利用WGCNA鉴定棉花抗黄萎病相关基因共表达网络

傅明川,李浩,陈义珍,柳展基,刘任重,王立国

Identification of co-expressed modules of cotton genes responding to Verticillium dahliae infection by WGCNA

Ming-Chuan FU,Hao LI,Yi-Zhen CHEN,Zhan-Ji LIU,Ren-Zhong LIU,Li-Guo WANG

图6 抗病相关特异性模块内的基因共表达网络 点的大小和深浅代表该基因在网络中连通性的高低。转录因子用三角形表示, 其他基因用圆形表示。a: Black模块内的基因共表达网络。b: Mediumpurple3模块内的基因共表达网络。c: Darkolivegreen模块内的基因共表达网络。d: Plum3模块内的基因共表达网络。e: Mediumpurple2模块内的基因共表达网络。

Fig. 6 Gene co-expression networks of the specific modules which significantly associated with V. dahliae infection The genes with higher connectivity in the corresponding network are shown with larger circle sizes and darker colors. The transcription factors are indicated by triangles, with other genes being indicated by circles. a: Gene co-expression network of the black module. b: Gene co-expression network of the mediumpurple3 module. c: Gene co-expression network of the darkolivegreen module. d: Gene co-expression network of the plum3 module. e: Gene co-expression network of the mediumpurple2 module.