作物学报 ›› 2012, Vol. 38 ›› Issue (02): 360-368.doi: 10.3724/SP.J.1006.2012.00333
孙霞1,**,刘晋跃1,**,袁晓辉1,潘相文1,杜维广2,任海祥2,马永波3,Jun ABE4,邱丽娟5,*,刘宝辉1,*
SUN Xia1,**,LIU Jin-Yue1,**,YUAN Xiao-Hui1,PAN Xiang-Wen1,DU Wei-Guang2,REN Hai-Xiang2,MA Yong-Bo3,Jun ABE 4,QIU Li-Juan5,*,LIU Bao-Hui1,*
摘要: 本研究室根据一段抗逆的EST序列, 从栽培大豆东农42中克隆到4个开放阅读框均是外显子和内含子间隔构成的R2R3-MYB基因, 其中Gm02g01300、Gm03g38040和Gm10g01340与已公布的Willams 82基因组序列完全一致, Gm19g40650第375位的单核苷酸突变导致多肽链第125位的氨基酸发生置换(GAG375→GAC375, E125→D125)。以人工气候箱内模拟非生物胁迫(盐、碱、干旱和低温)处理栽培大豆东农42芽期, 选择适宜时间点, 采用荧光定量PCR技术, 检测R2R3-MYB基因的表达。结果表明, 4个基因的表达水平都存在明显波动, 呈诱导后短暂上调或下调两种表达模式, 但表达时间、强度和趋势存在明显差异; Gm02g01300受干旱诱导明显, Gm03g38040受多种胁迫条件诱导表达强烈, 推测这些基因在大豆非生物胁迫的调控中起到重要作用; 另外, 在子叶与胚间, 单个基因的表达也存在差异; 多种非生物胁迫条件下, 基因的表达不仅存在时空差异, 可能也具有调控模式的差异。
[1]Zhang C-Y(张椿雨), Long Y(龙艳), Feng J(冯吉), Meng J-L(孟金陵). Transcriptional regulation of plant genes and its significance in biology. Heredites (遗传), 2007, 29(7): 793-799 (in Chinese with English abstract) [2]Nakashima K, Yamaguchi-Shinozak K. Regulons involved in osmotic stress-responsive and cold stress-responsive gene expression in plants. Plant Physiol, 2006, 126: 62-71 [3]Liao Y, Zou H F, Wang H W, Zhang W K, Ma B, Zhang J S, Chen S Y. Soybean GmMYB76, GmMYB92 and GmMYB177 genes confer stress tolerance in transgenic Arabiopsis plants. Cell Res, 2008, 18: 1047-1060 [4]Chen Y H, Yang X Y, He K, Liu M H, Li J G, Gao Z F, Lin Z Q, Zhang Y F, Wang X X. The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. Plant Mol Biol, 2006, 60: 3553-3558 [5]Cedroni M L, Cronn R C, Adams K L, Wilkins T A, Wendel J F. Evolution and expression of MYB genes in diploid and poly cotton. Plant Mol Biol, 2003, 51: 313-325 [6]Li J, Michael T C, Tao J. Evolutionary dynamics of the DNA-binding domains in putative R2R3-MYB genes identified form rice subspecies indica and japonica genomes. Plant Physiol, 2004, 134: 575-585 [7]Rabinowicz P D, Braun E L, Wolfe A D, Bowen B, Grotewold E. Maize R2R3-Myb genes: sequence analysis reveals amplification in the higher plants. Genetics, 1999, 153(1): 427-444 [8]Liu L(刘蕾), Du H(杜海), Tang X-F(唐晓凤), Wu Y-M(吴燕民), Huang Y-B(黄玉碧), Tang Y-X(唐益雄). The roles of MYB transcription factors on plant defense responses and its molecular mechanism. Hereditas (遗传), 2008, 30(10): 1265-1271 (in Chinese with English abstract) [9]Chen B J, Wang Y, Hu Y L, Wu Q, Lin Z P. Cloning and characterization of drought-inducible MYB gene from Boea crassifolia. Plant Sci, 2005, 168: 493-500 [10]Vannini C, Locatelli F, Bracale M, Magnani E, Marsoni M, Osnato M, Mattana M, Baldoni E, Coraggio I. Overexpression of the rice Osmyb4 gene increases chilling and freezing tolerance of Arabidopsis thaliana plants. Plant J, 2004, 37: 115-127 [11]Dai X Y, Xu Y Y, Ma Q B, Xu W Y, Wang T, Xue Y B, Chong K. Overexpression of an R1R2R3-MYB gene, OsMYB3R-2, increases tolerance to freezing, drought and salt stress in transgenic Arabidopsis. Plant Physiol, 2007, 143: 1739-1751 [12]Ma Q B, Dai X Y, Xu Y Y, Guo J, Liu Y J, Chen N, Xiao J, Zhang D J, Xu Z H, Zhang X S, Chong K. Enhanced tolerance to chilling stress in OsMYB3R-2 transgenic rice is mediated by alteration in cell cycle and ectopic expression of stress genes. Plant Physiol, 2009, 150: 244-256 [13]Rubio V, Linhares F, Solano R, Martin A C, Iglesias J, Leyva A, Paz-Ares J. A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae. Gene Div, 2001, 15: 2122-2133 [14]Miyake K, Ito T, Sends M. Isolation of a subfamily of genes for R2R3-MYB transcription factors showing up-regulated expression under nitrogen nutrient-limited conditions. Plant Mol Biol, 2003, 53: 237-245 [15]Bender J, Fink G R. A Myb homologue, ATR1, activates tryptophan gene expression in Arabidopsis. Proc Natl Acad Sci USA, 1998, 95: 5655-5660 [16]Kranz H D, Denekamp M, Greco R, Jin H L, Leyva A, Meissner R C, Petroni K, Urzainqui A, Bevan M, Martin C, Smeekens S, Tonelli C, Paz-Ares J, Weisshaar B. Towards functional characterization of the members of the R2R3-MYB gene family from Arabidopsis thaliana. Plant J, 1998, 16: 263-276 [17]Stracke R, Werber M, Weisshaar B. The R2R3-MYB gene family in Arabidopsis thaliana. Curr Opin Plant Biol, 2001, 4: 447-456 [18]Hoeren F U, Dolferus R, Wu Y, Peacock W J, Dennis E S. Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygen. Genetics, 1998, 149: 479-490 [19]Yoo J H, Park C Y, Kim J C, Heo W D, Cheong M S, Park H C, Kim M C, Moon B C, Choi M S, Kang Y H. Direct interaction of a divergent CaM isoform and the transcription factor, MYB2, enhances salt tolerance in Arabidopsis. J Biol Chem, 2005, 280: 3697-3706 [20]Jin H, Cominelli E, Bailey P, Parr A, Mehrtens F, Jones J, Tonelli C, Weissharr B, Martin C. Transcriptional repression by AtMYB4 controls production of UV-protecting sunscreens in Arabidopsis. EMBO J, 2000, 19: 6150-6161 [21]Zhu J, Verslues P E, Zheng X, Lee B H, Zhan X, Manabe Y, Sokolchik I, Zhu Y, Dong C H, Zhu J K. HOS10 encodes an R2R3-type MYB transcription factor essential for cold acclimation in plants. Proc Natl Acad Sci USA, 2005, 102: 9966-9971 [22]Lea U S, Slimestad R, Smedvig P, Lillo C. Nitrogen deficiency enhances expression of specific MYB and bHLH transcription factors and accumulation of end products in the flavonoid pathway. Planta, 2007, 225: 1245-1253 [23]Agarwal P K, Agarwal P, Reddy M K, Sopory S K. Role of DREB transcription factors in abiotic and biotic stress tolerance in plants. Plant Cell Rep, 2006, 25: 1263-1274 [24]Cheong Y H, Chang H S, Gupta R, Wang X, Zhu T, Luan S. Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis. Plant Physiol, 2002, 129: 661-677 [25]Li J, Yang X, Wang Y, Li X, Gao Z, Pei M, Chen Z, Qu L J, Gu H. Two groups of MYB transcription factors share a motif which enhances trans-activation activity. Biochem Biophys Res Commun, 2006, 341: 1155-1163 [26]Raffaele S, Rivas S, Roby D. An essential role for salicylic acid in AtMYB30-mediated control of the hypersensitive cell death program in Arabidopsis. FEBS Lett, 2006, 580: 3498-3504 [27]Preston J, Wheeler J, Heazlewood J, Li S F, Parish R W. AtMYB32 is required for normal pollen development in Arabidopsis thaliana. Plant J, 2004, 40: 979-995 [28]Celenza J L, Quiel J A, Smolen G A, Merrikh H, Silvestro A R, Normanly J, Bender J. The Arabidopsis ATR1 Myb transcription factor controls indolic glucosinolate homeostasis. Plant Physiol, 2005, 137: 253-262 [29]Lippold F, Sanchez D H, Musialak M, Schlereth A, Scheible W R, Hincha D K, Udvardi M K. AtMyb41 regulates transcriptional and metabolic responses to osmotic stress in Arabidopsis. Plant Physiol, 2009, 149: 1761-1772 [30]Jung C, Seo J S, Han S W, Koo Y J, Kim C H, Song S I, Nahm B H, Choi Y D, Cheong J J. Overexpression of AtMYB44 enhances stomatal closure to confer abiotic stress tolerance in transgenic Arabidopsis. Plant Physiol, 2008, 146: 623-635 [31]Gigolashvili T, Berger B, Mock H P, Müller C, Weisshaar B, Flügge U I. The transcription factor HIG1/MYB51 regulates indolic glucosinolate biosynthesis in Arabidopsis thaliana. Plant J, 2007, 50: 886-901 [32]Park M Y, Kang J Y, Kim S Y. Overexpression of AtMYB52 confers ABA hypersensitivity and drought tolerance. Mol Cells, 2011, 31: 447-454 [33]Cominelli E, Galbiati M, Vavasseur A, Conti L, Sala T, Vuylsteke M, Leonhardt N, Dellaporta S L, Tonelli C. A guard-cell-specific MYB transcription factor regulates stomatal movements and plant drought tolerance. Curr Biol, 2005, 15: 1196-2000 [34]Liang Y K, Dubos C, Dodd I C, Holroyd G H, Hetherington A M, Campbell M M. AtMYB61, an R2R3-MYB transcription factor controlling stomatal aperture in Arabidopsis thaliana. Curr Biol, 2005, 15: 1201-1206 [35]Feng C P, Andreasson E, Maslak A, Mock H P, Mattsson O, Mundy J. Arabidopsis MYB68 in development and responses to environmental cues. Plant Sci, 2004, 167: 1099-1107 [36]Ma L, Sun N, Liu X, Jiao Y, Zhao H, Deng X W. Organ-specific expression of Arabidopsis genome during development. Plant Physiol, 2005, 138: 80-91 [37]Seo P J, Xiang F N, Qiao M, Park J Y, Lee Y N, Kim S G, Lee Y H, Park W J, Park C M. The MYB96 transcription factor mediates abscisic acid signaling during drought stress response in Arabidopsis. Plant Physiol, 2009, 151: 275-289 [38]Denekamp M, Smeekens S C. Integration of wounding and osmotic stress signals determines the expression of the AtMYB102 transcription factor gene. Plant Physiol, 2003, 132: 1415-1423 [39]Mengiste T, Chen X, Salmeron J, Dietrich R. The BOTRYTIS SUSCEPTIBLE1 gene encodes an R2R3MYB transcription factor protein that is required for biotic and abiotic stress responses in Arabidopsis. Plant Cell, 2003, 15: 2551-2565 [40]Hernandez G, Ramirez M, Valdes-Lopez O, Tesfaye M, Graham M A. Phosphorus stress in common bean: root transcript and metabolic responses. Plant Physiol, 2007, 144: 752-767 [41]Yang W-J(杨文杰), Wu Y-M(吴燕民), Tang Y-X(唐益雄). Expression and functional analysis of GmMYBJ6 from soybean. Heredites (遗传), 2009, 31(6): 645-653 (in Chinese with English abstract) [42]Liu B H, Watanabe S, Uchiyama T, Kong F J, Kanazawa A, Xia Z J, Nagamatsu A, Arai M, Yamada T, Kitamura K, Masuta C, Harada K, Abe J. The soybean stem growth habit gene Dt1 is an ortholog of Arabidopsis TERMINAL FLOWER1. Plant Physiol, 2010, 153: 1-13 [43]Kong F J, Liu B H, Xia Z J, Sato S S, Kim B, Watanabe A, Yamada T, Tabata S, Kanazawa A, Harada K, Abe J. Two coordinately regulated homologs of FLOWERING LOCUS T are involved in the control of photoperiodic flowering in soybean. Plant Physiol, 2010, 154: 1-12 [44]Khuri S, Bakker F T, Dunwell J M. Phylogeny, function, and evolution of the cupins, a structurally conserved, functionally diverse superfamily of proteins. Mol Biol Evol, 2001, 18: 593-605 |
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