锌胁迫下甘蓝型油菜发芽期下胚轴长的全基因组关联分析

魏丽娟, 申树林, 黄小虎, 马国强, 王曦彤, 杨怡玲, 李洹东, 王书贤, 朱美晨, 唐章林, 卢坤, 李加纳, 曲存民

Genome-wide association analysis reveals zinc-tolerant loci of rapeseed at germination stage

WEI Li-Juan, SHEN Shu-Lin, HUANG Xiao-Hu, MA Guo-Qiang, WANG Xi-Tong, YANG Yi-Ling, LI Huan-Dong, WANG Shu-Xian, ZHU Mei-Chen, TANG Zhang-Lin, LU Kun, LI Jia-Na, QU Cun-Min

表4 甘蓝型油菜锌胁迫下相关性状候选基因

Table 4 Candidate genes of the traits correlated with zinc stress treatment in B. napus

候选基因 Candidate genes 物理位置 Physical position 拟南芥同源基因 Homologs in Arabidopsis 基因注释 Gene annotation 差异倍数 log2 (Fold change) BnaA02g30040D Chr.A02: 21813781-21815282 AT5G48250 B-box型锌指蛋白 B-box type zinc finger protein with CCT domain 2.18 BnaA02g30270D Chr.A02: 21934212-21936672 AT5G48560 bHLH转录因子 Basic helix-loop-helix (bHLH) DNA-binding protein -6.62 BnaA07g27330D ChrA07: 19877781-19879164 AT1G68670 MYB转录因子 MYB-like transcription factor family protein 2.15 BnaA07g27340D Chr.A07: 19884616-19887579 AT1G68690 蛋白激酶家族 Protein kinase superfamily protein 4.55 BnaA07g27500D Chr.A07: 19996402-19997781 AT1G68850 过氧化物酶家族蛋白 Peroxidase superfamily protein -2.06 BnaA07g27840D Chr.A07: 20196357-20198149 AT1G69310 WRKY57转录因子 WRKY DNA-binding protein 57 2.64 BnaA07g28000D Chr.A07: 20266703-20267687 AT1G69490 NAC转录因子 NAC-like, activated by AP3/PI (NAP) 2.01 BnaA07g31860D Chr.A07: 22136736-22137327 AT1G74930 ERF转录因子 ORA47 3.71 BnaA07g34210D Chr.A07: 23311591-23312410 AT1G78360 谷胱甘肽转移酶 (GSTU21) Glutathione S-transferase TAU 21 (GSTU21) -3.13 BnaA07g35030D Chr.A07: 23695006-23698790 AT1G79610 Na+/H+逆向转运蛋白 Na+/H+ antiporter 6 (NHX6) 2.29 BnaA07g35090D Chr.A07: 23714116-23714860 AT1G79680 类细胞壁相关激酶WALL ASSOCIATED KINASE (WAK)-LIKE 10 (WAKL10) 6.52 BnaA07g35350D Chr.A07: 23800896-23801571 AT1G80730 锌指蛋白 Zinc-finger protein 1 (ZFP1) -7.08 BnaC04g06210D Chr.C04: 4439046-4439940 AT3G55090 ABC转运蛋白 ABC-2 type transporter family protein 2.10 BnaC04g06300D Chr.C04: 4503767-4505873 AT2G39210 主要协助转运蛋白超家族 Major facilitator superfamily protein (MFS) 3.11 BnaC06g38840D Chr.C06: 36254140-36254958 AT1G78360 谷胱甘肽转移酶(GSTU21) Glutathione S-transferase TAU 21 (GSTU21) -4.29 BnaC06g38850D Chr.C06: 36255467-36256984 AT1G78360 谷胱甘肽转移酶(GSTU21) Glutathione S-transferase TAU 21 (GSTU21) -2.35 BnaC06g39970D Chr.C06: 36849441-36853390 AT1G79610 Na+/H+逆向转运蛋白 Na+/H+ antiporter 6 (NHX6) 4.01 BnaC06g40020D Chr.C06: 36867031-36869575 AT1G69730 细胞壁相关激酶蛋白 Wall-associated kinase family protein 4.43 BnaC06g40250D Chr.C06: 36958965-36959628 AT1G80730 锌指蛋白 Zinc-finger protein 1 (ZFP1) -2.49