大麦籽粒β-葡聚糖含量的全基因组关联分析
|
|
耿腊, 黄业昌, 李梦迪, 谢尚耿, 叶玲珍, 张国平
|
Genome-wide association study of β-glucan content in barley grains
|
|
GENG La, HUANG Ye-Chang, LI Meng-Di, XIE Shang-Geng, YE Ling-Zhen, ZHANG Guo-Ping
|
|
表2 MLM模型下β-葡聚糖含量显著相关的SNP位点(-log10(P) > 3)
|
Table 2 SNP markers significantly associated with β-glucan content in MLM model
|
|
标记编号
MTA No. | 标记名称
Marker | 染色体
Chr. | 位置
Position | 峰值
-log10(P) | 表型贡献率
R2 (%) | 环境
Environment | 最佳等位基因a
SNP a | 最小等位基因频率
MAF | 候选基因
Putative candidated
genes | | 1 | M-4172115 | 2 | 753357365 | 3.50 | 16.98 | CHX | A/G | 0.14 | HORVU2Hr1G122510, HORVU2Hr1G122540,
HORVU2Hr1G122560, HORVU2Hr1G122570,
HORVU2Hr1G122580 | | 2 | M-3262394 | 3 | 640508648 | 3.16 | 13.50 | CX | A/G | 0.12 | HORVU3Hr1G092890 | | 3 | M-3432496 | 4 | 629360418 | 3.07 | 13.55 | CHX | C/T | 0.14 | HORVU4Hr1G084590 | | 4 | M-3924095 | 5 | 116486105 | 3.28
3.22 | 14.20
14.40 | CX
CHX | A/G | 0.07 | HORVU5Hr1G022710 | | 5 | M-3263056 | 6 | 68979147 | 3.88 | 13.65 | CHX | G/T | 0.05 | HORVU6Hr1G022070, HORVU6Hr1G022080 | | 6 | M-4792001 | 6 | 350443314 | 3.19 | 15.62 | CHX | C/G | 0.11 | HORVU6Hr1G055090 | | 7 | M-3911599 | 7 | 93157425 | 3.29 | 14.13 | CHX | A/C | 0.05 | HORVU7Hr1G038040, HORVU7Hr1G038060,
HORVU7Hr1G038070, HORVU7Hr1G038080 | | 8 | M-3665085 | 7 | 199549260 | 3.44 | 14.79 | CHX | A/G | 0.17 | HORVU7Hr1G052390, HORVU7Hr1G052400 |
|
|
|