利用WGCNA鉴定花生主茎生长基因共表达模块
汪颖, 高芳, 刘兆新, 赵继浩, 赖华江, 潘小怡, 毕晨, 李向东, 杨东清

Identification of gene co-expression modules of peanut main stem growth by WGCNA
WANG Ying, GAO Fang, LIU Zhao-Xin, ZHAO Ji-Hao, LAI Hua-Jiang, PAN Xiao-Yi, BI Chen, LI Xiang-Dong, YANG Dong-Qing
表5 与模块内核心基因相关联基因及其功能注释
Table 5 Genes associated with hub gene in Grey60 and Brown modules and their function annotations
模块
Module
关联基因
Associated gene
权重
Weight
基因功能描述
Gene function annotations
Grey60 arahy.Tifrunner.gnm1.ann1.AJ1Q9U 0.1318 莽草酸香豆酯/奎酸酯3’-羟化酶(C3’H)
Coumaroyl shikimate/quinate 3’-hydroxylases (C3’H)
arahy.Tifrunner.gnm1.ann1.QGH881 0.1183 咖啡酰辅酶A-O-甲基转移酶(CCoAOMT)
Caffeoyl-CoA O-methyltransferase (CCoAOMT)
arahy.Tifrunner.gnm1.ann1.NC09XL 0.1175 4-香豆酸辅酶A连接酶(4CL)
4-coumarate-CoA ligase (4CL)
arahy.Tifrunner.gnm1.ann1.AXL13P 0.1169 莽草酸香豆酯/奎酸酯3’-羟化酶(C3'H)
Coumaroyl shikimate/quinate 3’-hydroxylases (C3'H)
arahy.Tifrunner.gnm1.ann1.ST1ALI 0.1109 4-香豆酸辅酶A连接酶(4CL)
4-coumarate-CoA ligase (4CL)
arahy.Tifrunner.gnm1.ann1.M5N13L 0.1086 快速碱化因子(RALF)
Rapid alkalinization factor (RALF)
模块
Module
关联基因
Associated gene
权重
Weight
基因功能描述
Gene function annotations
arahy.Tifrunner.gnm1.ann1.T3N7AF 0.1049 锌指蛋白
Zinc finger protein
arahy.Tifrunner.gnm1.ann1.D1AFGR 0.1046 类COBRA蛋白
COBRA-like protein
arahy.Tifrunner.gnm1.ann1.ND3FHR 0.1034 羟基肉桂酰辅酶A莽草酸/奎尼酸羟基肉桂酰转移(HCT)
Shikimate O-hydroxycinnamoyltransferase (HCT)
arahy.Tifrunner.gnm1.ann1.N9L63V 0.1027 鼠李半乳糖醛酸聚糖裂解酶(RGL)
Rhamnogalacturonan lyase (RGL)
Brown arahy.Tifrunner.gnm1.ann1.WKJE7A 0.1711 半乳聚糖β-1,4-半乳糖基转移酶(GALS3)
Galactan beta-1,4-galactosyltransferase (GALS3)
arahy.Tifrunner.gnm1.ann1.XNX4G2 0.1556 LRR受体样丝氨酸/苏氨酸蛋白激酶(FEI1)
LRR receptor-like serine/threonine-protein kinase (FEI1)
arahy.Tifrunner.gnm1.ann1.ZIW1BH 0.1548 果胶乙酰酯酶(PAE)
Pectin acetylesterase (PAE)
arahy.Tifrunner.gnm1.ann1.U9FET0 0.1529 类成蛋白1
Formin-like protein 1
arahy.Tifrunner.gnm1.ann1.V8PY6L 0.1521 富含亮氨酸重复序列的类伸展蛋白(LRXs)
Leucine-rich repeat extensin-like protein (LRXs)
arahy.Tifrunner.gnm1.ann1.Y1E6HX 0.1434 葡聚糖内切1,3-β-葡糖苷酶13
Glucan endo-1,3-beta-glucosidase 13
arahy.Tifrunner.gnm1.ann1.ZES6QF 0.1421 碱性亮氨酸拉链蛋白(bZIP34)
Basic leucine zipper 34
arahy.Tifrunner.gnm1.ann1.X0GQC6 0.1416 磷酸糖转运蛋白
Sugar phosphate/phosphate translocator
arahy.Tifrunner.gnm1.ann1.UC02TM 0.1403 RR型类受体丝氨酸/苏氨酸蛋白激酶
LRR receptor-like serine/threonine-protein kinase
arahy.Tifrunner.gnm1.ann1.Z92X92 0.1399 羟脯氨酸O-半乳糖基转移酶HPGT1
Hydroxyproline O-galactosyltransferase HPGT1