Welcome to Acta Agronomica Sinica,

Acta Agronomica Sinica ›› 2018, Vol. 44 ›› Issue (04): 620-626.doi: 10.3724/SP.J.1006.2018.00620

• RESEARCH NOTES • Previous Articles    

Cloning and Regulation Function Analysis of TaSC Promoter from Salt Tolerant Wheat

Bo JIAO(), Feng BAI, Yan-Yan LI, Jia LU, Xiao ZHANG, Yi-Ru CAO, Rong-Chao GE, Bao-Cun ZHAO*()   

  1. College of Life Science, Hebei Normal University, Shijiazhuang 050024, Hebei, China
  • Received:2017-08-22 Accepted:2018-01-08 Online:2018-01-26 Published:2018-01-26
  • Contact: Bao-Cun ZHAO E-mail:408850814@qq.com;baocunzh@126.com
  • Supported by:
    This study was supported by the National Natural Science Foundation of China (30871471) and the Natural Science Foundation of Hebei Province (C2011205085).

Abstract:

High salinity is one of the major abiotic stress factors in wheat. Exploring stress related genes from salt-tolerant wheat varieties and analyzing their regulatory mechanism are helpful for elucidating the salt tolerance mechanism in wheat. In this study, the promoter sequence of a salt-tolerant related gene TaSC, designated ProTaSC, was cloned from salt-tolerant wheat mutant RH8706-49 by TAIL-PCR and silicon cloning method. A series of cis-acting elements including abscisic acid response element (ABRE), MYB protein binding site (MBS), TATA-box and CAAT-box were predicted in the promoter region. Among them ABRE and MBS are involved in abiotic stress responses. Beta-glucuronidase gene was used as reporter to study the expression characteristic of ProTaSC, showing that the full-length fragment and two 5'-progressive deletion fragments (681 bp and 1096 bp) were able to trigger GUS expression. However, GUS expression was undetectable when the fragment was less than 343 bp. These results suggest that the full-length promoter has promoting activity and the sequence between -681 to -343 nucleotides is the basic core region of ProTaSC. ProTaSC is a tissue-specific promoter because GUS gene driven by full-length ProTaSC was expressed in root, leaf, anther, sepals, and mature pods, but not in stem, petal, young fruit, and seed of Arabidopsis harboring ProTaSC:GUS. Quantification of GUS activity assay showed that ProTaSC was induced significantly by NaCl (200 mmol L-1) and ABA (10 μmol L-1) in the transgenic Arabidopsis seedlings, indicating ProTaSC is a functional sequence induced by NaCl or ABA treatment.

Key words: wheat, salt-tolerant wheat mutant RH8706-49, TaSC promoter, TAIL-PCR, expression activity

Fig. 1

Schematic diagrams of 5' deletion fragments of TaSC promoter with different lengths for constructing GUS reporter vectors"

Fig. 2

Cloning of TaSC promoter A: electrophoretic pattern of genomic DNA of RH8706-49; B: TAIL-PCR amplification of TaSC promoter; C: amplification of TaSC promoter from RH8706-49; M: DL-2000 DNA ladder in 2000, 1000, 750, 500, 200, and 100 bp (from the top to the bottom); 1: profile of the tertiary TAIL-PCR amplification with SP3 and AD4 ( target band shown by the arrow); 2: profile of the secondary TAIL-PCR amplification with SP2 and AD4; 3: the amplification profile with SP3 primer only; 4: Amplification of TaSC promoter ProTaSC (target band shown by the arrow)."

Fig. 3

DNA Sequences of TaSC promoter in salt-tolerant wheat mutant RH8706-49 The amplification fragment of TAIL-PCR is shown by blue italic letters. TATA box and CAAT box are underlined with dotted and solid lines respectively. Shadow shows other functional cis-acting elements whose name remarks under the sequence. Among them, ABRE element (CACGTG) and MBS element (CAACTG) are related to stress response."

Fig. 4

GUS assay results of transgenic Arabidopsis harboring different lengths of ProTaSC promotor fragmentsA: transferred with the 1419 bp promotor; B: transferred with the 1096 bp promotor fragment; C: transferred with the 681 bp promotor fragment; D: transferred with the 343 bp promotor fragment; E: transferred with the 152 bp promotor fragment."

Fig. 5

GUS assay results of different tissues of Arabidopsis harboring full-length promoter ProTaSCA: root; B: stem leaf; C: rosette leaf; D: floral, young pot and stem; E: blooming flower; F: mature pod."

Fig. 6

Quantification of GUS activity in transgenic Arabidopsis under different stresses** and *** indicate significant between the stress treatment and the control (0 h) at the 0.01 and 0.001 probability level, respectively (t-test)."

Supplementary Fig. 6

Alignment of ProTaSC+TaSC sequence from salt-tolerant wheat RH8706-49 and genomic DNA sequence from Chinese spring (Triticum aestivum L.)ProTaSC+TaSC: the cDNA sequence (557 bp) and its promoter sequence (1419 bp) of TaSC gene in RH8706-49. Red bars show the start (ATG) and stop codon (TAA) of TaSC. Traes_5DL_50BA3A: the 4266 bp contiguous genomic DNA sequence of Chinese spring, containing 2290 bp of introns."

[1] Munns R, Gillihan M.Salinity tolerance of crops—what is the cost?New Phytol, 2015, 208: 668-673
[2] Zhang X K, Zhou Q H, Cao J H, Yu B J.Differential Cl-/salt tolerance and NaCl-induced alternations of tissue and cellular ion fluxes in Glycine max, Glycine soja and their hybrid seedlings. J Agron Crop Sci, 2011, 197: 329-339
[3] Hasegawa P M.Sodium (Na+) homeostasis and salt tolerance of plants.Environ Exp Bot, 2013, 92: 19-31
[4] Munns R, James R A, Läuchli A.Approaches to increasing the salt tolerance of wheat and other cereals. J Exp Bot, 2006, 57: 1025-1043
[5] Bohnert H J, Nelson D E, Jensen R G.Adaptations to environmental stresses.Plant Cell, 1995, 7: 1099-1111
[6] Holmström K, Mäntylä E, Welin B, Mandal A, Palva E.Drought tolerance in tobacco.Nature, 1996, 379: 683-684
[7] Becker D, Hoth S, Ache P, Wenkel S, Roelfsema M R G, Meyerhoff O, Hartung W, Hedrich R. Regulation of the ABA-sensitive Arabidopsis potassium channel gene GORK in response to water stress. FEBS Lett, 2003, 554: 119-126
[8] Yamaguchi-Shinozaki K, Shinozaki K.Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress- inducible transcription factor. In: Novartis Foundation Symposium, 2001, pp 176-186; 186-189
[9] Zhou M L, Ma J T, Zhao Y M, Wei Y H, Tang Y X, Wu Y M.Improvement of drought and salt tolerance in Arabidopsis and Lotus corniculatus by overexpression of a novel DREB transcription factor from Populus euphratica. Gene, 2012, 506: 10-17
[10] Xiao F H, Xue G P.Analysis of the promoter activity of late embryogenesis abundant protein genes in barley seedlings under conditions of water deficit.Plant Cell Rep, 2001, 20: 667-673
[11] Guo L, Yu Y H, Xia X L, Yin W L.Identification and functional characterization of the promoter of the calcium sensor gene CBL1 from the xerophyte Ammopiptanthus mongolicus. BMC Plant Biol, 2010, 10: 1-16
[12] Liu Y G, Whittier F R.Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking.Genomics, 1995, 25: 674-681
[13] 张晓, 张锐, 孙国清, 史计, 孟志刚, 周焘, 侯思宇, 梁成真, 于源华, 郭三堆. 优化的反向PCR结合TAIL-PCR法克隆棉花线粒体atpA双拷贝基因及其侧翼序列. 生物工程学报, 2012, 28: 104-115
Zhang X, Zhang R, Sun G Q, Shi J, Meng Z G, Zhou T, Hou S Y, Liang C Z, Yu Y H, Guo S D.High efficiency genome walking method for flanking sequences of cotton mitochondrial double-copy atpA gene based on optimized inverse PCR and TAIL-PCR.Biotechnol Bull, 2012, 28: 104-115 (in Chinese with English abstract)
[14] Chen X L, Song R T, Yu M Y, Sui J M, Wang J S, Qiao L X.Cloning and functional analysis of the chitinase gene promoter in peanut.Genet Mol Res, 2015, 14: 12710-12722
[15] Luo K, Zhang G F, Deng W, Luo F T, Qiu K, Pei Y.Functional characterization of a cotton late embryogenesis-abundant D113 gene promoter in transgenic tobacco.Plant Cell Rep, 2008, 27: 707-717
[16] Wu A M, Ling C, Liu J Y.Isolation of a cotton reversibly glycosylated polypeptide (GhRGP1) promoter and its expression activity in transgenic tobacco. J Plant Physiol, 2006, 163: 426-435
[17] Wu A, Liu J G.Isolation of the promoter of a cotton beta- galactosidase gene (GhGal1) and its expression in transgenic tobacco plants. Sci China C Life Sci, 2006, 49: 105-114
[18] Xu J Y, Cao J J, Cao D M, Zhao T T, Huang X, Zhang P Q, Luan F X.Flanking sequence determination and event-specific detection of genetically modified wheat B73-6-1.Acta Biochim Biophys Sin, 2013, 45: 416-421
[19] Hettiarachchi G H, Yadav V, Reddy M K, Chattopadhyay S, Sopory S K.Light-mediated regulation defines a minimal promoter region of TOP2.Nucl Acids Res, 2003, 31: 5256-5265
[20] Huang X, Zhang Y, Jiao B, Chen G P, Huang S H, Guo F, Shen Y Z, Huang Z J, Zhao B C.Overexpression of the wheat salt tolerance-related gene TaSC enhances salt tolerance in Arabidopsis, J Exp Bot, 2012, 63: 5463-5473
[21] 沈银柱, 刘植义, 何聪芬, 黄占景, 孟庆昌, 柏峰, 马闻师, 赵松山, 陆莉, 张焕英. 诱发小麦花药愈伤组织及其再生植株抗盐性变异的研究. 遗传, 1997, 45(6): 7-11
Shen Y Z, Liu Z Y, He C F, Huang Z J, Meng Q C, Bai F, Ma W S, Zhao S S, Lu L, Zhang H Y.A Study of salt-resistant variations induced in anther calli and regenerated plants in wheat.Hereditas(Beijing), 1997, 45(6): 7-11 (in Chinese with English abstract)
[22] Allen G C, Flores-Vergara M A, Krasynanski S, Kumar S, Thompson W F. A modified protocol for rapid DNA isolation from plant tissues using cetyltrimethylammonium bromide.Nat Protoc. 2006, 1: 2320-2325
[23] Liu Y G, Chen Y L.High-efficiency thermal asymmetric interlaced PCR for amplification of unknown flanking sequences.Biotechniques. 2007, 43: 649-656
[24] An G.Binary Ti vectors for plant transformation and promoter analysis.Methods Enzymol, 1987, 153: 292-305
[25] Clough S J, Bent A F.Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J, 1998, 16: 735-743
[26] Jefferson R A, Kavanagh T A, Bevan M W.GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants.EMBO J, 1987, 6: 3901-3907
[27] Bradford M M.A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein dye binding.Anal Biochem, 1976, 72: 248-254
[28] Kasuga M, Miura S, Shinozaki K, Yamaguchi-Shinozaki K.A combination of the Arabidopsis DREB1A gene and stress- inducible rd29A promoter improved drought- and low-temperature stress tolerance in tobacco by gene transfer. Plant Cell & Physiol, 2004, 45: 346-350
[29] Chen M, Xu Z S, Xia L Q, Li L C, Cheng X G, Dong J H, Wang Q Y, Ma Y Z.Cold-induced modulation and functional analyses of the DRE-binding transcription factor gene,GmDREB3, in soybean(Glycine max L.). J Exp Bot, 2009, 60: 121-135
[30] Nakashima K, Tran L S, Van Nguyen D, Fujita M, Maruyama K, Todaka D, Ito Y, Hayashi N, Shinozaki K, Yamaguchi-Shinozaki K.Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice.Plant J, 2007, 51: 617-630
[31] Jeong J S, Kim Y S, Baek K H, Jung H, Ha S H, Choi Y D, Kim M, Reuzeau C, Kim J K.Root-specific expression of OsNAC10 improves drought tolerance and grain yield in rice under field drought conditions.Plant Physiol, 2010, 153: 185-197
[32] Klingler J P, Batelli G, Zhu J K.ABA receptors: the START of a new paradigm in phytohormone signalling. J Exp Bot, 2010, 61: 3199-3210
[33] Fujii H, Verslues P E, Zhu J K.Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo. Proc Natl Acad Sci USA, 2011, 108: 1717-1722
[34] Wang R, Jing W, Xiao L Y, Jin Y K, Shen L K, Zhang W H.The rice high-affinity potassium transporter1;1 is involved in salt tolerance and regulated by an MYB-type transcription factor 1.Plant Physiol, 2015, 168: 1076-1090
[1] Mao Jia-Qi, Huang Peng-Yu, Zhao Jia-Jia, Zheng Xing-Wei, Wu Bang-Bang, Hao Yu-Qiong, Qu Fei, Liu Cheng, Ma Peng-Tao, Zheng Jun. Evaluation of powdery mildew resistance in wheat cultivars and molecular detection of resistance genes in Shanxi province, China [J]. Acta Agronomica Sinica, 2026, 52(6): 1669-1681.
[2] Hu Chuan, Zhao Kai-Nan, Huang Xiu-Li, Wu Jin-Zhi, Ren Kai-Ming, Wang He-Zheng, Fu Guo-Zhan, Huang Ming, Li You-Jun. Effects of tillage methods and nitrogen rates on yield and quality of dryland wheat under one-off irrigation [J]. Acta Agronomica Sinica, 2026, 52(6): 1830-1846.
[3] Chen Xue-Yan, He Hua-Chuan, Li Zheng-Jia, Dong Xin-Pan, Li Ou-Qi, Liu Xiao-Yun, Li Dan-Ping, Chen Zhi-Wei, Liu Guo-Xia, Lyu Sheng-Yuan, Wu Yin-Ying, Zhao Zhen-Dong, Cao Xin-You, Wan He-Ping. Dynamic changes in root organic acid secretion and its transcriptional regulatory mechanisms in ‘Jimai 60’ seedlings under combined salinity-alkalinity stress in hydroponics [J]. Acta Agronomica Sinica, 2026, 52(6): 1859-1875.
[4] Gao Pei-Yang, Li Jin-Xuan, Dong Yu-Kui, Shi Yu, Zhang Zhen, Zhang Yong-Li. Response of wheat tillering and spike formation to nitrogen rate under supplementary irrigation based on soil moisture content [J]. Acta Agronomica Sinica, 2026, 52(6): 1847-1858.
[5] Zhang Xian-Feng, Guo Li-Jian, Li Kang-Chun, Kong Bin-Xue, Liu Yu-Fang, Che Zhuo, Yang De-Long. Identification of the ABHD6 gene family and development of functional markers for grain weight in wheat [J]. Acta Agronomica Sinica, 2026, 52(6): 1711-1727.
[6] Zhai Sheng-Nan, Cao Xin-You, Li Hao-Sheng, Li Ji-Hu, Li Fa-Ji, Liu Jin-Dong, Xia Xian-Chun, Lyu Ying-Ying, Ma Rui-Feng, Wang Ying, Geng Hong-Wei, Liu Jian-Jun. Analysis of the genetic effects of allelic variation at the Pod-A1, Pod-D1, and Pod-2D loci on peroxidase activity in wheat grains [J]. Acta Agronomica Sinica, 2026, 52(6): 1593-1603.
[7] Xi Qian-Hui, Xu Zi-Yuan, Liu Meng-Meng, Wang Hong-Yi, Lang Kai-Lin, Jing Zhen-Hai, Chen Feng, Zhao Lei. Genome-wide association study and candidate gene prediction of grain copper content in wheat [J]. Acta Agronomica Sinica, 2026, 52(6): 1604-1617.
[8] Wang Zhuang-Zhuang, Wu Zi-Jun, Zhang Yong-Xin, Zhang Xin-Yuan, Yuan Li-Xue, Chen Ru-Xue, Liu Shi-Ju, Duan Jian-Zhao, Feng Wei, Wang Tong-Chao, Wang Yong-Hua. Optimized water-nitrogen synergy enhances winter wheat yield and nitrogen use efficiency in clay-loam fluvo-aquic soils of southeastern Henan, China [J]. Acta Agronomica Sinica, 2026, 52(5): 1501-1521.
[9] He Wan-Long, Geng Hong-Wei, Zhang Fei-Fei, Mikereayi·Ababaikere , Luo Zi-Yang, Li Peng-Cheng, Zhou Zhao-Yu, Cheng Yu-Kun. Development of a deep learning-based image recognition system for major wheat diseases [J]. Acta Agronomica Sinica, 2026, 52(5): 1401-1417.
[10] Zhang Zhen, Feng Lian-Jie, Shi Yu, Yu Zhen-Wen, Zhang Yong-Li. Yield formation of wheat with different ear types under water-saving supplementary irrigation conditions [J]. Acta Agronomica Sinica, 2026, 52(5): 1522-1535.
[11] Hou Si-Yu, Wang Guo-Cui, Wei Jin-Gui, Xie Wei-Xin, Yin Wen, Fan Zhi-Long, Chai Qiang, Hu Fa-Long. Effects of green manure combined with chemical nitrogen fertilizer on dry matter accumulation and yield formation of wheat in arid irrigation areas of northwestern China [J]. Acta Agronomica Sinica, 2026, 52(4): 1208-1219.
[12] Shang Yun-Qiu, Zhao Zhu, Chen Huan, Ding Yong-Gang, Qiao Yu-Qiang, Li Wei, Zhang Xiang-Qian, Cao Cheng-Fu, Du Shi-Zhou. Effects of long-term tillage practices on grain-filling and yield formation in rain-fed wheat [J]. Acta Agronomica Sinica, 2026, 52(4): 1236-1250.
[13] Qiao Yu-Xin, Li Cheng-Yue, Kang Xiao-Yu, Zhang Xin-Qi, Jia Shao-Hui, Liu Qian, Cao Ya-Li, Shi Xin-Rui, Hao Xing-Yu, Li Ping. Study on the effects of long-term no-tillage straw mulching on wheat yield improvement in dryland areas based on the APSIM model [J]. Acta Agronomica Sinica, 2026, 52(4): 1181-1192.
[14] Li Can, Zhang Xi-Wei, Zhu Bo-Tao, Zhang Pei-Pei. Functional characterization of wheat GSK kinase TaSK41 and screening for interacting proteins [J]. Acta Agronomica Sinica, 2026, 52(3): 677-687.
[15] Hou Jie, Fu Duo-Duo, Wu Hai-Feng, Hao Yu-Qiong, Zheng Xing-Wei, Wu Bang-Bang, Zhou Kai, Li Xiao-Hua, Zheng Jun, Zhao Jia-Jia. Chromosome diversity and its effects in wheat landraces from Shanxi province, China [J]. Acta Agronomica Sinica, 2026, 52(3): 746-763.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!