马铃薯GAUT基因家族的全基因组鉴定及表达分析

牛娜, 刘震, 黄鹏翔, 朱金勇, 李志涛, 马文婧, 张俊莲, 白江平, 刘玉汇

Genome-wide identification and expression analysis of potato GAUT gene family

NIU Na, LIU Zhen, HUANG Peng-Xiang, ZHU Jin-Yong, LI Zhi-Tao, MA Wen-Jing, ZHANG Jun-Lian, BAI Jiang-Ping, LIU Yu-Hui

表3 StGAUT片段重复基因的Ka/Ks比值

Table 3 Ka/Ks ratios of tandemly and segmentally duplicated StGAUT

序号 No. 基因1 Gene 1 基因2 Gene 2 非同义替换率 Ka 同义替换率 Ks 非同义替换率/同义替换率 Ka/Ks P值 P-value 类型 Type 1 PG0001396 PG0022608 0.946754 1.20121 0.788168 4.76E-08 片段重复Segmental repeat 2 PG0024782 PG0031840 0.291121 3.40619 0.0854681 0 片段重复Segmental repeat 3 PG0003843 PG0014637 0.121239 1.39384 0.0869818 1.54E-98 片段重复Segmental repeat 4 PG0010088 PG0016880 0.179392 4.47249 0.0401102 0 片段重复Segmental repeat 5 PG0001183 PG0010088 0.0740382 2.24318 0.0330059 2.71E-125 片段重复Segmental repeat 6 PG0011479 PG0023500 0.103092 0.542081 0.190177 1.53E-47 片段重复Segmental repeat 7 PG0005216 PG0046135 0.264587 3.85123 0.0687019 0 片段重复Segmental repeat 8 PG0003522 PG0015490 0.103439 1.30535 0.0792418 1.55E-87 片段重复Segmental repeat 9 PG0014401 PG0019228 0.077988 0.755095 0.103282 3.94E-89 片段重复Segmental repeat 10 PG0001444 PG0025139 0.0574037 0.557829 0.102906 6.74E-66 片段重复Segmental repeat 11 PG0020103 PG0027950 0.957665 1.1718 0.817262 1.33E-05 片段重复Segmental repeat 12 PG0007896 PG2003179 0.172114 0.703844 0.244535 2.81E-54 片段重复Segmental repeat