小麦B-box基因家族全基因组鉴定与表达分析
|
|
王艳朋, 凌磊, 张文睿, 王丹, 郭长虹
|
Genome-wide identification and expression analysis of B-box gene family in wheat
|
|
WANG Yan-Peng, LING Lei, ZHANG Wen-Rui, WANG Dan, GUO Chang-Hong
|
|
附表1 B-box家族的基本信息分析
|
Table S1 TaBBX genes information identified in the wheat genome
|
|
基因名
Gene name | 基因登录号
Gene ID | 染色体位点
Chromosome location | 基因长度
Length (bp) | 氨基酸长度
Length (aa) | 等电点
Isoelectric point (pI) | 分子量
Molecular weight (kD) | 外显子个数
Exon number | 分组
Group | 结构域类型
Domain type | | TaBBX01 | TraesCS2A02G119600 | 2A:70102039-70104699 | 1149 | 382 | 5.73 | 40010.83 | 4 | Ⅲ | 1BBX + CCT | | TaBBX02 | TraesCS2A02G348900 | 2A:587750669-587751938 | 765 | 254 | 4.95 | 27209.52 | 2 | Ⅳ | 2BBX | | TaBBX03 | TraesCS2A02G353900 | 2A:594579959-594581671 | 951 | 316 | 5.56 | 33724.51 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX04 | TraesCS2A02G366100 | 2A:610710308-610712939 | 789 | 262 | 4.79 | 28237.51 | 2 | Ⅳ | 2BBX | | TaBBX05 | TraesCS2A02G388500 | 2A:635722864-635724553 | 777 | 258 | 5.82 | 27357.5 | 3 | Ⅳ | 2BBX | | TaBBX06 | TraesCS2B02G140300 | 2B:106954443-106956656 | 1164 | 387 | 5.44 | 40384.32 | 4 | Ⅲ | 1BBX + CCT | | TaBBX07 | TraesCS2B02G367300 | 2B:523760095-523761742 | 774 | 257 | 4.89 | 27492.85 | 2 | Ⅳ | 2BBX | | TaBBX08 | TraesCS2B02G372000 | 2B:530306217-530307895 | 960 | 319 | 5.56 | 33908.66 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX09 | TraesCS2B02G406600 | 2B:575903665-575905255 | 795 | 264 | 5.82 | 27823.99 | 3 | Ⅳ | 2BBX | | TaBBX10 | TraesCS2D02G121400 | 2D:70622968-70625567 | 1146 | 381 | 5.72 | 39968.91 | 4 | Ⅲ | 1BBX + CCT | | TaBBX11 | TraesCS2D02G347300 | 2D:445396017-445397519 | 777 | 258 | 4.81 | 27494.76 | 2 | Ⅳ | 2BBX | | TaBBX12 | TraesCS2D02G351900 | 2D:450234732-450236192 | 960 | 319 | 5.56 | 33936.74 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX13 | TraesCS2D02G386300 | 2D:491429370-491431171 | 789 | 262 | 5.82 | 27600.81 | 3 | Ⅳ | 2BBX | | TaBBX14 | TraesCS3A02G139300 | 3A:117227850-117230216 | 1050 | 349 | 5.15 | 37168.47 | 3 | Ⅳ | 2BBX | | TaBBX15 | TraesCS3B02G156900 | 3B:150154692-150156947 | 1050 | 349 | 5.22 | 37477.8 | 3 | Ⅳ | 2BBX | | TaBBX16 | TraesCS3D02G139600 | 3D:99748881-99751184 | 1050 | 349 | 5.32 | 37482.8 | 3 | Ⅳ | 2BBX | | TaBBX17 | TraesCS4A02G140600 | 4A:216145053-216148012 | 1239 | 412 | 5.5 | 45256.44 | 5 | Ⅲ | 1BBX + CCT | | TaBBX18 | TraesCS4A02G268500 | 4A:580733925-580736107 | 1233 | 410 | 5.85 | 44829.19 | 2 | Ⅱ | 1BBX + CCT | | TaBBX19 | TraesCS4B02G045700 | 4B:32896523-32898695 | 1236 | 411 | 6.04 | 44870.33 | 2 | Ⅱ | 1BBX + CCT | | TaBBX20 | TraesCS4B02G155800 | 4B:281732350-281735921 | 1194 | 397 | 6.06 | 43627.8 | 3 | Ⅲ | 1BBX + CCT | | TaBBX21 | TraesCS4D02G046200 | 4D:21774703-21776886 | 1233 | 410 | 5.85 | 44816.25 | 2 | Ⅱ | 1BBX + CCT | | TaBBX22 | TraesCS4D02G167300 | 4D:288428472-288432595 | 1194 | 397 | 6.1 | 43454.51 | 3 | Ⅲ | 1BBX + CCT | | TaBBX23 | TraesCS5A02G166100 | 5A:355071283-355072804 | 981 | 326 | 5.78 | 35576.36 | 2 | Ⅰ | 1BBX + CCT | | TaBBX24 | TraesCS5A02G317100 | 5A:528110873-528114741 | 636 | 211 | 5.74 | 23146.7 | 5 | Ⅳ | 2BBX | | TaBBX25 | TraesCS5A02G336000 | 5A:545058736-545059411 | 540 | 179 | 5.29 | 19206.94 | 2 | Ⅲ | 1BBX | | TaBBX26 | TraesCS5A02G336100 | 5A:545073760-545074317 | 441 | 146 | 4.57 | 15371.44 | 2 | Ⅲ | 1BBX | | TaBBX27 | TraesCS5A02G339000 | 5A:546563819-546564523 | 705 | 234 | 9.27 | 24319.82 | 1 | Ⅴ | 1BBX | | TaBBX28 | TraesCS5A02G339100 | 5A:546575974-546576576 | 603 | 200 | 10.42 | 21432.56 | 1 | Ⅴ | 1BBX | | TaBBX29 | TraesCS5B02G163500 | 5B:302753429-302754975 | 978 | 325 | 5.96 | 35477.32 | 2 | Ⅰ | 1BBX + CCT | | TaBBX30 | TraesCS5B02G317700 | 5B:501954375-501958483 | 636 | 211 | 5.85 | 23088.66 | 5 | Ⅳ | 2BBX | | TaBBX31 | TraesCS5B02G335200 | 5B:518472466-518473347 | 468 | 155 | 5 | 16721.09 | 2 | Ⅲ | 1BBX | | TaBBX32 | TraesCS5B02G335300 | 5B:518481548-518484145 | 1107 | 368 | 6.23 | 39645.26 | 4 | Ⅲ | 1BBX + CCT | | TaBBX33 | TraesCS5B02G337400 | 5B:520970152-520970850 | 699 | 232 | 9.02 | 24101.56 | 1 | Ⅴ | 1BBX | | TaBBX34 | TraesCS5B02G337500 | 5B:521031958-521032572 | 615 | 204 | 9.65 | 21590.87 | 1 | Ⅴ | 1BBX | | TaBBX35 | TraesCS5D02G170700 | 5D:267762539-267764201 | 978 | 325 | 5.96 | 35519.42 | 2 | 1 | 1BBX + CCT | | TaBBX36 | TraesCS5D02G323400 | 5D:415613354-415617623 | 636 | 211 | 5.85 | 23084.67 | 5 | Ⅳ | 2BBX | | TaBBX37 | TraesCS5D02G341000 | 5D:429289528-429291886 | 1083 | 360 | 6.33 | 38690.35 | 4 | Ⅲ | 1BBX + CCT | | TaBBX38 | TraesCS5D02G343300 | 5D:431251824-431252543 | 720 | 239 | 9.03 | 25267.96 | 1 | Ⅴ | 1BBX | | TaBBX39 | TraesCS6A02G143900 | 6A:121616223-121619829 | 645 | 214 | 4.72 | 22147.27 | 2 | Ⅳ | 2BBX | | TaBBX40 | TraesCS6A02G150900 | 6A:134947729-134949478 | 1095 | 364 | 5.68 | 37982.35 | 3 | Ⅰ | 2BBX+ CCT | | TaBBX41 | TraesCS6A02G216400 | 6A:398252913-398254425 | 771 | 256 | 5.14 | 27782.32 | 2 | Ⅳ | 2BBX | | TaBBX42 | TraesCS6A02G218900 | 6A:405166583-405168134 | 966 | 321 | 5.24 | 33625.42 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX43 | TraesCS6A02G239300 | 6A:449584187-449585880 | 711 | 236 | 5.77 | 25104.96 | 3 | Ⅳ | 2BBX | | TaBBX44 | TraesCS6A02G286400 | 6A:518666410-518670650 | 972 | 323 | 6.65 | 35122.47 | 3 | Ⅲ | 2BBX+ CCT | | TaBBX45 | TraesCS6A02G289400 | 6A:521451709-521454099 | 1110 | 369 | 5.91 | 41051.82 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX46 | TraesCS6A02G293200 | 6A:524718099-524720326 | 1281 | 426 | 6.81 | 46496.91 | 2 | Ⅱ | 1BBX + CCT | | TaBBX47 | TraesCS6B02G172300 | 6B:184884215-184886653 | 645 | 214 | 4.89 | 22154.35 | 2 | Ⅳ | 2BBX | | TaBBX48 | TraesCS6B02G179000 | 6B:198984566-198986312 | 1125 | 374 | 5.28 | 38846.14 | 3 | Ⅰ | 2BBX+ CCT | | TaBBX49 | TraesCS6B02G246500 | 6B:439021199-439022376 | 783 | 260 | 4.98 | 28026.56 | 2 | Ⅳ | 2BBX | | TaBBX50 | TraesCS6B02G248400 | 6B:445852206-445853977 | 966 | 321 | 5.34 | 33887.8 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX51 | TraesCS6B02G285200 | 6B:514117744-514119320 | 717 | 238 | 6.04 | 25141.06 | 3 | Ⅳ | 2BBX | | TaBBX52 | TraesCS6B02G315400 | 6B:563320471-563324616 | 1173 | 390 | 4.96 | 42531.41 | 4 | Ⅲ | 2BBX+ CCT | | TaBBX53 | TraesCS6B02G319500 | 6B:567397520-567399497 | 1113 | 370 | 5.58 | 41154.91 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX54 | TraesCS6B02G323400 | 6B:572391940-572393940 | 1287 | 428 | 6.4 | 46597.09 | 2 | Ⅱ | 1BBX + CCT | | TaBBX55 | TraesCS6D02G133100 | 6D:100871867-100874382 | 645 | 214 | 4.97 | 22054.19 | 2 | Ⅳ | 2BBX | | TaBBX56 | TraesCS6D02G140900 | 6D:110442898-110444721 | 1095 | 364 | 5.68 | 38019.41 | 3 | Ⅰ | 2BBX+ CCT | | TaBBX57 | TraesCS6D02G199200 | 6D:277099701-277101029 | 783 | 260 | 5.14 | 28221.83 | 2 | Ⅳ | 2BBX | | TaBBX58 | TraesCS6D02G202000 | 6D:284849813-284850866 | 954 | 317 | 5.17 | 33352.08 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX59 | TraesCS6D02G221700 | 6D:312763126-312764854 | 717 | 238 | 5.77 | 25258.08 | 3 | Ⅳ | 2BBX | | TaBBX60 | TraesCS6D02G267100 | 6D:377220309-377224969 | 1179 | 392 | 4.79 | 43027.95 | 4 | Ⅲ | 2BBX+ CCT | | TaBBX61 | TraesCS6D02G269500 | 6D:379572086-379574125 | 1110 | 369 | 5.5 | 40998.72 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX62 | TraesCS6D02G274100 | 6D:382588127-382590143 | 1305 | 434 | 6.12 | 47026.54 | 2 | Ⅱ | 1BBX + CCT | | TaBBX63 | TraesCS7A02G108400 | 7A:65969778-65975971 | 1080 | 359 | 5.1 | 38311.73 | 3 | Ⅳ | 2BBX | | TaBBX64 | TraesCS7A02G108700 | 7A:66173971-66174456 | 486 | 161 | 8.98 | 17172.82 | 1 | Ⅴ | 1BBX | | TaBBX65 | TraesCS7A02G132100 | 7A:85159979-85160728 | 750 | 249 | 7.65 | 25502.35 | 1 | Ⅰ | 1BBX + CCT | | TaBBX66 | TraesCS7A02G206200 | 7A:168812422-168813720 | 1299 | 432 | 5.32 | 47132.21 | 1 | Ⅱ | 1BBX + CCT | | TaBBX67 | TraesCS7A02G211300 | 7A:174203246-174205720 | 1158 | 385 | 6.06 | 42218.87 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX68 | TraesCS7A02G218600 | 7A:185642724-185648145 | 1191 | 396 | 4.92 | 43615.36 | 4 | Ⅲ | 2BBX+ CCT | | TaBBX69 | TraesCS7A02G263500 | 7A:261221617-261225670 | 1473 | 490 | 6.1 | 52005.04 | 4 | Ⅲ | 1BBX + CCT | | TaBBX70 | TraesCS7A02G383400 | 7A:558402604-558404184 | 852 | 283 | 5.04 | 29956.59 | 3 | Ⅳ | 2BBX | | TaBBX71 | TraesCS7A02G497200 | 7A:686936894-686938479 | 1119 | 372 | 5.96 | 39566.55 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX72 | TraesCS7B02G006400 | 7B:3684186-3689427 | 1017 | 338 | 4.83 | 36159.24 | 4 | Ⅳ | 2BBX | | TaBBX73 | TraesCS7B02G113400 | 7B:131376607-131378427 | 1299 | 432 | 5.3 | 47173.18 | 1 | Ⅱ | 1BBX + CCT | | TaBBX74 | TraesCS7B02G118300 | 7B:137793769-137796142 | 1152 | 383 | 6.24 | 42114.89 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX75 | TraesCS7B02G125500 | 7B:146898679-146904866 | 1014 | 337 | 4.32 | 36449.17 | 3 | Ⅲ | 2BBX | | TaBBX76 | TraesCS7B02G161500 | 7B:220866464-220870459 | 1467 | 488 | 6.44 | 51810.89 | 4 | Ⅲ | 1BBX + CCT | | TaBBX77 | TraesCS7B02G286300 | 7B:521577849-521579171 | 936 | 311 | 5.69 | 33195.49 | 2 | Ⅳ | 2BBX | | TaBBX78 | TraesCS7B02G400600 | 7B:667070044-667071768 | 1119 | 372 | 5.9 | 39407.46 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX79 | TraesCS7D02G103300 | 7D:63325536-63331403 | 1092 | 363 | 5.03 | 38772.21 | 3 | Ⅳ | 2BBX | | TaBBX80 | TraesCS7D02G131700 | 7D:83472836-83474058 | 753 | 250 | 6.09 | 25596.33 | 1 | Ⅰ | 1BBX + CCT | | TaBBX81 | TraesCS7D02G209000 | 7D:167228163-167229829 | 1299 | 432 | 5.26 | 47125.17 | 1 | Ⅱ | 1BBX + CCT | | TaBBX82 | TraesCS7D02G213000 | 7D:171311981-171314465 | 1119 | 372 | 6.31 | 41073.77 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX83 | TraesCS7D02G220300 | 7D:180685905-180691434 | 1191 | 396 | 4.92 | 43609.35 | 4 | Ⅲ | 2BBX+ CCT | | TaBBX84 | TraesCS7D02G264300 | 7D:244952312-244956390 | 1470 | 489 | 6.21 | 51903.89 | 4 | Ⅲ | 1BBX + CCT | | TaBBX85 | TraesCS7D02G379900 | 7D:492148581-492150240 | 858 | 285 | 5.02 | 30133.81 | 3 | Ⅳ | 2BBX | | TaBBX86 | TraesCS7D02G484400 | 7D:594729348-594730950 | 1119 | 372 | 5.86 | 39527.57 | 2 | Ⅰ | 2BBX+ CCT | | TaBBX87 | TraesCSU02G091500 | Un:81434193-81437118 | 1110 | 369 | 6.21 | 40011.43 | 4 | Ⅲ | 1BBX + CCT |
|
|
|