Acta Agron Sin ›› 2013, Vol. 39 ›› Issue (09): 1548-1561.doi: 10.3724/SP.J.1006.2013.01548
• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles Next Articles
AI Ni-Jiang1,2,LIU Ren-Zhong1,3,ZHAO Tu-Qiang2,QIN Jiang-Hong2,ZHANG Tian-Zhen1,*
[1]Zhou Y-H(周有耀). Study on the relationship between earliness and fiber quality in upland cotton. China Cotton (中国棉花), 1990, 17(5): 13–15 (in Chinese)[2]Bie S(别墅), Zhou Y-Y(周有耀). Study on the genetic relationship between earliness and fiber quality in upland cotton. Acta Gossypii Sin (棉花学报), 1990, 2(2): 31–37 (in Chinese)[3]Basbag S, Ekinci R, Gencer O. Combining ability and heterosis for earliness characters in line × tester population of Gossypium hirsutum L. Hereditas, 2007, 144: 185–190[4]Zhu Q-H(朱乾浩), Yu B-X(俞碧霞), Xu F-H(许复华). Genetic analysis of yield traits in glandless cotton hybrids. Acta Gossypii Sin (棉花学报), 1994, 6(4): 215–220 (in Chinese with English abstract)[5]Cheng H-L(承泓良), Yu S-X(喻树讯). Studies on the earliness Inheretance of upland cottons (Gossypium hirsutum L.). Acta Gossypii Sin (棉花学报), 1994, 6(1): 9–15 (in Chinese with English abstract)[6]Li W-H(李卫华), Hu X-Y(胡新燕), Shen W-W(申温文), Song Y-P(宋玉萍), Xu J-A(徐加安), Li Q(李强). Genetic analysis of important economic traits in upland cotton (G. hirsutum L.). Acta Gossypii Sin (棉花学报), 2000, 12(2): 81–84 (in Chinese with English abstract)[7]Godoy A S, Palomo G A. Genetic analysis of earliness in upland cotton (Gosspium hirsutum L.): I. Morphological and phonological variables. Euphytica, 1999, 105: 155–160[8]Song M-Z(宋美珍), Yu S-X(喻树迅), Fan S-L(范术丽), Yuan R-H(原日红), Huang Z-M(黄祯茂). Genetic analysis of main agronomic traits in short season upland cotton (Gossypium hirsutum L.). Cotton Sci (棉花学报), 2005, 17(2): 94–98 (in Chiese with English abstract)[9]Fan S-L(范术丽), Yu S-X(喻树迅), Yuan R-H(原日红), Song M-Z(宋美珍). Genetic effects and environmental interactions of early maturity in short-season cotton. Acta Bot Boreal-Occident Sin (西北植物学报), 2006, 26 (11): 2270–2275 (in Chinese with English abstract)[10]Ai N-J(艾尼江), Zhu X-X(朱新霞), Guan R-Z(管荣展), Wan Y(万英), Zhang T-Z(张天真). Genetic analysis of major locus group of pre-frost lint yield in upland cotton. Acta Agron Sin (作物学报), 2010, 36(5): 736–743 (in Chinese with English abstract)[11]Ai N-J(艾尼江), Zhu X-X(朱新霞), Guan R-Z(管荣展), Zhao J-J(赵建军), Zhang T-Z(张天真). Genetic analysis of major locus group constitutions of growth stages in upland cotton. Sci Agric Sin (中国农业科学), 2010, 43(20): 4140–4148 (in Chinese with English abstract) [12]White T G. Diallel analysis of some quantitatively inherited characters in Gossypium hirsutum L. Crop Sci, 1966, 4: 253–255[13]Yu S-X(喻树迅), Huang Z-M(黄祯茂). Genetic analysis on components of early maturity in short-season cotton varieties. Sci Agric Sin (中国农业科学), 1990, 23(6): 48–54 (in Chinese with English abstract)[14]Ji D-F(季道藩), Wang R-H(汪若海), Pan J-J(潘家驹). Cotton Knowledge Encyclopedia (棉花知识百科). Beijing: China Agriculture Press, 2001 (in Chinese)[15]Anjum R, Soomro A R, Chang M A. Measurement of earliness in upland cotton. Pakistan J Biol Sci, 2001, 4: 462–463[16]Shakeel A, Azhar F M, Khan I A. Assessment of earliness in Gossypium hirsutum L. Pakistan J Agric Sci, 2008, 45: 80–87[17]Reinisch A J, Dong J M, Brubaker C L, Stelly D M, Wendel J F, Paterson A H. A detailed RFLP map of cotton, Gossypium hirsutum × Gossypium barbadense, chromosome organization and evolution in a disomic polyploid genome. Genetics, 1994, 138: 829–847[18]Brubaker C L, Paterson A H, Wendel J F. Comparative genetic mapping of allotetraploid cotton and its diploid progenitors. Genome, 1999, 42: 184–203[19]Rong J K, Abbey C, Bowers J E, Brubaker C L, Chang C, Chee P W, Delmonte T A, Ding X L, Garza J J, Marler B S, Park C, Pierce G J, Rainey K M, Rastogi V K, Schulze S R, Trolinder N L, Wendel J F, Wilkins T A, Williams-Coplin T D, Wing R A, Wright R J, Zhao X P, Zhu L H, Paterson A H. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics, 2004, 166: 389–417[20]Nguyen T B, Giband M, Brottier P, Risterucci A M, Lacape J M. Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers. Theor Appl Genet, 2004, 109: 167–175[21]Guo W Z, Cai C P, Wang C B, Zhao L, Wang L, Zhang T Z. A preliminary analysis of genome structure and composition in Gossypium hirsutum. BMC Genom, 2008, 9: 314[22]Ulloa M, Meredith W R. Genetic linkage map and QTL analysis of agronomic and fiber quality traits in an intraspecific population. Cotton Sci, 2000, 4: 161–170[23]Ulloa M, Saha S, Jenkins J N, Meredith Jr W R, McCarty Jr J C, Stelly D M. Chromosomal assignment of RFLP linkage groups harboring important QTLs on an intraspecific cotton (Gossypium hirsutum L.) joinmap. J Hered, 2005, 96: 132–144[24]Shen X L, Guo W Z, Zhu X F, Yuan Y L, Yu J Z, Kohel R J, Zhang T Z. Molecular mapping of QTLs for qualities in three diverse lines in Upland cotton using SSR markers. Mol Breed, 2005, 15: 169–181[25]Zhang Z S, Xiao Y H, Luo M, Li X B, Luo X Y, Hou L, Li D M, Pei Y. Construction of a genetic linkage map and QTL analysis of fiber-related traits in upland cotton (Gossypium hirsutum L.). Euphytica, 2005, 144: 91–99[26]Lin Z X, Zhang Y X, Zhang X L, Guo X P. A high-density integrative linkage map for Gossypium hirsutum. Euphytica, 2008, 166: 35–45[27]Guo W Z, Cai C P, Wang C B, Han Z G, Song X L, Wang K, Niu X W, Wang C, Liu K Y, Zhang T Z. A microsatellite-based gene-rich linkage map revels genome structure, function and evolution in Cossypium. Genetics, 2007, 176: 527–541[28]Yu J, Kohel R J, Smit C W. The construction of a tetraploid cotton genome wide comprehensive reference map. Genomics, 2010, 95: 230–240[29]Jiang C J, Pan X B, Gu M H. The use of mixture models to detect effects of major genes on quantitative characters in plant breeding experiment. Genetics, 1994, 136: 383–394[30]Wang B H, Guo W Z, Zhu X F, Wu Y T, Huang N T, Zhang T Z. QTL mapping of fiber quality in an elite hybrid derived-RILs in upland cotton. Euphytica, 2006, 152: 367–378[31]Yang C(杨昶), Guo W-Z(郭旺珍), Zhang T-Z(张天真). QTL mapping for resistance to Verticillium wilt, fiber quality and yield traits in upland cotton (Gossypium hirsutum L.). Mol Plant Breed (分子植物育种), 2007, 5(6): 797–805 (in Chinese with English abstract)[32]Qin H D, Guo W Z, Zhang Y M, Zhang T Z. QTL mapping of yield and fiber traits based on a four- way cross population in Gossypium hirsutum L. Theor Appl Genet, 2008, 117: 883–894[33]Wang P, Su L, Qin L, Hu B, Guo W, Zhang T. Identification and molecular mapping of a Fusarium wilt resistant gene in upland cotton. Theor Appl Genet, 2009, 119: 93–103[34]Zhang X-L(张先亮), Gao J-S(高俊山), Song G-L(宋国立), Liu F(刘方), Li S-H(黎绍惠), Liu K-F(刘克锋), Chu Z-Y(楚宗艳), Shao Y-Y(邵玉英), Wang K-B(王坤波). Additive and epistatic effects QTL analysis on upland cotton CRI-G6. Mol Plant Breed (分子植物育种), 2009, 7(2): 312–320 (in Chinese with English abstract)[35]Fan S-L(范术丽), Yu S-X(喻树迅), Song M-Z(宋美珍), Yuan R-H(原日红). Construction of molecular linkage map and QTL mapping for earliness in short-season. cotton. Cotton Sci (棉花学报), 2006, 18(3): 135–139 (in Chinese with English abstract)[36]Guo Y F, McCarty J C, Jenkins J N, An C F, Saha S. Genetic detection of node of first fruiting branch in crosses of a cultivar with two exotic accessions of upland cotton. Euphytica, 2009, 166: 317–329[37]Nusrat O(努斯来提.吾斯曼), Yu S-X(喻树迅), Fan S-L(范术丽), Pang C-Y(庞朝友). Correlation of agronomic characters and QTL mapping in mechanical harvest cotton (Gossypium hirsutum L.). Xinjiang Agric Sci (新疆农业科学), 2012, 49(5): 791–795 (in Chinese with English abstract)[38]Li C Q, Wang C B, Dong N, Wang X Y, Zhao H H, Richard C, Xia Z, Wang R, Wang Q L. QTL detection for node of ?rst fruiting branch and its height in upland cotton (Gossypium hirsutum L.). Euphytica, DOI 10.1007/s10681-012-0720-2[39]Van Ooijen J W, Voorrips RE. JoinMap_ version 3.0: Software for the Calculation of Genetic Linkage Maps. Wageningen: Plant Research International, 2001[40]Kosambi D D. The estimation of map distances from recombination values. Ann Eugen, 1944, 12: 172–175[41]Han Z G, Guo W Z, Song X L, Zhang T Z. Genetic mapping of EST-derived microsatellites from the diploid Gossypium arboretum in allotetraploid cotton. Mol Gen Genet, 2004, 272: 308–327 [42]Guo W Z, Cai C P, Wang C B, Han Z G, Song X L, Wang K, Niu X W, Wang C, Lu K Y, Shi B, Zhang T Z. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics, 2007, 176: 527–541[43]Wang B H, Guo W Z, Zhu X F, Wu Y T, Huang N T, Zhang T Z. QTL mapping of fiber quality in an elite hybrid derived-RIL population of Upland Cotton. Euphytica, 2006, 152: 367–378[44]Zeng Z B. Precision mapping of quantitative trait loci. Genetics, 1994, 136: 1457–1468[45]McCouch S R, Cho Y G, Yano P E, Blinstrub M, Morishima H, Kinoshita T. Report on QTL nomenclature. Rice Genet Newsl, 1997, 14: 11–13[46]Liu K J, Muse S V. PowerMarker: an integrated analysis environment for genetic marker analysis. Bioinform Appl Note, 2005, 9: 2128–2129[47]Pritchard J K, Stephens M, Donnelly P. Inference of population structure using multilocus genotype data. Genetics, 2000, 155: 945–959[48]Pritchard J K, Przeworski M. Linkage disequilibrium in humans: models and data. Am J Hum Genet, 2001, 69: 1–14[49]Bradbury P J, Zhang Z W, Kroon D E, Casstevens T M, Ramdoss Y, Buckler E S. TASSEL: software for association mapping of complex traits in diverse samples. Bioinformatics, 2007, 23: 2633–2635 |
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