利用动态转录组学挖掘大豆百粒重候选基因
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曾健, 徐先超, 徐昱斐, 王秀成, 于海燕, 冯贝贝, 邢光南
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Utilization of dynamic transcriptomics analysis for candidate gene mining of 100-seed weight in soybean
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ZENG Jian, XU Xian-Chao, XU Yu-Fei, WANG Xiu-Cheng, YU Hai-Yan, FENG Bei-Bei, XING Guang-Nan
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表2 SNPs/InDels分布区域
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Table 2 SNPs/InDels distributed region
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变异位置
Variation region | SNPs | InDels | 数目
Count | 比例
Percentage (%) | 数目
Count | 比例
Percentage (%) | | DOWNSTREAM | 41,636 | 23.67 | 5788 | 26.22 | | EXON | 72,950 | 41.48 | 3028 | 13.72 | | INTERGENIC | 2100 | 1.19 | 424 | 1.92 | | INTRON | 8576 | 4.88 | 1625 | 7.36 | | SPLICE_SITE_ACCEPTOR | 31 | 0.02 | 11 | 0.05 | | SPLICE_SITE_DONOR | 31 | 0.02 | 12 | 0.05 | | SPLICE_SITE_REGION | 334 | 0.19 | 69 | 0.31 | | TRANSCRIPT | — | — | 1 | 0.01 | | UPSTREAM | 29,780 | 16.93 | 4128 | 18.70 | | UTR_3_PRIME | 14,683 | 8.35 | 4400 | 19.94 | | UTR_5_PRIME | 5749 | 3.27 | 2586 | 11.72 |
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