利用动态转录组学挖掘大豆百粒重候选基因
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曾健, 徐先超, 徐昱斐, 王秀成, 于海燕, 冯贝贝, 邢光南
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Utilization of dynamic transcriptomics analysis for candidate gene mining of 100-seed weight in soybean
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ZENG Jian, XU Xian-Chao, XU Yu-Fei, WANG Xiu-Cheng, YU Hai-Yan, FENG Bei-Bei, XING Guang-Nan
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表1 SNPs/InDels过滤标准
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Table 1 SNPs/InDels filter standards
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SNPs过滤标准
SNPs filter standards | InDels过滤标准
InDels filter standards | | QualByDepth (QD) > 2.0 | QualByDepth (QD) > 2.0 | | RMSMappingQuality (MQ) > 40.0 | — | | FisherStrand (FS) < 60.0 | FisherStrand (FS) < 200.0 | | StrandOddsRatio (SOR) < 3.0 | StrandOddsRatio (SOR) < 10.0 | | MappingQualityRankSumTest (MQRankSum) > -12.5 | MappingQualityRankSumTest (MQRankSum) > -12.5 | | ReadPosRankSumTest (ReadPosRankSum) > -8.0 | ReadPosRankSumTest (ReadPosRankSum) > -8.0 |
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