欢迎访问作物学报,今天是

作物学报 ›› 2007, Vol. 33 ›› Issue (05): 799-804.

• 研究论文 • 上一篇    下一篇

遗传搭车与方差分析在水稻定向选择群体的抗旱性位点分析中的初步应用

郑天清1;徐建龙2;傅彬英2;高用明2;Satish Veruka3;Renee Lafitte3;翟虎渠2;万建民1,2;黎志康2,3,*   

  1. 1 南京农业大学作物遗传与种质创新国家重点实验室,江苏省植物基因工程研究中心,江苏南京210095;2 中国农业科学院作物科学研究所,北京100081;3 国际水稻研究所,DAPO Box 7777, Metro Manila, Philippines
  • 收稿日期:2006-04-07 修回日期:1900-01-01 出版日期:2007-05-12 网络出版日期:2007-05-12
  • 通讯作者: 黎志康

Application of Genetic Hitch-Hiking and ANOVA in Identification of Loci for Drought Tolerance in Populations of Rice from Directional Selection

ZHENG Tian-Qing1,XU Jian-Long2,FU Bing-Ying2,GAO Yong-Ming2,Satish VERUKA3,Renee LAFITTE3,ZHAI Hu-Qu2,WAN Jian-Min12,LI Zhi-Kang23*   

  1. 1 State Key Laboratory for Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University,Research Center of Plant Gene Engineering, Nanjing, 210095, Jiangsu; 2 Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China; 3 International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
  • Received:2006-04-07 Revised:1900-01-01 Published:2007-05-12 Published online:2007-05-12
  • Contact: LI Zhi-Kang

摘要:

水稻抗旱性属于复杂性状,近年的遗传研究日益关注胁迫下的产量相关位点。选用来自同一抗旱性较好的供体亲本(BG300),具有两种遗传背景(IR64和特青)和两种选择条件(低地和旱地)的4个水稻高代回交(BC2)抗旱性定向选择导入系群体。通过SSR分子标记,检测群体中供体等位基因的导入频率,分析了选择条件和遗传背景对供体等位基因导入频率的影响。在此基础上,利用基于遗传搭车原理的卡方检验对等位基因导入频率的偏离进行检测,同时结合表型-基因型方差分析(ANOVA)的方法,对上述群体进行了和抗旱性相关位点的QTL分析。共检测到显著位点24个,其中卡方检验发现20个,方差分析检测到8个。有4个被这两种方法都检测到,很可能是与胁迫下的产量直接相关的位点。同时也对非胁迫下的产量位点进行了检测,发现上述抗旱性位点与非胁迫下产量的关系不大。还就选择条件和遗传背景的效应等对目标性状QTL定位的影响进行了讨论。研究结果将为进一步的水稻抗旱性分子育种研究提供有用的信息和材料。

关键词: 水稻, 干旱, 产量, 遗传搭车效应, 方差分析

Abstract:

Drought tolerance (DT) in rice is a complicated trait. Recent genetic research has focused on yield under stress instead of physiological traits. Due to the limits from the huge labors required for both phenotyping and genotyping in traditional mapping work, progress in DT-QTL mapping is relatively slow. An attempt to identify DT-QTL based on genetic hitch-hiking theory in breeding population was described in this paper. With the combination of advanced backcrossing and artificial directional selection for yield under drought stresses of both rain-fed lowland (stress at the reproductive stage) and upland (stress through the whole life time), four sets of 43 introgression lines (ILs) with two relatively uniform genetic backgrounds (IR64 and Teqing) and the same donor of relatively good drought tolerances (BG300) were developed. Introgression of donor alleles in the DT ILs were characterized with 214 well distributed SSR markers representing 98 bins throughout the whole genome. A total of twenty-four significant loci (DT-QTL) were found, of which 20 belonged to allelic-frequency-deviation loci detected by chi-square test at the significant level of P<0.005 and 8 were detected by analysis of variances (ANOVA) with data from progeny test in replicated experiments at the significant level of P<0.01, respectively. Of the 20 loci detected by chi-square test, four (about 20%) were verified by ANOVA and supposed to be directly associated with yield under drought stress. The analysis for yield under irrigation for the same populations was also carried out; few overlap with the DT-QTL was found. The above DT-QTL as well as the DT ILs supposed to offer useful information and materials for the further rice DT molecular breeding. The genetic overlaps between the different selections and the effects of genetic backgrounds were discussed.

Key words: Rice (Oryza sativa L.), Drought, Yield, Genetic hitch-hiking, ANOVA

[1] 胡川, 赵凯男, 黄修利, 吴金芝, 任开明, 王贺正, 付国占, 黄明, 李友军. 一次灌溉下耕作方式和氮肥用量对旱地小麦产量和品质的影响[J]. 作物学报, 2026, 52(6): 1830-1846.
[2] 马胜乾, 王志平, 陈浩天, 窦淑贤, 张燕, 邓艾兴, 张卫建, 原向阳, 宋振伟. 秸秆还田下耕作方式与氮肥施用量对东北玉米产量及土壤团聚体的影响[J]. 作物学报, 2026, 52(6): 1802-1816.
[3] 胡赵, 钱润, 谢丰璞, 应素平. 水稻SPX基因家族鉴定及响应磷处理的表达分析[J]. 作物学报, 2026, 52(6): 1902-1912.
[4] 邹仪妹, 徐敏, 汪海洋, 姚辉, 王加峰, 刘浩, 任代胜. 两系不育系水稻幼苗根系响应盐胁迫的转录因子调控网络鉴定[J]. 作物学报, 2026, 52(6): 1728-1742.
[5] 张思思, 赵向辉, 周洋, 姚云凤, 朱荣昱, 董元杰, 胡国庆, 徐通, 刘兆新. 冬闲期翻耕和绿肥还田对连作花生田土壤理化性质和产量的影响[J]. 作物学报, 2026, 52(5): 1472-1486.
[6] 张宁宁, 滕雨菲, 任娜娜, 魏兴卓, 闫书豪, 樊可心, 王永宏, 陈文康, 张兴华, 朱万超, 徐淑兔, 薛吉全. 201份玉米自交系抗旱表型评价及可塑性分析[J]. 作物学报, 2026, 52(5): 1309-1325.
[7] 张鸿蓉, 王菲儿, 李盼, 仇海龙, 朱静, 赵连豪, 南运有, 何蔚, 樊志龙, 胡发龙, 柴强, 殷文. 减量20%灌水与25%有机肥替代化肥提高青贮玉米产量的光合特性[J]. 作物学报, 2026, 52(5): 1487-1500.
[8] 张振, 冯连杰, 石玉, 于振文, 张永丽. 节水补灌下不同穗型小麦产量形成差异研究[J]. 作物学报, 2026, 52(5): 1522-1535.
[9] 闫安, 蒋昆炜, 王蓉圆, 田林, 张璐, 王韵, 徐建龙. 水稻剑叶小维管束数基因SVN7的鉴定与克隆[J]. 作物学报, 2026, 52(5): 1364-1372.
[10] 刘昕萌, 任昊, 张继波, 张吉旺, 赵斌, 任佰朝, 刘鹏, 王洪章. 茉莉酸甲酯(MeJA)缓解高温影响玉米雌穗分化的生理机制[J]. 作物学报, 2026, 52(5): 1561-1572.
[11] 王壮壮, 武紫君, 张永新, 张芯源, 袁丽雪, 陈如雪, 刘世举, 段剑钊, 冯伟, 王同朝, 王永华. 豫东南黏壤潮土区水氮优化协同提高冬小麦产量和氮素利用效率[J]. 作物学报, 2026, 52(5): 1501-1521.
[12] 王宇诚, 张露, 刘阿康, 黄见良, 彭少兵, 袁珅. 基于产量差的作物大面积单产提升策略与展望[J]. 作物学报, 2026, 52(5): 1279-1290.
[13] 赵佳雪, 周龙昊, 郭岂源, 尚伦霄, 王涵, 刘志涛, 陈曦, 张晓佩, 宋宪亮, 毛丽丽. 长期秸秆还田与深松通过改善土壤环境与棉花光合特性提高滨海盐碱地棉花产量[J]. 作物学报, 2026, 52(5): 1548-1560.
[14] 郭星宇, 胡丹, 林苏期, 王梦凯, 谭文峰, 黄传琴. 生物炭配施化肥提高玉米‖大豆下玉米产量和土壤生态系统多功能性[J]. 作物学报, 2026, 52(5): 1536-1547.
[15] 陈伟, 卫万娟, 赵其兵, 常东伟, 余凌波, 翟鹏飞, 冯志明, 陈宗祥, 任仰涛, 杨鹏, 刘海浪, 李珍富, 杨永乐, 金彦刚, 左示敏. 利用CRISPR/Cas9编辑Hd6基因创制优质早熟水稻新种质[J]. 作物学报, 2026, 52(4): 1046-1056.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!