叉柱棉sHSP基因家族的鉴定与特征分析

范凯, 潘鑫峰, 毛志君, 叶方婷, 李兆伟, 林伟伟, 林文雄

Identification and analysis of sHSP gene family in Gossypioides kirkii

FAN Kai, PAN Xin-Feng, MAO Zhi-Jun, YE Fang-Ting, LI Zhao-Wei, LIN Wei-Wei, LIN Wen-Xiong

表2 通过MEME程序识别有关GksHSP成员的基序信息

Table 2 Motif information of GksHSPs through the MEME program

基序ID Motif ID 基序序列 Motif sequence 基序长度 Motif length (aa) MEME-1 RIDWKETPEAHVFKADVPGLKKEEVKVEVEDDRVLQISGERNVEKEDKNDT 51 MEME-2 NAKMDQIKASMEBGVLTVTVP 21 MEME-3 ERSSGKFMRRFRLPE 15 MEME-4 MAMIPSFFGNRRSSI 15 MEME-5 FDPFSLDVWDPFKDF 15 MEME-6 HVFKADLPGLKKEEVKVEVED 21 MEME-7 KLEVKKPDVKAIEIS 15 MEME-8 SLSTRSPETSAFVNA 15 MEME-9 MLDIPDETEKSPNAPSRAYVRDAKAMAAT 29 MEME-10 MEFPFPSDQHSPLYHYLLPSPPLFSNQLLPENHLNWTQTP 40 MEME-11 QQREGKKKDWRSCNWWEYGYVRRLELPZDADWRKIEAFLSNDVVLEIRIPRN 52 MEME-12 MDFRIMGFDSPLLHT 15 MEME-13 WTNRSYSSYBTSLQLPD 17 MEME-14 VLVIKGERKEE 11 MEME-15 QERAVEKRPKRLAMDVSPFGLLDPLSPMRSMRQMLDTMDRIFEDAMIFPGSNRRQGG 57 MEME-16 DWKETPEA 8 MEME-17 PFSVSFPSKNPCNSRLSVVRAZAAGDNNKDTSVDVHVNKDN 41 MEME-18 GSFYIDPADVPDRVEVLARAA 21 MEME-19 NIQIHVEKGKIMEIFGQ 17 MEME-20 RAPWDIKDGEH 11