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Acta Agronomica Sinica ›› 2018, Vol. 44 ›› Issue (11): 1600-1611.doi: 10.3724/SP.J.1006.2018.01600
• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles Next Articles
Yu TIAN,Lei YANG,Ying-Hui LI(
),Li-Juan QIU()
| [1] | Li Y H, Qi X T, Chang R Z, Qiu L J. Evaluation and utilization of soybean germplasm for resistance to cyst nematode in China. In: Sudaric A eds. Soybean-Molecular Aspects of Breeding. InTech, Croatia, 2011. pp 373-396 |
| [2] | Niblack T L, Lambert K N, Tylka G L . A model plant pathogen from the kingdom animalia: Heterodera glycines, the soybean cyst nematode. Annu Rev Phytopathol, 2006,44:283-303 |
| [3] |
Kim K S, Vuong T D, Qiu D, Robbins R T, Grover S J, Li Z . Advancements in breeding, genetics, and genomics for resistance to three nematode species in soybean. Theor Appl Genet, 2016,129:2295-2311
doi: 10.1007/s00122-016-2816-x |
| [4] |
Concibido V C, Diers B W, Arelli P R . A decade of QTL mapping for cyst nematode resistance in soybean. Crop Sci, 2004,44:1121-1131
doi: 10.2135/cropsci2004.1121 |
| [5] |
Delheimer J C, Niblack T, Schmidt M, Shannon G, Diers B W . Comparison of the effects in field tests of soybean cyst nematode resistance genes from different resistance sources. Crop Sci, 2010,50:2231-2239
doi: 10.2135/cropsci2010.01.0013 |
| [6] | Niblack T L, Colgrove A L, Colgrove K, Bond J P . Shift in virulence of soybean cyst nematode is associated with use of resistance from PI 88788. Plant Health Prog, 2008, doi: 10.1094/ PHP-2008-0118-01-RS |
| [7] | Mulrooney R P, Gregory N F, Heinz R D . Soybean cyst nematode populations in delaware are shifting in response to widespread planting of soybean cultivars with resistance from PI 88788. J Nematol, 2010,42:259-260 |
| [8] | Chen S, Potter B, Orf J . Virulence of the soybean cyst nematode has increased over years in Minnesota. J Nematol, 2010,42:238-238 |
| [9] |
Saintenac C, Zhang W, Salcedo A, Rouse M N, Trick H N, Akhunov E . Identification of wheat gene sr35 that confers resistance to ug99 stem rust race group. Science, 2013,341:783-786
doi: 10.1126/science.1239022 pmid: 4748951 |
| [10] | Vuong T D, Sleper D A, Shannon J G, Nguyen H T . Novel quantitative trait loci for broad-based resistance to soybean cyst nematode (Heterodera glycines Ichinohe) in soybean PI 567516C.Theor Appl Genet, 2010,121:1253-1266 |
| [11] |
Cook D E, Lee T G, Guo X, Melito S, Wang K, Bayless A M, Wang J, Hughes T J, Willis D K, Clemente T E . Copy number variation of multiple genes at Rhg1 mediates nematode resistance in soybean. Science, 2012,338:1206-1209
doi: 10.1126/science.1228746 pmid: 23065905 |
| [12] | Cook D E, Bayless A M, Wang K, Guo X, Song Q, Jiang J, Bent A F . Distinct copy number, coding sequence, and locus methylation patterns underlie Rhg1 -mediated soybean resistance to soybean cyst nematode. Plant Physiol, 2014,165:630-647 |
| [13] |
Liu S M, Kandoth P K, Lakhssassi N, Kang J W, Colantonio V, Heinz R, Yeckel G, Zhou Z, Bekal S, Dapprich J . The soybeanGmSNAP18 gene underlies two types of resistance to soybean cyst nematode. Nat Commun, 2017, doi: 10.1038/ncomms14822
doi: 10.1038/ncomms14822 pmid: 5378975 |
| [14] | Liu S M, Kandoth P K, Warren S D, Yeckel G, Heinz R, Alden J, Yang C L, Jamai A, El-Mellouki T, Juvale P S . A soybean cyst nematode resistance gene points to a new mechanism of plant resistance to pathogens. Nature, 2012,492:256-260 |
| [15] | Li Y H, Shi X H, Li H H, Reif J C, Wang J J, Liu Z S, He S, Yu B S, Qiu L J . Dissecting the genetic basis of resistance to soybean cyst nematode combining linkage and association mapping. Plant Genome, 2016, doi: 10.3835/plantgenome2015.3804.0020 |
| [16] | Lakhssassi N, Liu S M, Bekal S, Zhou Z, Colantonio V, Lambert K, Barakat A, Meksem K . Characterization of the Soluble NSF Attachment Protein gene family identifies two members involved in additive resistance to a plant pathogen. Sci Rep, 2017, doi: 10.1038/srep45226 |
| [17] | 邱丽娟, 常汝镇, 王文辉 , Cregan P, Wang D, Chen Y, 马凤鸣. 大豆抗胞囊线虫病种质rhg_1和Rhg_4位点的单核苷酸多态性(SNPs). 植物遗传资源学报, 2003,4(2):89-93 |
| Qiu L J, Chang R Z, Wang W H, Cregan P, Wang D, Chen Y , Ma F M . Single Nucleotide Polymorphism ( SNPs) at both loci of rhg1 and Rhg4 in soybean resistant germplasm. J Plant Genet Resour, 2003,4(2):89-93 (in Chinese with English abstract) | |
| [18] |
Shi Z, Liu S M, Noe J, Arelli P, Meksem K, Li Z L . SNP identification and marker assay development for high-throughput selection of soybean cyst nematode resistance. BMC Genomics, 2015,16:314
doi: 10.1186/s12864-015-1531-3 |
| [19] |
Kadam S, Vuong T D, Qiu D, Meinhardt C G, Song L, Deshmukh R, Patil G, Wan J, Valliyodan B, Scaboo A M . Genomic-assisted phylogenetic analysis and marker development for next generation soybean cyst nematode resistance breeding. Plant Sci, 2016,242:342-350
doi: 10.1016/j.plantsci.2015.08.015 |
| [20] | 南海洋, 李英慧, 常汝镇, 邱丽娟 . 基于大豆胞囊线虫病抗性候选基因rhg1的InDel标记开发与鉴定. 作物学报, 2009,35:1236-1243 |
| Nan H Y, Li Y H, Chang R Z, Qiu L J . Development and identification of InDel markers based on rhg1 gene for resistance to soybean cyst nematode( Heterodera glycines Ichinohe). Acta Agron Sin, 2009,35:1236-1243 (in Chinese with English abstract) | |
| [21] | Cregan P B, Mudge J, Fickus E W, Danesh D, Denny R, Young N D . Two simple sequence repeat markers to select for soybean cyst nematode resistance coditioned by therhg1 locus. Theor Appl Genet, 1999,99:811-818 |
| [22] | 史学晖, 李英慧, 于佰双, 郭勇, 王家军, 邱丽娟 . 大豆胞囊线虫主效抗病基因Rhg4(GmSHMT)的CAPS/dCAPS标记开发和利用. 作物学报, 2015,41:1463-1471 |
| Shi X H, Li Y H, Yu B S, Guo Y, Wang J J, Qiu L J . Development and utilization of CAPS/dCAPS markers based on the SNPs lying in soybean cyst nematode resistant genes Rhg4. Acta Agron Sin, 2015,41:1463-1471 (in Chinese with English abstract) | |
| [23] | Steele K A , Quinton-Tulloch M J, Amgai R B, Dhakal R, Khatiwada S P, Vyas D. Accelerating public sector rice breeding with high-density KASP markers derived from whole genome sequencing of indica rice. Mol Breed, 2018,38:38 |
| [24] | Tan C T, Yu H J, Yang Y, Xu X Y, Chen M S, Rudd J C, Xue Q W, Ibrahim AMH, Garza L, Wang S C . Development and validation of KASP markers for the greenbug resistance gene Gb7 and the Hessian fly resistance gene H32 in wheat. Theor Appl Genet, 2017,130:1867-1884 |
| [25] |
Patil G, Chaudhary J, Vuong T D, Jenkins B, Qiu D, Kadam S . Development of SNP genotyping assays for seed composition traits in soybean. Int J Plant Genomics, 2017, doi: org/10.1155/ 2017/6572969
doi: 10.1155/2017/6572969 pmid: 28630621 |
| [26] | Patil G, Do T, Vuong T D, Valliyodan B, Lee J D, Chaudhary J, Shannon J G, Nguyen H T . Genomic-assisted haplotype analysis and the development of high-throughput SNP markers for salinity tolerance in soybean. Sci Rep, 2016, doi: 10.1038/srep19199 |
| [27] |
Rasheed A, Wen W, Gao F M, Zhai S N, Jin H, Liu J D, Guo Q, Zhang Y J, Dreisigacker S, Xia X C, He Z H . Development and validation of KASP assays for genes underpinning key economic traits in bread wheat. Theor Appl Genet, 2016,129:1843-1860
doi: 10.1007/s00122-016-2743-x |
| [28] |
Pham A T, Mcnally K, Abdel H H, Roger B H, Li Z . Fine mapping and identification of candidate genes controlling the resistance to southern root-knot nematode in PI 96354. Theor Appl Genet, 2013,126:1825-1838
doi: 10.1007/s00122-013-2095-8 |
| [29] |
Ma Y S, Wang W H, Wang L X, Ma F M, Wang P W, Chang R Z, Qiu L J . Genetic diversity of soybean and the establishment of a core collection focused on resistance to soybean cyst nematode. J Integr Plant Biol, 2006,48:722-731
doi: 10.1111/jipb.2006.48.issue-6 |
| [30] | Golden A M, Et A L . Terminology and identity of infraspecific forms of the soybean cyst nematode (Heterodera glyecines ). Plant Dis Rep, 1970,54:544-546 |
| [31] | Schmitt D P, Shannon G . Differentiating soybean responses to Heterodera glycines races. Crop Sci, 1992,32:275-277 |
| [32] | Nair S K, Babu R, Magorokosho C, Mahuku G, Semagn K, Beyene Y, Das B, Makumbi D, Kumar P L, Olsen M . Fine mapping of Msv1, a major QTL for resistance to Maize Streak Virus leads to development of production markers for breeding pipelines. Theor Appl Genet, 2015,128:1839-1854 |
| [33] | Liu Z Y, Zhu C S, Jiang Y, Tian Y L, Yu J, An H Z, Tang W J, Sun J, Tang J P, Chen G M, Zhai H Q, Wang C M, Wan J M . Association mapping and genetic dissection of nitrogen use efficiency-related traits in rice (Oryza sativa L.). Funct Integr Genomics, 2016,16:323-333 |
| [34] | Concibido V C, Denny R L, Boutin S R, Hautea R, Orf J H, Young N D . DNA marker analysis of loci underlying resistance to soybean cyst nematode (Heterodera glycines Ichinohe).Crop Sci, 1994,34:240-246 |
| [35] |
袁翠平, 卢为国, 刘章雄, 李英慧, 李卫东, 关荣霞, 常汝镇, 邱丽娟 . 大豆抗胞囊线虫4号生理小种新品系SSR标记分析. 作物学报, 2008,34:1858-1864
doi: 10.3724/SP.J.1006.2008.01858 |
|
Yuan C P, Lu W G, Liu Z X, Li Y H, Li W D, Guan R X, Chang R Z, Qiu L J . SSR analysis of new developed soybean lines resistant to soybean cyst nematode ( Heterodera glycines Ichinohe) race 4. Acta Agron Sin, 2008,34:1858-1864 (in Chinese with English abstract)
doi: 10.3724/SP.J.1006.2008.01858 |
|
| [36] |
王文辉, 邱丽娟, 常汝镇, 马凤鸣, 谢华, 林凡云 . 中国大豆种质抗SCN基因rhg1位点SSR标记等位变异特点分析. 大豆科学, 2003,22:246-250
doi: 10.3969/j.issn.1000-9841.2003.04.002 |
|
Wang W H, Qiu L J, Chang R Z, Ma F M, Xie H, Lin F Y . Characteristics of alleles at Satt309 locus associated with rhg1 gene resistant to SCN of Chinese soybean germplasm. Soybean Sci, 2003,22:246-250 (in Chinese with English abstract)
doi: 10.3969/j.issn.1000-9841.2003.04.002 |
|
| [37] |
Chen Y, Wang D, Arelli P, Ebrahimi M, Nelson R L . Molecular marker diversity of SCN-resistant sources in soybean. Genome, 2006,49:938-949
doi: 10.1139/g06-057 pmid: 17036069 |
| [38] |
Kim M, Hyten D L, Niblack T L, Diers B W . Stacking resistance alleles from wild and domestic soybean sources improves soybean cyst nematode resistance. Crop Sci, 2011,51:934-943
doi: 10.2135/cropsci2010.08.0459 |
| [39] |
Matsye P D, Lawrence G W, Youssef R M, Kim K H, Lawrence K S, Matthews B F, Klink V P . The expression of a naturally occurring, truncated allele of an α-SNAP gene suppresses plant parasitic nematode infection. Plant Mol Biol, 2012,80:131-155
doi: 10.1007/s11103-012-9932-z |
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