Welcome to Acta Agronomica Sinica,

Acta Agron Sin ›› 2011, Vol. 37 ›› Issue (01): 1-17.doi: 10.3724/SP.J.1006.2011.00001

• REVIEW •     Next Articles

New Gene Discovery of Crops in China: Status, Challenging, and Perspective

QIU Li-Juan,GUO Yong,LI Yu,WANG Xiao-Bo,ZHOU Guo-An,LIU Zhang-Xiong,ZHOU Shi-Rong,LI Xin-Hai,MA You-Zhi,WANG Jian-Kang,WAN Jian-Min*   

  1. National Key Facility for Gene Resources and Genetic Improvement / Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
  • Received:2010-11-28 Revised:2010-12-12 Online:2011-01-12 Published:2010-12-15
  • Contact: 万建民, E-mail: wanjm@caas.net.cn E-mail:qiu_lijuan@263.net

Abstract: Gene discovery is the basis of molecular breeding in crops. The progress of gene discovery study of major crops such as rice, wheat, maize, soybean, cotton and oilseed rape in China during the past ten years was analyzed and reviewed in this paper. Gene discovery of crops in China has also made a series of breakthroughs: (1) A number of distinctive gene discovery materials were created, such as core germplasm based on crop genetic diversity, genetic population based on excellent genetic resources, mutants derived from artificial mutation, and so on. (2) Technology and methods of gene discovery were developed, especially the integration of various gene discovery technologies and improvement of biometric algorithm of gene/QTLs, and therefore the efficiency of gene discovery was improved. (3) Mapping markers and genes related to agronomic traits of crops has become a common method for genetic studies. A number of genes/QTLs associated with disease resistance, stress tolerance, quality, nutrient efficiency and yield have been mapped, of which more than 500 genes have been fine mapping. (4) Gene cloning and functional study in crops especially in rice become more and more important in the world. More than 300 genes have been cloned in the main crops, among which more than 70 genes have been functional validated in crops. With the development of genome sequence technology, gene discovery of crops become more and more efficient, large-scale and practical. However, the quality and quantity of crop gene discovery is still far from meeting the needs of molecular breeding of crops and the overall level of gene discovery has still fallen behind developed countries in the world. The development of gene discovery in different crops is uneven, the number of genes discovered is relatively limited and discovered genes with great value is still scare. Focused on the problems of gene discovery in China and the challenges of biotechnology companies in the worldwide, the strategy of crops gene discovery in China was proposed in this paper, including improvement of the efficiency of gene discovery, enhancement of gene cloning and the value of important genes, and the orientation of the development needs of biotechnology industry.

Key words: Crops, Gene, QTLs, Mapping, Cloning, Discovery, Function

[1]Li Y(黎裕), Wang J-K(王建康), Qiu L-J(邱丽娟), Ma Y-Z(马有志), Li X-H(李新海), Wan J-M(万建民). Crop molecular breeding in China: current status and perspectives. Acta Agron Sin (作物学报), 2010, 36(9): 1425–1430 (in Chinese with English abstract)
[2]Gao Y-J(高翼之). The origin of the term “gene”. Hereditas (遗传), 2000, 22(2): 107–108 (in Chinese with English abstract)
[3]Song W Y, Wang G L, Chen L L, Kim H S, Pi L Y, Holsten T, Gardner J, Wang B, Zhai W X, Zhu L H, Fauquet C, Ronald P. A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21. Science, 1995, 270: 1804–1806
[4]Yu J, Hu S N, Wang J, Wong K S , Li S, Liu B, Deng Y J, Dai L, Zhou Y, Zhang X Q, Cao M L, Liu J, Sun J D, Tang J B, Chen Y J, Huang X B, Lin W, Ye C, Tong W, Cong L J, Geng J N,Han Y J, Li L, Li W, Hu G Q, Huang X G, Li W J, Li J, Liu Z W, Li L, Liu J P, Qi Q H, Liu J S, Li L, Li T, Wang X G, Lu H, Wu T T, Zhu M, Ni P X, Han H, Dong W, Ren X Y, Feng X L, Cui P, Li X R, Wang H, Xu X, Zhai W X, Xu Z, Zhang J S, He S J, Zhang J G, Xu J C, Zhang K L, Zheng X W, Dong J H, Zeng W Y, Tao L, Ye J, Tan J, Ren X D, Chen X W, He J, Liu D F, Tian W, Tian C G, Xia H G, Bao Q Y, Li G, Gao H, Cao T, Wang J, Zhao W M, Li P, Chen W, Wang X D, Zhang Y, Hu J F, Wang J, Liu S, Yang J, Zhang G Y, Xiong Y Q, Li Z J, Mao L, Zhou C S, Zhu Z, Chen R S, Hao B L, Zheng W M, Chen S Y, Guo W, Li G J, Liu S Q, Tao M, Wang J, Zhu L H, Yuan L P, Yang H M. A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science, 2002, 296: 79–92
[5]The Arabidopsis Genome Initiative. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature, 2000, 408: 796–815
[1] Chen Guo-Huan, Zhang Rui, Li Yan-Di, Zhao Jia-Qi, Ren Yong-Tao, Zhang Tian-Ci, Guo Hua-Chun, Li Jun, Yang Fang. Effects of foliar application of exogenous selenium on anthocyanin biosynthesis in tubers of light purple-fleshed potatoes [J]. Acta Agronomica Sinica, 2026, 52(6): 1876-1890.
[2] Zhai Sheng-Nan, Cao Xin-You, Li Hao-Sheng, Li Ji-Hu, Li Fa-Ji, Liu Jin-Dong, Xia Xian-Chun, Lyu Ying-Ying, Ma Rui-Feng, Wang Ying, Geng Hong-Wei, Liu Jian-Jun. Analysis of the genetic effects of allelic variation at the Pod-A1, Pod-D1, and Pod-2D loci on peroxidase activity in wheat grains [J]. Acta Agronomica Sinica, 2026, 52(6): 1593-1603.
[3] Xi Qian-Hui, Xu Zi-Yuan, Liu Meng-Meng, Wang Hong-Yi, Lang Kai-Lin, Jing Zhen-Hai, Chen Feng, Zhao Lei. Genome-wide association study and candidate gene prediction of grain copper content in wheat [J]. Acta Agronomica Sinica, 2026, 52(6): 1604-1617.
[4] Mao Jia-Qi, Huang Peng-Yu, Zhao Jia-Jia, Zheng Xing-Wei, Wu Bang-Bang, Hao Yu-Qiong, Qu Fei, Liu Cheng, Ma Peng-Tao, Zheng Jun. Evaluation of powdery mildew resistance in wheat cultivars and molecular detection of resistance genes in Shanxi province, China [J]. Acta Agronomica Sinica, 2026, 52(6): 1669-1681.
[5] Zuo Tong-Hong, Zhang He-Cui, Zeng Jing, Zhu Li-Quan. Molecular cloning and expression analysis of BoPUB3L associated with self-incompatibility in Brasscia oleracea [J]. Acta Agronomica Sinica, 2026, 52(6): 1698-1710.
[6] Zheng Yu-Zhen, Qi Fei-Yan, Sun Zi-Qi, Liu Hua, Qin Li, Shi Lei, Wang Juan, Wang Meng-Meng, Han Suo-Yi, Xu Jing, Miao Li-Juan, Huang Bing-Yan, Dong Wen-Zhao, Zheng Zheng, Zhang Xin-You. QTL mapping of total very long-chain fatty acids and seven fatty acid components in peanut seeds [J]. Acta Agronomica Sinica, 2026, 52(6): 1646-1657.
[7] Hu Zhao, Qian Run, Xie Feng-Pu, Ying Su-Ping. Genome-wide identification and expression analysis of the SPX gene family in rice under phosphorus treatment [J]. Acta Agronomica Sinica, 2026, 52(6): 1902-1912.
[8] Zhang Xian-Feng, Guo Li-Jian, Li Kang-Chun, Kong Bin-Xue, Liu Yu-Fang, Che Zhuo, Yang De-Long. Identification of the ABHD6 gene family and development of functional markers for grain weight in wheat [J]. Acta Agronomica Sinica, 2026, 52(6): 1711-1727.
[9] Sun Shu-Feng, Xu Zhen-Nan, Huang Jia-Xin, Weng Jian-Feng, Li Xin-Hai. Genome-wide identification of the maize MAPK gene family and its response to Fusarium verticillioides infection [J]. Acta Agronomica Sinica, 2026, 52(5): 1291-1308.
[10] Yang Yang, Chang Shi-Hui, Tian Hong-Li, Yi Hong-Mei, Wang Lu, Ren Jie, Fan Ya-Ming, Liu Ya-Wei, Wang Feng-Ge, Zhao Jiu-Ran. Genetic diversity analysis of nationally approved maize varieties in different ecological regions [J]. Acta Agronomica Sinica, 2026, 52(5): 1352-1364.
[11] Guo Xing-Yu, Hu Dan, Lin Su-Qi, Wang Meng-Kai, Tan Wen-Feng, Huang Chuan-Qin. Biochar combined with chemical fertilizer increases maize yield and soil ecosystem multifunctionality in an intercropped maize-soybean [J]. Acta Agronomica Sinica, 2026, 52(5): 1536-1547.
[12] Yang Xin-Yu, Cui Wen-Tao, Dilinigeer Alimu, Wang Kai-Xiang, Wu Peng-Hao, Ren Jiao-Jiao. Genome-wide association and genomic selection analysis of the number of leaves above the ear in maize [J]. Acta Agronomica Sinica, 2026, 52(5): 1573-1590.
[13] Gu Chun-Miao, Wang Run-Feng, Huang Lu, Liu Hao, Lu Qing, Li Hai-Fen, Li Shao-Xiong, He Shuang-Cheng, Hong Yan-Bin, Chen Xiao-Ping, Tan Bin, Yu Qian-Xia. Genome-wide analysis of the WOX gene family and identification of candidate genes for adventitious shoot regeneration in peanut [J]. Acta Agronomica Sinica, 2026, 52(5): 1326-1340.
[14] Yan An, Jiang Kun-Wei, Wang Rong-Yuan, Tian Lin, Zhang Lu, Wang Yun, Xu Jian-Long. Identification and cloning of SVN7 controlling small vascular bundle number in the rice flag leaf [J]. Acta Agronomica Sinica, 2026, 52(5): 1364-1372.
[15] Song Song-Quan, Tang Cui-Fang, Liang Yu-Rong, Cheng Hong-Yan, Wang Wei-Qing. Research progress in biosynthesis and action mechanism of sRNAs and their regulation on seed development, dormancy and germination [J]. Acta Agronomica Sinica, 2026, 52(4): 959-981.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!