谷子穗发育期转录组与叶酸代谢谱联合分析

马贵芳, 满夏夏, 张益娟, 高豪, 孙朝霞, 李红英, 韩渊怀, 侯思宇

Integrated analysis between folate metabolites profiles and transcriptome of panicle in foxtail millet

MA Gui-Fang, MAN Xia-Xia, ZHANG Yi-Juan, GAO Hao, SUN Zhao-Xia, LI Hong-Ying, HAN Yuan-Huai, HOU Si-Yu

附表3 16个叶酸合成关键基因可变剪切事件统计

Table S3 Alternative splicing events of 16 key genes in folate synthesis

基因名称 Gene ID S1 S2 S3 染色体 Chr. 起始位点 Event_start 终止位点 Event_end 剪切类型 Event_type 染色体 Chr. 起始位点 Event_start 终止位点 Event_end 剪切类型 Event_type 染色体 Chr. 起始位点 Event_Start 终止位点 Event_end 剪切类型 Event_type ADCS Si005831m.g scaffold_4 36720083 36720416 TSS scaffold_4 36720083 36720714 TSS scaffold_4 36720083 36720666 TSS scaffold_4 36714947 36715745 TTS scaffold_4 36714906 36715745 TTS scaffold_4 36719830 36720403 TSS scaffold_4 36716869 36717210 IR scaffold_4 36718684 36718804 AE scaffold_4 36714937 36715745 TTS scaffold_4 36718586 36718684 IR scaffold_4 36718697 36718804 AE scaffold_4 36714904 36715745 TTS scaffold_4 36718586 36718664 IR scaffold_4 36718664 36718804 AE scaffold_4 36718586 36718697 IR scaffold_4 36718586 36718697 IR scaffold_4 36718586 36718684 IR scaffold_4 36718684 36718804 AE scaffold_4 36718697 36718804 AE scaffold_4 36718697 36718804 AE scaffold_4 36718684 36718804 AE scaffold_4 36718664 36718804 AE scaffold_4 36718664 36718804 AE scaffold_4 36718335 36718586 AE scaffold_4 36718335 36718606 AE ADCL1 Si017411m.g scaffold_1 10445656 10445931 TSS scaffold_1 10445656 10445931 TSS scaffold_1 10445656 10445931 TSS scaffold_1 10451775 10452094 TTS scaffold_1 10451775 10452094 TTS scaffold_1 10451775 10452094 TTS scaffold_1 10448493 10450227 ES scaffold_1 10448493 10448548 ES ADCL3 Si002147m.g scaffold_5 286063 286217 TSS scaffold_5 286063 286217 TSS scaffold_5 286063 286217 TSS scaffold_5 284297 285428 TTS scaffold_5 284297 285428 TTS scaffold_5 284297 285428 TTS scaffold_5 284297 285702 TTS scaffold_5 284297 285702 TTS scaffold_5 284297 285702 TTS GTPCHI Si021939m.g scaffold_3 1626381 1626634 TSS scaffold_3 1626381 1626634 TSS scaffold_3 1626381 1626634 TSS scaffold_3 1622984 1624611 TTS scaffold_3 1622984 1624611 TTS scaffold_3 1622984 1624611 TTS DHNA1 Si030989m.g scaffold_2 39956335 39956388 TSS scaffold_2 39956335 39956388 TSS scaffold_2 39956335 39956388 TSS scaffold_2 39957340 39957698 TTS scaffold_2 39957340 39957698 TTS scaffold_2 39957340 39957698 TTS DHNA2 Si014629m.g scaffold_6 35419038 35419453 TSS scaffold_6 35419038 35419453 TSS scaffold_6 35419038 35419453 TSS scaffold_6 35417984 35418412 TTS scaffold_6 35417984 35418412 TTS scaffold_6 35417984 35418412 TTS HPPK1/DHP S1 Si000970m.g scaffold_5 2400515 2400903 TSS scaffold_5 2400518 2400903 TSS scaffold_5 2400656 2400903 TSS scaffold_5 2401861 2403377 TTS scaffold_5 2401861 2403377 TTS scaffold_5 2401861 2403377 TTS scaffold_5 2401898 2403377 TTS scaffold_5 2401898 2403377 TTS HPPK2/DHP S2 Si026336m.g scaffold_8 927507 927755 TSS scaffold_8 927507 927751 TSS scaffold_8 927507 927748 TSS scaffold_8 927568 927755 TSS scaffold_8 927568 927743 TSS scaffold_8 927568 927748 TSS scaffold_8 925298 926981 TTS scaffold_8 925298 927006 TTS scaffold_8 925298 927006 TTS scaffold_8 925298 927006 TTS scaffold_8 928346 928456 TSS DHFS Si029390m.g scaffold_2 45202748 45203091 TSS scaffold_2 45202748 45203091 TSS scaffold_2 45202748 45203091 TSS scaffold_2 45197629 45198523 TTS scaffold_2 45197629 45198523 TTS scaffold_2 45197629 45198523 TTS scaffold_2 45200269 45200995 IR scaffold_2 45200269 45200995 IR scaffold_2 45200269 45200991 IR DHFR1 Si029497m.g scaffold_2 46935689 46935812 TSS scaffold_2 46935689 46935812 TSS scaffold_2 46935689 46935812 TSS scaffold_2 46941948 46942341 TTS scaffold_2 46941948 46942330 TTS scaffold_2 46941948 46942333 TTS scaffold_2 46941454 46941535 IR scaffold_2 46936888 46936960 ES scaffold_2 46936888 46936960 ES scaffold_2 46941454 46941535 IR scaffold_2 46939375 46939410 ES scaffold_2 46941454 46941535 IR DHFR2 Si026222m.g scaffold_8 23086218 23086319 TSS scaffold_8 23086218 23086319 TSS scaffold_8 23086218 23086319 TSS scaffold_8 23093650 23094000 TTS scaffold_8 23093650 23094000 TTS scaffold_8 23093650 23093993 TTS scaffold_8 23090412 23090460 ES scaffold_8 23087345 23087422 ES scaffold_8 23087345 23087422 ES scaffold_8 23087345 23087422 ES scaffold_8 23087345 23087400 ES scaffold_8 23090412 23090460 ES scaffold_8 23087422 23087911 IR scaffold_8 23087422 23087911 IR scaffold_8 23087422 23087911 IR scaffold_8 23087345 23088437 AE scaffold_8 23087400 23087911 IR scaffold_8 23087345 23088437 AE scaffold_8 23087911 23088437 AE scaffold_8 23087345 23087422 AE scaffold_8 23087911 23088437 AE scaffold_8 23087345 23088437 AE FPGS1 Si034828m.g scaffold_9 14396623 14396875 TSS scaffold_9 14396623 14396875 TSS scaffold_9 14396623 14396875 TSS scaffold_9 14396623 14397092 TSS scaffold_9 14401708 14401931 TTS scaffold_9 14396623 14397092 TSS scaffold_9 14401708 14401931 TTS scaffold_9 14404546 14404875 TTS scaffold_9 14401708 14401931 TTS scaffold_9 14404546 14405008 TTS scaffold_9 14398067 14398207 IR scaffold_9 14398067 14398207 IR scaffold_9 14398067 14398207 IR scaffold_9 14396965 14397092 AE scaffold_9 14396965 14397092 AE scaffold_9 14399581 14399711 IR scaffold_9 14396965 14397082 AE scaffold_9 14396965 14397082 AE scaffold_9 14396965 14397082 AE scaffold_9 14396965 14397092 AE FPGS2 Si035045m.g scaffold_9 58273141 58273265 TSS scaffold_9 58273141 58273469 TSS scaffold_9 58273141 58273265 TSS scaffold_9 58273141 58273469 TSS scaffold_9 58273141 58273265 TSS scaffold_9 58273141 58273261 TSS scaffold_9 58277131 58277474 TTS scaffold_9 58277131 58277474 TTS scaffold_9 58273141 58273469 TSS scaffold_9 58273333 58273469 AE scaffold_9 58273333 58273469 AE scaffold_9 58277253 58277474 TTS scaffold_9 58273345 58273469 AE scaffold_9 58273345 58273469 AE scaffold_9 58273333 58273469 AE scaffold_9 58273345 58273469 AE GGH Si022538m.g scaffold_3 13171089 13171472 TSS scaffold_3 13171089 13171472 TSS scaffold_3 13171089 13171472 TSS scaffold_3 13174465 13174749 TTS scaffold_3 13174465 13174749 TTS scaffold_3 13174465 13174749 TTS