基于多平台基因表达数据的水稻干旱和盐胁迫相关基因预测

刘亚文, 张红燕, 曹丹, 李兰芝

Prediction of drought and salt stress-related genes in rice based on multi-platform gene expression data

LIU Ya-Wen, ZHANG Hong-Yan, CAO Dan, LI Lan-Zhi

表1 水稻数据集

Table 1 Data set of rice

数据集 Data set 基因数 No. of genes 总样本数 Total samples 对照组样本数 Control samples 胁迫组样本数 Stress samples 干旱芯片数据 Drought stress-related affymetrix dataset (D_affy) 27,344 62 31 31 盐芯片数据 Salt stress-related affymetrix dataset (S_affy) 27,344 32 16 16 干旱RNA-seq数据 Drought stress-related RNA-seq dataset (D_rnaseq) 29,828 20 10 10 盐RNA-seq数据 Salt stress-related RNA-seq dataset (S_rnaseq) 28,425 22 11 11