欢迎访问作物学报,今天是

作物学报 ›› 2007, Vol. 33 ›› Issue (10): 1696-1702.

• 研究论文 • 上一篇    下一篇

以SRAP和EST-SSR标记分析芝麻种质资源的遗传多样性

张鹏1,张海洋2,*,郭旺珍1,郑永战2,魏利斌1,张天真1   

  1. 1 南京农业大学作物遗传与种质创新国家重点实验室,江苏南京210095; 2河南省农作物新品种重点实验室,河南郑州450002
  • 收稿日期:2007-02-12 修回日期:1900-01-01 出版日期:2007-10-12 网络出版日期:2007-10-12
  • 通讯作者: 张海洋

Genetic Diversity Analysis of Sesamum indicum L. Germplasms Using SRAP and EST-SSR Markers

ZHANG Peng1, ZHANG Hai-Yang 2,* , GUO Wang-Zhen1, ZHENG Yong-Zhan2, WEI Li-Bin1, ZHANG Tian-Zhen1   

  1. 1 National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, Jiangsu; 2 Henan Key Laboratory of Crop Improvement, Zhengzhou 450002, Henan, China
  • Received:2007-02-12 Revised:1900-01-01 Published:2007-10-12 Published online:2007-10-12
  • Contact: ZHANG Hai-Yang

摘要:

利用SRAP和EST-SSR分子标记对192份国内外芝麻种质资源进行遗传多样性分析。结果表明,2种标记都能很好地揭示品种间遗传关系;在31对SRAP引物组合扩增的270个等位基因中多态性占62.08%,平均每对引物可以检测5.45个;25对SSR引物扩增的136个等位基因中56.28%呈多态性,平均每对检测引物产生3.04个。UPGMA聚类结果显示,在相似性系数为0.70时,192份材料可被分为3个类群;阈值为0.75时类群Ⅰ又可分为6组,表明芝麻品种遗传多样性比较丰富。我国南部地区芝麻品种遗传多样性(多样性指数Hi=2.572)较中部(Hi=2.117)和北部地区 (Hi=2.114)丰富。分析结果将有助于更好地保护和利用芝麻种质资源,并为育种工作提供依据。

关键词: 芝麻, SRAP, EST-SSR, 遗传多样性

Abstract:

Sesame (Sesamum indicum L.), an important oil-yielding plant, is one of the most ancient crops in tropical and subtropical areas. Despite its nutritional value and importance, the research on sesame has been scarce. In this study genetic relationships among 134 Chinese sesames, 41 alien sesames, and 17 improved cultivars were analysed using SRAP and EST-SSR markers. Large genetic variability was found within all the germplasm collection. A total of 270 SRAP markers were recorded using 31 primer combinations, each primer detected 5.45 loci; While 25 pairs of SSR amplified 136 loci, each primer detected 3.04 loci. Mantel test revealed that the relation of genetic similarity matrix between SRAP and SSR was significant (r=0.7864, t=5.2571, P<0.01) for 192 species, so the UPGMA dendrogram was set up based on the integrated data of SRAP and SSR. The 192 accessions were grouped into three robust clusters, and cluster Ⅰ consisted of six groups, which was not revealed any association between genotype and geographical origin. Accessions came from one region were distributed throughout the dendrogram. The results revealed by the genetic distance and Shannor-weaver index of sesame germplasm resources from different regions that the genetic diversity of sesame was high, and in our nation the southern was higher than the others. We presumed that the sesame species was introduced to the Southern China firstly, of course it needs other evidence to be substantiated. The cluster result suggests that there was a considerable gene flow among different regions. So when we choose the parents in sesame breeding focusing on the genetic relationships is a good strategy.

Key words: Sesamum indicum L., SRAP, EST-SSR, Genetic diversity

[1] 肖颖妮, 于永涛, 谢利华, 祁喜涛, 李春艳, 文天祥, 李高科, 胡建广. 基于SNP标记揭示中国鲜食玉米品种的遗传多样性[J]. 作物学报, 2022, 48(6): 1301-1311.
[2] 王琰琰, 王俊, 刘国祥, 钟秋, 张华述, 骆铮珍, 陈志华, 戴培刚, 佟英, 李媛, 蒋勋, 张兴伟, 杨爱国. 基于SSR标记的雪茄烟种质资源指纹图谱库的构建及遗传多样性分析[J]. 作物学报, 2021, 47(7): 1259-1274.
[3] 刘少荣, 杨扬, 田红丽, 易红梅, 王璐, 康定明, 范亚明, 任洁, 江彬, 葛建镕, 成广雷, 王凤格. 基于农艺及品质性状与SSR标记的青贮玉米品种遗传多样性分析[J]. 作物学报, 2021, 47(12): 2362-2370.
[4] 孙倩, 邹枚伶, 张辰笈, 江思容, Eder Jorge de Oliveira, 张圣奎, 夏志强, 王文泉, 李有志. 基于SNP和InDel标记的巴西木薯遗传多样性与群体遗传结构分析[J]. 作物学报, 2021, 47(1): 42-49.
[5] 赵孟良,王丽慧,任延靖,孙雪梅,侯志强,杨世鹏,李莉,钟启文. 257份菊芋种质资源表型性状的遗传多样性[J]. 作物学报, 2020, 46(5): 712-724.
[6] 张红岩,杨涛,刘荣,晋芳,张力科,于海天,胡锦国,杨峰,王栋,何玉华,宗绪晓. 利用EST-SSR标记评价羽扇豆属(Lupinus L.)遗传多样性[J]. 作物学报, 2020, 46(3): 330-340.
[7] 刘易科,朱展望,陈泠,邹娟,佟汉文,朱光,何伟杰,张宇庆,高春保. 基于SNP标记揭示我国小麦品种(系)的遗传多样性[J]. 作物学报, 2020, 46(02): 307-314.
[8] 叶卫军,陈圣男,杨勇,张丽亚,田东丰,张磊,周斌. 绿豆SSR标记的开发及遗传多样性分析[J]. 作物学报, 2019, 45(8): 1176-1188.
[9] 吴迷,汪念,沈超,黄聪,温天旺,林忠旭. 基于重测序的陆地棉InDel标记开发与评价[J]. 作物学报, 2019, 45(2): 196-203.
[10] 卢媛,艾为大,韩晴,王义发,李宏杨,瞿玉玑,施标,沈雪芳. 糯玉米自交系SSR标记遗传多样性及群体遗传结构分析[J]. 作物学报, 2019, 45(2): 214-224.
[11] 薛延桃,陆平,史梦莎,孙昊月,刘敏轩,王瑞云. 新疆、甘肃黍稷资源的遗传多样性与群体遗传结构研究[J]. 作物学报, 2019, 45(10): 1511-1521.
[12] 刘洪,徐振江,饶得花,鲁清,李少雄,刘海燕,陈小平,梁炫强,洪彦彬. 基于形态学性状和SSR标记的花生品种遗传多样性分析和特异性鉴定[J]. 作物学报, 2019, 45(1): 26-36.
[13] 杨文娟,张艳欣,王林海,魏鑫,黎冬华,高媛,刘盼,张秀荣. 一个芝麻应用核心种质的DNA分子身份证构建[J]. 作物学报, 2018, 44(7): 1010-1020.
[14] 白冬梅,薛云云,赵姣姣,黄莉,田跃霞,权宝全,姜慧芳. 山西花生地方品种芽期耐寒性鉴定及SSR遗传多样性[J]. 作物学报, 2018, 44(10): 1459-1467.
[15] 魏中艳, 李慧慧, 李骏, YasirA.Gamar, 马岩松, 邱丽娟. 应用SNP精准鉴定大豆种质及构建可扫描身份证[J]. 作物学报, 2018, 44(03): 315-323.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!