DNA甲基化参与调控马铃薯响应干旱胁迫的关键基因挖掘

李鹏程, 毕真真, 孙超, 秦天元, 梁文君, 王一好, 许德蓉, 刘玉汇, 张俊莲, 白江平

Key genes mining of DNA methylation involved in regulating drought stress response in potato

LI Peng-Cheng, BI Zhen-Zhen, SUN Chao, QIN Tian-Yuan, LIANG Wen-Jun, WANG Yi-Hao, XU De-Rong, LIU Yu-Hui, ZHANG Jun-Lian, BAI Jiang-Ping

表2 测序reads数比对到参考基因组的基本统计

Table 2 Basic summary of sequence and sequencing reads mapping to the reference genome

样品ID Sample ID 总reads数 Total reads 总碱基数 Total bases (G) GC含量 GC content (%) Q20 (%) Q30 (%) 比对率 Mapped reads (%) AtC_0h 132,318,050 19.85 44.33 99.93 96.45 82.13 AtA_2h 149,098,932 22.36 44.33 99.95 96.58 89.28 AtA_6h 157,099,124 23.56 44.50 99.94 96.40 84.40 AtA_12h 137,418,600 20.61 44.67 99.94 96.42 91.26 AtA_24h 146,797,368 22.02 45.67 99.95 96.59 91.93 AtM_2h 137,686,150 20.65 46.83 99.95 96.76 94.64 AtM_6h 147,166,226 22.07 45.67 99.91 96.45 79.18 AtM_12h 132,018,290 19.80 44.17 99.91 96.20 78.02 AtM_24h 143,830,794 21.57 44.83 99.94 96.43 87.10 QsC_0h 137,904,066 20.69 44.67 99.90 96.41 82.46 QsA_2h 133,480,780 20.02 45.67 99.93 96.68 92.56 QsA_6h 143,833,564 21.58 45.00 99.94 96.47 92.32 QsA_12h 150,781,586 22.62 44.67 99.93 96.41 84.35 QsA_24h 134,038,164 20.11 44.17 99.92 96.42 75.56 QsM_2h 145,819,266 21.87 44.83 99.92 96.43 81.50 QsM_6h 136,496,172 20.47 44.33 99.92 96.30 89.37 QsM_12h 130,599,502 19.59 44.50 99.93 96.40 85.07 QsM_24h 150,207,156 22.53 44.33 99.94 96.42 90.72