甘蔗割手密种类甜蛋白家族鉴定及栽培种同源基因功能分析

苏亚春, 李聪娜, 苏炜华, 尤垂淮, 岑光莉, 张畅, 任永娟, 阙友雄

Identification of thaumatin-like protein family in Saccharum spontaneum and functional analysis of its homologous gene in sugarcane cultivar

SU Ya-Chun, LI Cong-Na, SU Wei-Hua, YOU Chui-Huai, CEN Guang-Li, ZHANG Chang, REN Yong-Juan, QUE You-Xiong

表1 附SsTLP家族蛋白的二级结构预测

Table 1 Secondary structure prediction of SsTLP family proteins (%)

蛋白名称 Protein name α-螺旋 Alpha helix 延伸链 Extended strand 不规则卷曲 Random coil 蛋白名称 Protein name α-螺旋 Alpha helix 延伸链 Extended strand 不规则卷曲 Random coil SsTLP1 19.05 15.99 64.97 SsTLP62 18.70 15.65 65.65 SsTLP2 22.84 16.05 61.11 SsTLP63 19.20 16.52 64.29 SsTLP3 23.08 16.00 60.92 SsTLP64 24.92 14.20 60.88 SsTLP4 20.80 15.36 63.84 SsTLP65 23.91 14.91 61.18 SsTLP5 20.47 10.13 69.40 SsTLP66 24.68 14.24 61.08 SsTLP6 22.55 9.39 68.06 SsTLP67 14.78 20.27 64.95 SsTLP7 22.91 11.64 65.45 SsTLP68 18.28 15.93 65.80 SsTLP8 27.79 14.20 58.01 SsTLP69 9.36 22.81 67.84 SsTLP9 26.56 13.11 60.33 SsTLP70 9.25 18.50 72.25 SsTLP10 28.70 13.90 57.40 SsTLP71 14.90 18.51 66.59 SsTLP11 12.71 16.95 70.34 SsTLP72 9.25 20.23 70.52 SsTLP12 12.71 19.07 68.22 SsTLP73 9.25 18.50 72.25 SsTLP13 9.75 16.95 73.31 SsTLP74 7.76 19.59 72.65 SsTLP14 31.15 15.10 53.75 SsTLP75 10.33 13.65 76.01 SsTLP15 12.79 19.19 68.01 SsTLP76 7.83 21.08 71.08 SsTLP16 11.07 19.13 69.80 SsTLP77 19.74 12.45 67.81 SsTLP17 11.98 15.27 72.75 SsTLP78 26.61 20.97 52.42 SsTLP18 11.98 15.27 72.75 SsTLP79 18.11 22.83 59.06 SsTLP19 11.98 15.27 72.75 SsTLP80 17.86 15.87 66.27 SsTLP20 15.22 17.99 66.78 SsTLP81 18.18 15.81 66.01 SsTLP21 17.92 16.75 65.33 SsTLP82 17.93 16.33 65.74 SsTLP22 15.75 17.81 66.44 SsTLP83 29.07 17.85 53.08 SsTLP23 36.70 0.92 62.39 SsTLP84 27.04 9.92 63.04 SsTLP24 3.16 9.47 87.37 SsTLP85 40.50 13.76 45.74 SsTLP25 9.72 14.58 75.69 SsTLP86 30.54 17.06 52.41 SsTLP26 8.13 18.70 73.17 SsTLP87 24.23 11.01 64.76 SsTLP27 19.02 13.50 67.48 SsTLP88 24.23 11.45 64.32 SsTLP28 11.02 19.07 69.92 SsTLP89 9.68 21.51 68.82 SsTLP29 19.81 15.91 64.29 SsTLP90 9.68 21.51 68.82 SsTLP30 8.90 19.07 72.03 SsTLP91 9.95 23.56 66.49 SsTLP31 22.78 10.76 66.46 SsTLP92 40.49 10.56 48.94 SsTLP32 22.57 11.29 66.14 SsTLP93 13.21 22.86 63.93 SsTLP33 13.41 21.34 65.24 SsTLP94 11.99 20.97 67.04 SsTLP34 11.32 22.96 65.72 SsTLP95 13.93 22.14 63.93 SsTLP35 17.65 16.41 65.94 SsTLP96 15.88 21.30 62.82 SsTLP36 11.82 15.45 72.73 SsTLP97 29.09 18.18 52.73 SsTLP37 12.46 15.57 71.97 SsTLP98 29.77 16.54 53.70 SsTLP38 9.52 25.54 64.94 SsTLP99 12.30 21.72 65.98 SsTLP39 12.57 14.40 73.04 SsTLP100 15.31 20.66 64.03 SsTLP40 17.65 16.10 66.25 SsTLP101 12.40 24.79 62.81 SsTLP41 13.14 12.41 74.45 SsTLP102 12.40 24.79 62.81 SsTLP42 13.19 15.62 71.18 SsTLP103 13.69 12.03 74.27 SsTLP43 17.78 20.00 62.22 SsTLP104 16.59 14.75 68.66 SsTLP44 12.78 20.26 66.96 SsTLP105 16.33 11.16 72.51 SsTLP45 12.33 19.82 67.84 SsTLP106 17.30 16.98 65.72 SsTLP46 16.28 20.93 62.79 SsTLP107 26.99 21.17 51.84 SsTLP47 13.68 13.68 72.63 SsTLP108 31.53 12.77 55.71 SsTLP48 15.25 19.17 65.58 SsTLP109 16.48 19.48 64.04 SsTLP49 0.00 23.93 76.07 SsTLP110 19.45 17.33 63.22 SsTLP50 9.41 21.18 69.41 SsTLP111 29.23 12.69 58.08 SsTLP51 11.31 19.64 69.05 SsTLP112 28.46 13.46 58.08 SsTLP52 0.00 22.09 77.91 SsTLP113 22.94 13.98 63.08 SsTLP53 11.31 19.64 69.05 SsTLP114 17.74 20.97 61.29 SsTLP54 29.61 20.11 50.28 SsTLP115 21.26 20.47 58.27 SsTLP55 9.36 22.81 67.84 SsTLP116 18.95 21.37 59.68 SsTLP56 11.70 22.22 66.08 SsTLP117 22.68 18.85 58.47 SsTLP57 21.97 18.18 59.85 SsTLP118 22.36 18.85 58.79 SsTLP58 11.31 19.64 69.05 SsTLP119 20.39 16.50 63.11 SsTLP59 20.29 11.49 68.22 SsTLP120 19.09 16.50 64.40 SsTLP60 15.42 14.93 69.65 SsTLP121 17.13 10.36 72.51 SsTLP61 10.29 21.14 68.57 SsTLP122 21.45 14.55 64.00