叉柱棉sHSP基因家族的鉴定与特征分析

范凯, 潘鑫峰, 毛志君, 叶方婷, 李兆伟, 林伟伟, 林文雄

Identification and analysis of sHSP gene family in Gossypioides kirkii

FAN Kai, PAN Xin-Feng, MAO Zhi-Jun, YE Fang-Ting, LI Zhao-Wei, LIN Wei-Wei, LIN Wen-Xiong

表1 本研究中GksHSP成员的鉴定以及结构分析

Table 1 Identification and structural analysis of GksHSP in this study

名称 Name 位点名称 Locus name 亚家族 Subfamily 蛋白质长度 Protein length (aa) 分子量 Molecular weight (kD) 理论pI Theoretical pI α-螺旋 α-helix 延伸链 Extended strand β-折叠 β-turn 无规则卷曲 Random coil GksHSP01 Kirkii_Version3_Juiced.00g028900 CP 144 16.32340 4.95 23 30 6 85 GksHSP02 Kirkii_Version3_Juiced.00g047410 CI 159 18.32872 5.98 28 29 11 91 GksHSP03 Kirkii_Version3_Juiced.00g056780 ER 187 21.44579 6.77 64 31 8 84 GksHSP04 Kirkii_Version3_Juiced.00g059950 CI 153 17.69095 5.35 34 28 7 84 GksHSP05 Kirkii_Version3_Juiced.00g085690 CII 159 18.01872 6.64 52 34 8 65 GksHSP06 Kirkii_Version3_Juiced.00g085700 CII 156 17.66154 6.62 53 38 11 54 GksHSP07 Kirkii_Version3_Juiced.00g091700 CI 156 17.91837 5.79 38 30 10 78 GksHSP08 Kirkii_Version3_Juiced.00g091710 CI 156 17.80026 6.18 36 29 9 82 GksHSP09 Kirkii_Version3_Juiced.00g092160 CI 133 14.79902 9.00 40 22 5 66 GksHSP10 Kirkii_Version3_Juiced.00g096000 MTII 246 27.95450 7.80 82 46 13 105 GksHSP11 Kirkii_Version3_Juiced.00g097580 CIII 102 11.37751 4.37 35 16 5 46 GksHSP12 Kirkii_Version3_Juiced.00g101120 CIV 139 15.76492 5.34 28 29 10 72 GksHSP13 Kirkii_Version3_Juiced.00g120690 CI 159 18.25460 6.18 20 34 10 95 GksHSP14 Kirkii_Version3_Juiced.00g120700 CI 159 18.19460 6.18 28 31 10 90 GksHSP15 Kirkii_Version3_Juiced.00g120710 CI 159 18.27965 6.64 29 32 8 90 GksHSP16 Kirkii_Version3_Juiced.00g134580 CIV 139 15.85984 4.61 30 34 6 69 GksHSP17 Kirkii_Version3_Juiced.00g136170 CII 159 18.18400 6.19 49 31 7 72 GksHSP18 Kirkii_Version3_Juiced.00g136180 CII 153 17.05883 8.59 53 40 9 51 GksHSP19 Kirkii_Version3_Juiced.00g184450 CI 156 17.82725 5.77 32 31 10 83 GksHSP20 Kirkii_Version3_Juiced.00g184460 CI 160 18.36475 6.18 39 33 8 80 GksHSP21 Kirkii_Version3_Juiced.00g184750 CI 135 14.96507 5.91 38 33 4 60 GksHSP22 Kirkii_Version3_Juiced.00g188220 CI 143 16.28479 9.22 25 28 7 83 GksHSP23 Kirkii_Version3_Juiced.00g193540 PX 165 18.81639 5.98 18 40 8 99 GksHSP24 Kirkii_Version3_Juiced.00g194110 CII 158 17.75257 5.97 51 34 11 62 GksHSP25 Kirkii_Version3_Juiced.00g209640 CP 232 25.77139 6.84 39 43 8 142 GksHSP26 Kirkii_Version3_Juiced.00g215570 CI 159 18.38593 5.83 30 30 10 89 GksHSP27 Kirkii_Version3_Juiced.00g230720 SINGLE 140 16.28668 5.39 28 26 10 76 GksHSP28 Kirkii_Version3_Juiced.00g244800 CI 163 18.52218 8.83 33 36 10 84 GksHSP29 Kirkii_Version3_Juiced.00g246020 CI 156 17.87539 6.76 27 39 10 80 GksHSP30 Kirkii_Version3_Juiced.00g256930 CI 144 16.53776 5.58 26 34 8 76 GksHSP31 Kirkii_Version3_Juiced.00g267060 CV 166 19.59569 6.33 57 39 17 53 GksHSP32 Kirkii_Version3_Juiced.00g273810 CI 93 10.50390 4.61 11 32 9 41 GksHSP33 Kirkii_Version3_Juiced.00g301400 PX 141 15.98226 6.92 24 36 10 71 GksHSP34 Kirkii_Version3_Juiced.00g331020 CP 230 25.96835 5.86 40 38 9 143 GksHSP35 Kirkii_Version3_Juiced.00g336540 MTI/CP 181 20.93121 6.23 61 35 10 75 GksHSP36 Kirkii_Version3_Juiced.00g336590 MTI/CP 327 36.83181 5.49 103 48 22 154 GksHSP37 Kirkii_Version3_Juiced.00g343620 CI 149 17.03446 7.83 30 35 9 75 GksHSP38 Kirkii_Version3_Juiced.00g375140 ER 184 20.66178 5.76 57 33 8 86 GksHSP39 Kirkii_Version3_Juiced.00g377690 CV 196 22.48230 5.45 44 40 17 95