亚洲棉短绒突变体纤维发育及其差异基因表达分析

王晓阳,王丽媛,潘兆娥,何守朴,王骁,龚文芳,杜雄明

Analysis of differentially expressed genes and fiber development in Gossypium arboreum fuzzless mutant

Xiao-Yang WANG,Li-Yuan WANG,Zhao-E PAN,Shou-Pu HE,Xiao WANG,Wen-Fang GONG,Xiong-Ming DU

表3 在fz和FZ两个材料中4个纤维发育时期91个共有的差异基因及其表达情况

Table 3 Ninety-one common significant DEGs found in fz and FZ across fiber development stages and their expression

基因编号 Gene ID 基因注释Gene annotation 0DPA +3DPA +5DPA +8DPA Ga11G2831 含有WD40结构的蛋白 WD40 repeat-like superfamily protein 2.00 2.70 3.00 1.72 Cotton_newGene_517935 假定蛋白 Hypothetical protein 2.55 2.94 1.88 1.84 Ga03G0324 谷胱甘肽S-转移酶 Glutathione S-transferase 1.33 1.65 1.63 1.05 Ga11G0115 假定蛋白 Hypothetical protein -1.25 -1.28 -1.42 -1.05 Ga07G1809 硫代硫酸盐ATP结合蛋白 Sulfate/thiosulfate ATP-binding protein 2.35 2.34 2.40 0.95 Cotton_newGene_190500 未鉴定蛋白 Uncharacterized protein 2.37 2.67 0.97 1.16 Cotton_newGene_217366 未鉴定蛋白 Uncharacterized protein 2.03 2.44 1.33 1.65 Ga11G3311 葡萄糖基转移酶 UDP-glycosyltransferase 83A1 1.25 1.98 1.50 1.85 Ga09G2202 乙烯响应因子 AP2/ERF 1.95 1.31 2.13 -1.42 Ga09G0608 亮氨酸拉链蛋白 Leucine-rich repeat protein kinase -1.90 -1.49 -0.70 -0.20 Cotton_newGene_190685 假定蛋白 Hypothetical protein 1.39 1.60 0.94 0.89 Cotton_newGene_184413 假定蛋白 Hypothetical protein 0.86 0.82 0.68 0.20 Cotton_newGene_216530 假定蛋白 Hypothetical protein 1.42 1.92 0.70 1.48 Ga06G0475 泛素连接酶 E3 ligase -0.74 -0.80 -0.53 -0.61 Cotton_newGene_206595 假定蛋白 Hypothetical protein 0.62 0.51 0.22 0.08 Cotton_newGene_188033 假定蛋白 Hypothetical protein -3.18 -2.89 -2.89 -1.50 Ga14G2119 谷氨酸受体 Glutamate receptor 3.94 3.27 3.11 1.92 Cotton_newGene_206588 假定蛋白 Hypothetical protein 2.13 2.00 1.73 0.92 Ga11G2832 自噬相关蛋白 Autophagy-related protein 2.42 2.45 2.66 1.38 Ga06G1674 锌依赖的包外多肽酶蛋白 Zn-dependent exopeptidases protein -1.22 -0.78 -0.75 -0.57 Cotton_newGene_313214 TMV抗性蛋白 TMV resistance protein 0.42 1.14 1.27 0.73 Ga04G1219 乙酰基葡萄糖转移酶 UDP-GlcNAc 1.21 1.37 1.40 0.78 Cotton_newGene_383086 ATP合成酶 ATP synthase 1.29 1.00 1.15 0.57 Cotton_newGene_336363 核酸内切酶 Endonuclease 1.47 1.00 1.30 0.46 Cotton_newGene_521387 功能未知 Unknown 1.87 1.81 1.73 1.36 Ga04G0915 功能未知 Unknown 1.43 1.30 1.23 0.32 Cotton_newGene_190683 细胞色素氧化酶 P450 Cytochrome P450 2.78 3.25 2.09 1.73 Cotton_newGene_94861 核酸酶 Putative nuclease -1.00 -0.86 -0.93 -0.65 Cotton_newGene_195900 功能未知 Unknown -3.47 -3.50 -3.45 -2.85 Ga10G0013 甲基转移酶 Histone-lysine N-methyltransferase 1.78 1.81 2.10 1.35 Ga11G0121 木糖梅 Alpha-xylosidase 1 -1.64 -0.77 -0.92 -1.26 Ga11G0187 假定蛋白 Hypothetical protein -0.85 -0.74 -0.81 -0.48 Ga11G0110 假定蛋白 Hypothetical protein 0.82 1.21 0.71 0.84 Ga06G1755 脯氨酸受体蛋白激酶Proline-rich receptor-like protein kinase -1.00 -0.52 -0.98 -0.95 Ga05G2954 天冬氨酸酶 Asparticase 0.65 0.58 1.25 0.24 Cotton_newGene_572274 假定蛋白 Hypothetical protein 2.24 2.62 1.48 1.69 Cotton_newGene_353692 假定蛋白 Hypothetical protein -0.56 -0.63 -0.71 -0.49 Cotton_newGene_483966 假定蛋白 Hypothetical protein 2.77 2.77 2.71 2.30 Ga11G0111 微丝蛋白 Fb17 -0.31 -0.75 -1.21 -2.11 Cotton_newGene_99176 丝氨酸/苏氨酸蛋白磷酸酶 Serine/threonine protein phosphatase 1.08 0.85 0.97 1.10 Ga12G1137 乙烯受体蛋白 AP2/ERF 1.25 1.53 1.81 -1.25 Ga11G2354 假定蛋白 Hypothetical protein 1.73 1.58 1.68 0.31 Cotton_newGene_517938 细胞色素氧化酶 P450 Cytochrome P450 4.11 4.65 3.60 3.14 Cotton_newGene_300782 核酸内切酶亚基 Endonuclease subunit 1.47 1.44 1.06 1.14 Cotton_newGene_252500 Copia型多蛋白 Copia-type polyprotein 2.74 2.88 2.52 2.00 Cotton_newGene_517934 功能未知 Unknown 3.19 3.84 2.65 1.73 Cotton_newGene_353671 缬氨酸-tRNA连接酶 Valine-tRNA ligase -0.39 -0.95 -0.65 -0.94 Ga05G3965 功能未知 Unknown -1.55 -1.24 -1.95 -1.34 Ga09G1652 丝氨酸/苏氨酸蛋白磷酸酶 Serine/threonine protein phosphatase -1.61 -1.34 -1.01 -1.25 Ga04G1773 转录因子 NAC1 1.20 0.98 2.02 -1.43 Ga09G1364 乙酰辅酶A氧化酶 Acyl-coenzyme A oxidase 2.66 2.52 2.53 2.06 Cotton_newGene_213765 假定蛋白 Hypothetical protein -1.28 -1.29 -1.89 -1.22 Ga04G0280 富含脯氨酸蛋白 Proline-rich protein 0.71 0.77 1.46 1.21 Cotton_newGene_217374 假定蛋白 Hypothetical protein 1.56 1.89 0.72 1.26 Ga10G0798 细胞壁受体激酶 Wall-associated receptor kinase 0.44 0.41 0.30 0.13 Ga03G0640 功能未知 Unknown 1.88 1.62 1.14 1.16 Cotton_newGene_577041 功能未知 Unknown 3.08 1.66 3.58 0.40 Ga07G1742 含有CBS结构域的蛋白 CBS domain-containing protein -1.45 -1.20 -1.17 -0.69 Ga07G2703 丝氨酸/苏氨酸蛋白磷酸酶 Serine/threonine-protein kinase -0.81 -0.59 -0.39 -0.26 Ga07G0566 转录因子 bHLH137 1.05 1.03 3.13 -0.50 Cotton_newGene_190686 假定蛋白 Hypothetical protein 1.42 1.61 0.84 0.86 Ga04G1342 未鉴定蛋白 Uncharacterized protein 0.80 0.30 0.17 0.37 Cotton_newGene_563611 未鉴定蛋白 Uncharacterized protein 2.35 2.52 1.44 1.83 Cotton_newGene_592029 丝裂原活化蛋白激酶 Mitogen-activated protein kinase MMK1 -1.65 -1.23 -0.87 -0.46 Ga01G1687 富含半胱氨酸/组氨酸蛋白 Cysteine/histidine-rich protein 0.74 0.58 0.54 0.48 Cotton_newGene_54250 功能未知 Unknown 2.88 2.87 2.67 1.88 Cotton_newGene_353710 假定蛋白 Hypothetical protein 1.50 1.25 1.10 1.44 Cotton_newGene_474685 未鉴定蛋白 Uncharacterized protein 2.45 2.75 1.40 1.79 Cotton_newGene_67170 假定蛋白 Hypothetical protein 3.06 2.61 2.59 1.44 Cotton_newGene_353674 芳香类多肽 Pentafunctional arom polypeptide 1.41 1.31 1.33 1.02 Ga03G1055 木聚糖糖基化酶 Xyloglucan endotransglucosylase 0.83 2.34 -1.71 0.96 Ga11G0123 甲硫氨酸tRNA转移酶 Methionine-tRNA ligase -2.16 -1.98 -1.73 -1.21 Ga07G0272 咖啡酸盐酯酶 Caffeoylshikimate esterase -1.59 -1.52 -1.82 -1.20 Cotton_newGene_57872 假定蛋白 Hypothetical protein 0.51 0.71 0.36 0.36 Ga03G2383 受体蛋白 Receptor -0.81 -1.43 -2.23 1.21 Ga02G0173 假定蛋白 Hypothetical protein 1.44 1.10 1.19 1.04 Cotton_newGene_509534 假定蛋白 Hypothetical protein 1.82 2.28 1.03 1.35 Ga11G0124 未鉴定蛋白 Uncharacterized protein -2.92 -4.04 -3.64 -3.84 Ga13G1311 丝氨酸/苏氨酸蛋白磷酸酶 Serine/threonine-protein phosphatase 1.80 1.60 1.61 1.42 Ga10G1419 NADH脱氢酶 NADH dehydrogenase -0.99 -1.20 -1.37 -1.31 Cotton_newGene_190499 未鉴定蛋白 Uncharacterized protein 1.30 1.60 0.80 0.91 Cotton_newGene_217363 假定蛋白 Hypothetical protein 1.69 2.16 0.97 1.75 Ga07G2215 未鉴定蛋白 Uncharacterized protein 1.38 2.23 -2.23 0.98 Ga11G2833 谷胱甘肽S-转移酶 Glutathione S-transferase 4.06 5.20 5.45 1.92 Cotton_newGene_473974 功能未知 Unknown 1.76 1.56 1.46 0.69 Ga07G0353 富含脯氨酸蛋白 Proline-rich protein 1.48 1.61 1.06 0.36 Cotton_newGene_99000 假定蛋白 Hypothetical protein 0.73 0.61 0.46 0.92 Ga07G1792 CBL9 -1.33 -1.33 -1.07 -0.68 Cotton_newGene_190497 假定蛋白 Hypothetical protein 2.55 2.89 2.28 1.86 Ga09G1540 蛋白YLS9 YLS9 protein 0.88 1.12 -0.82 0.66 Ga09G1216 川芎嗪-3 Tetraspanin-3 -1.02 -1.53 -0.94 -2.15