904495 A01 3,530,446 5.05 0.0357 16TZ [5] Bn-A04-p10393460 A04 11,537,744 5.79 0.0408 15TZ Bn-A07-p9916502 A07 11,196,091 4.50 0.0404 BLUP Bn-A07-p22251229 A07 23,650,401 4.41 0.0322 15TZ Bn-A08-p14749618 A08 12,312,967 4.74 0.0327 15TZ [7] Bn-scaff_15838_1-p1554155 C01 1,926,096 4.41 0.0437 16TZ [8] Bn-scaff_15936_1-p270915 C01 36,405,870 5.13 0.0353 BLUP [5-6] Bn-scaff_15712_6-p1336179 C02 38,045,422 4.66 0.0435 16TZ Bn-scaff_23954_1-p635109 C03 11,205,203 4.78 0.0330 15TZ Bn-scaff_16027_1-p367097 C04 1,254,637 4.62 0.0365 15TZ Bn-scaff_23907_1-p3780 C04 7,268,977 5.59 0.0483 15TZ,BLUP Bn-scaff_19253_1-p524524 C04 15,606,945 4.29 0.0290 BLUP Bn-scaff_15936_1-p357665 C05 9,508,115 4.78 0.0453 BLUP Bn-scaff_16064_1-p1144443 C06 24,511,029 4.74 0.0327 15TZ Bn-scaff_17484_1-p132976 C07 5,857,563 4.60 0.0317 15TZ Bn-scaff_20084_1-p104549 C07 9,638,283 5.36 0.0375 15TZ Bn-scaff_16069_1-p1651456 C07 38,070,340 5.23 0.0365 15TZ Bn-scaff_16069_1-p3780494 C07 40,184,749 4.35 0.0302 16TZ Bn-scaff_15808_1-p420800 C09 37,129,614 5.15 0.0365 16TZ [5] Bn-scaff_15576_1-p74980 C09 41,126,168 4.35 0.0303 16TZ [5,19]