利用2个F2群体整合中国豌豆高密度SSR遗传连锁图谱

刘荣, 王芳, 方俐, 杨涛, 张红岩, 黄宇宁, 王栋, 季一山, 徐东旭, 李冠, 郭瑞军, 宗绪晓

An integrated high-density SSR genetic linkage map from two F2 population in Chinese pea

Rong LIU, Fang WANG, Li FANG, Tao YANG, Hong-Yan ZHANG, Yu-Ning HUANG, Dong WANG, Yi-Shan JI, Dong-Xu XU, Guan LI, Rui-Jun GUO, Xu-Xiao ZONG

附表2 豌豆遗传连锁图谱上共有标记BLAST比对结果

Supplementary table 2 BLAST results of common markers on genetic linkage maps of pea

标记名称Marker name 连锁群Linkage group 染色体/连锁群 Chromosome/LG 比对条数 Number of blast results 最小E-value The minimal of E-value 最高比对率 The maximal identifies (%) 起始位置 Start position 终止为止 End position 比对长度Mapped length 整合图谱 Integrated map PSP1 G0003973 × G0005527 PSP2 W6-22600×W6-15174) 20229 I I I chr2LG1 20 6.7E-94 100 21,564,671 21,564,851 180 25334 I I I chr2LG1 4 2.7E-70 100 329,941,758 329,941,897 139 23261 I I I chr2LG1 1 1.7E-79 100 410,201,631 410,201,786 155 24301 II II II chr6LG2 1 3.9E-58 96 44,747,008 44,747,143 135 28257 II II II chr6LG2 1 3.5E-55 93 89,359,789 89,359,941 152 17754 II II II chr6LG2 1 3.0E-85 99 284,992,981 284,993,149 168 25769 II II II chr6LG2 17 3.9E-58 95 379,342,213 379,342,360 147 25792 II II II chr6LG2 3 6.5E-121 93 430,274,319 430,274,608 289 26850 III III III chr5LG3 1 4.5E-80 99 95,945,216 95,945,375 159 21726 III III III chr5LG3 2 4.4E-80 100 105,392,839 105,392,995 156 25151 III III III chr5LG3 31 4.4E-80 100 128,426,677 128,426,833 156 18135 III III III chr5LG3 1 8.3E-59 100 157,545,697 157,545,816 119 22754 III III III chr5LG3 3 2.2E-82 100 178,517,012 178,517,172 160 20075 III III III chr5LG3 1 6.6E-45 95 255,763,443 255,763,559 116 29630 IV IV IV chr4LG4 1 2.3E-97 100 77,755,735 77,755,921 186 28304 IV IV IV chr4LG4 4 5.8E-64 99 77,763,197 77,763,328 131 27275 IV IV IV chr4LG4 5 1.1E-58 94 144,374,211 144,374,362 151 24036 IV IV IV chr4LG4 1 1.5E-102 100 298,729,278 298,729,473 195 19487 IV IV IV chr4LG4 2 3.6E-92 100 329,433,230 329,433,407 177 21622 IV IV IV chr4LG4 1 1.0E-69 100 411,138,053 411,138,191 138 24907 IV IV IV chr4LG4 1 7.5E-67 100 441,578,306 441,578,439 133 23829 V V V chr3LG5 4 2.8E-104 100 40,897,218 40,897,416 198 25618 V V V chr3LG5 10 8.7E-101 99 91,875,171 91,875,372 201 25986 V V V chr3LG5 1 9.0E-56 91 181,332,864 181,333,028 164 16914 V V V chr3LG5 1 2.2E-45 89 191,073,596 191,073,747 151 22325 V V V chr3LG5 1 5.4E-91 98 221,771,656 221,771,845 189 23759 V V V chr3LG5 1 4.4E-80 100 276,140,552 276,140,708 156 24326 VI VI VI chr1LG6 1 3.3E-96 100 30,662,379 30,662,563 184 25075 VI VI VI chr1LG6 1 1.0E-92 98 46,237,147 46,237,342 195 29246 VI VI VI chr1LG6 2 5.0E-72 100 63,898,496 63,898,638 142 23568 VI VI VI chr1LG6 1 7.9E-63 100 339,601,745 339,601,871 126 25888 VI VI VI chr1LG6 1 4.1E-84 100 342,366,936 342,367,099 163 23431 VI VI VI chr1LG6 1 3.5E-73 100 359,154,849 359,154,993 144 21405 VII VII VII chr7LG7 1 4.0E-47 90 23,151,033 23,151,166 133 17431 VII VII VII chr7LG7 2 7.5E-94 98 28,469,955 28,470,153 198 19979 VII VII VII chr7LG7 1 8.3E-71 97 33,247,383 33,247,539 156 17666 VII VII VII chr7LG7 1 8.1E-71 97 33,247,466 33,247,619 153 25965 VII VII VII chr7LG7 1 7.5E-49 89 79,270,351 79,270,512 161 17384 VII VII VII chr7LG7 1 4.0E-103 100 86,051,350 86,051,546 196 29468 VII VII VII chr7LG7 1 3.9E-58 95 196,186,432 196,186,576 144 24503 VII VII VII chr7LG7 4 2.6E-52 91 201,461,481 201,461,642 161 17910 VII VII VII chr7LG7 1 2.0E-68 97 329,043,834 329,043,990 156 17980 VII VII VII chr7LG7 1 1.9E-94 98 474,504,396 474,504,591 195 29248 VII VII VII chr7LG7 1 7.2E-75 99 481,640,880 481,641,037 157 21796 VII VII VII chr7LG7 1 2.7E-97 97 488,671,955 488,672,158 203 18272 II II II scaffold00024 1 9.2E-59 98 43,943 44,076 133 23262 III III III scaffold03071 1 4.7E-95 100 151,557 151,739 182 28387 V V V scaffold03509 2 2.0E-105 100 40,828 41,028 200 21399 VII VII VII scaffold00916 1 8.8E-67 96 9,846 10,002 156 29620 VII VII VII scaffold01087 12 1.1E-54 96 47,702 47,832 130