Acta Agronomica Sinica ›› 2019, Vol. 45 ›› Issue (6): 829-838.doi: 10.3724/SP.J.1006.2019.84111
• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles Next Articles
Rui WANG1,*,Liang LING2,*,Peng-Jie ZHAN1,Ji-Zhen YU1,Jian-Qiang CHU1,Jun-Ai PING1,*(),Fu-Yao ZHANG1,*(
)
[1] | 邹剑秋, 朱凯, 张志鹏, 黄先伟 . 国内外高粱深加工研究现状与发展前景. 杂粮作物, 2002,22(5):296-298. |
Zou J Q, Zhu K, Zhang Z P, Huang X W . Status and prospects of research on sorghum deep processing at home and abroad. Rain Fed Crops, 2002,22(5):296-298 (in Chinese with English abstract). | |
[2] | 吕富堂, 韩爱清, 杜秀兰, 张福耀, 李团银 . 建国以来中国高粱发展历程及发展趋势. 山西农业科学, 2002,30(3):20-24. |
Lyu F T, Han A Q, Du X L, Zhang F Y, Li T Y . Development and tendency of Chinese sorghum since the founding of P R China. J Shanxi Agric Sci, 2002,30(3):20-24 (in Chinese with English abstract). | |
[3] | 白文斌, 张福跃, 焦晓燕, 董良利, 柳青山, 平俊爱 . 中国高粱产业工程技术研究的定位思考. 中国农学通报, 2013,29(11):107-110. |
Bai W B, Zhang F Y, Jiao X Y, Dong L L, Liu Q S, Ping J A . The fixed position thought of sorghum engineering technology research in china. Chin Agric Sci Bull, 2013,29(11):107-110 (in Chinese with English abstract). | |
[4] | 张福耀, 平俊爱 . 高粱的根本出路在于机械化. 农业技术与装备, 2012, ( 20):19-21. |
Zhang F Y, Ping J A . The fundamental way of sorghum is mechanization. Agric Technol Equip, 2012, ( 20):19-21 (in Chinese with English abstract). | |
[5] | 焦少杰, 王黎明, 姜艳喜, 严洪冬, 苏德峰, 孙广全 . 粒用高粱机械化栽培品种选择. 园艺与种苗, 2012, ( 12):1-2. |
Jiao S J, Wang L M, Jiang Y X, Yan H D, Su D F, Sun G Q . Varieties selection of grain sorghum for mechanized cultivation. Hortic Seed, 2012, ( 12):1-2 (in Chinese with English abstract). | |
[6] |
Quinby J R, Karper R E . Inheritance of height in sorghum. Agronomy, 1954,46:212-216.
doi: 10.2134/agronj1954.00021962004600050007x |
[7] |
Pereira M G, Lee M, Bramel-Cox P, Woodman W, Doebley J, Whitkus R . Construction of an RFLP map in sorghum and comparative mapping in maize. Genome, 1994,37:236-243.
doi: 10.1139/g94-033 pmid: 18470074 |
[8] |
Lin Y R, Schertz K F, Paterson A H . Comparative analysis of QTLs affecting plant height and maturity across the Poaceae, in reference to an interspecific sorghum population. Genetics, 1995,141:391-411.
doi: 10.1101/gad.9.17.2193 pmid: 8536986 |
[9] |
Rami J F, Dufour P, Trouch G, Fliedel G, Mestres C, Davrieux F, Blanchard P, Hamon P . Quantitative trait loci for grain quality, productivity, morphological and agronomical traits in sorghum ( Sorghum bicolor L. Moench). Theor Appl Genet, 1998,97:605-616.
doi: 10.1007/s001220050936 |
[10] |
Klein R R, Rodrigyez-Herrera R, Schlueter J A . Identification of genomic regions that affect grain-mould incidence and other traits of agronomic importance in sorghum. Theor Appl Genet, 2001,102:307-319.
doi: 10.1007/s001220051647 |
[11] |
Upadhyaya H D, Wang Y H, Sharma S, Singh S . Association mapping of height and maturity across five environments using the sorghum mini core collection. Genome, 2012,55:471-479.
doi: 10.1139/g2012-034 pmid: 22680231 |
[12] |
Upadhyaya H D, Wang Y H, Gowda C L, Sharma S . Association mapping of maturity and plant height using SNP markers with the sorghum mini core collection. Theor Appl Genet, 2013,126:2003-2015.
doi: 10.1007/s00122-014-2318-7 pmid: 23649651 |
[13] | Harris-Shultz K R, Davis R F, Knoll J E, Anderson W, Wang H . Inheritance and identification of a major quantitative trait locus (QTL) that confers resistance to Meloidogyne incognita and a novel QTL for plant height in sweet sorghum. Phytopathology, 2015,105:1522-1528. |
[14] | 苏舒 . 高粱形态学农艺性状的QTL定位研究. 南京大学硕士学位论文, 江苏南京, 2012. |
Su S . QTL Mapping of Agronomic Traits of Morphology in Sorghum. MS Thesis of Nanjing University, Nanjing, Jiangsu,China, 2012 (in Chinese with English abstract). | |
[15] | 刘娟 . 高粱株高和抗蚜连锁标记的发掘与验证. 河北农业大学硕士学位论文, 河北保定, 2014. |
Liu J . Discover and Validation of Markers Linkage with Plant Height and Resistance to Aphid of Sorghum. MS Thesis of Agricultural University of Hebei, Baoding, Hebei, China, 2014 (in Chinese with English abstract). | |
[16] |
Lafarge T A, Broad J, Hammer G L . Tillering in grain sorghum over a wide range of population densities: identification of a common hierarchy for tiller emergence, leaf area development and fertility. Ann Bot, 2002,90:87-98.
doi: 10.1093/aob/mcf152 pmid: 4233856 |
[17] | Feltus F A, Hart G E, Schertz K F, Casa A M, Kresovich S, Abraham S, Klein P E, Brown P J, Paterson A H . Alignment of genetic maps and QTLs between inter- and intra-specific sorghum populations. Theor Appl Genet, 2006,112:1295-1305. |
[18] | Shehzad T, Iwata H, Okuno K . Genome-wide association mapping of quantitative traits in sorghum ( Sorghum bicolor( L.) Moench) by using multiple models. Breed Sci, 2009,59:217-227. |
[19] | Shiringani A L, Frisch M, Friedt W . Genetic mapping of QTLs for sugar-related traits in a RIL population of Sorghum bicolor L. Moench. Theor Appl Genet, 2010,121:323-336. |
[20] | 董维, 苏舒, 游录鹏, 黄守程, 戚金亮, 陆桂华, 黄应华, 杨永华 . 高粱F6代群体分蘖数的QTL定位. 南京林业大学学报(自然科学版), 2013,37(2):55-58. |
Dong W, Su S, You L P, Huang S C, Qi J L, Lu G H, Huang Y H, Yang Y H . QTLs analysis of tillers number in F6 sorghum population. J Nanjing For Univ( Nat Sci Edn), 2013,37(2):55-58 (in Chinese with English abstract). | |
[21] |
Kozich J J, Westcott S L, Baxter N T, Highlander S K, Schloss P D . Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the miseq illumina sequencing platform. Appl Environ Microbiol, 2013,79:5112-5120.
doi: 10.1128/AEM.01043-13 pmid: 23793624 |
[22] |
International Rice Genome Sequencing Project. The map-based sequence of the rice genome. Nature, 2005,436:793-800.
doi: 10.1038/nature03895 pmid: 16100779 |
[23] |
Abe A, Kosugi S, Yoshida K, Natsume S, Takagi H, Kanzaki H, Matsumura H, Yoshida K, Mitsuoka C, Tamiru M, Innan H, Cano L, Kamoun S, Terauchi R . Genome sequencing reveals agronomically important loci in rice using MutMap. Nat Biotechnol, 2012,30:174-178.
doi: 10.1038/nbt.2095 pmid: 22267009 |
[24] |
Hill J T, Demarest B L, Bisgrove B W, Gorsi B, Su Y C, Yost H J . MMAPPR: mutation mapping analysis pipeline for pooled RNA-seq. Genome Res, 2013,23:687-697.
doi: 10.1101/gr.146936.112 pmid: 23299975 |
[25] |
Li H, Durbin R . Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics, 2009,25:1754-1760.
pmid: 2705234 |
[26] |
Takagi H, Abe A, Yoshida K, Kosugi S, Natsume S, Mitsuoka C, Uemura A, Utsushi H, Tamiru M, Takuno S, Innan H, Cano L M, Kamoun S, Terauchi R . QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations. Plant J, 2013,74:174-183.
doi: 10.1111/tpj.12105 pmid: 23289725 |
[27] | 贺捷 . 甜高粱分蘖特性国内研究进展. 中国糖料, 2017,39(2):65-67. |
He J . Research progresses on tillering characteristics of sweet sorghum in China. Sugar Crops China, 2017,39(2):65-67 (in Chinese with English abstract). | |
[28] | 詹鹏杰, 张福耀, 王瑞, 于纪珍, 李燕 . 适宜机械化生产酿造高粱汾酒粱1号的选育. 安徽农业科学, 2016,44(31):13-14. |
Zhan P J, Zhang F Y, Wang R, Yu J Z, Li Y . Breeding of Fenjiuliang No.1: a brewing sorghum suitable for mechanized production. J Anhui Agric Sci, 2016,44(31):13-14 (in Chinese with English abstract). | |
[29] |
Brown P J, Klein P E, Bortiri E, Acharya C B, Rooney W L, Kresovich S . Inheritance of inflorescence architecture in sorghum. Theor Appl Genet, 2006,113:931-942.
doi: 10.1109/LPT.2002.806092 pmid: 16847662 |
[30] | Shiringani A L, Frisch M, Friedt W . Genetic mapping of QTLs for sugar-related traits in a RIL population of Sorghum bicolor L. Moench. Theor Appl Genet, 2010,121:323-336. |
[31] | 王柏柯, 李宁, 唐亚萍, 王强, 杨涛, 杨生保, 帕提古丽, 余庆辉, 高杰 . 基于简化基因组测序技术的番茄雄性不育基因定位. 西北农林科技大学学报(自然科学版), 2017,45(6):177-184. |
Wang B K, Li N, Tang Y P, Wang Q, Yang T, Yang S B, Pati G L, Yu Q H, Gao J . Mapping male-sterile gene in tomato by specific length amplified fragment sequencing. J Northwest A&F Univ(Nat Sci Edn). 2017,45(6):177-184 (in Chinese with English abstract). | |
[32] | 王伟, 刘凡, 任莉, 徐理, 陈旺, 曾令益, 黄炳文, 方小平 . 采用SLAF-seq技术开发甘蓝型油菜霜霉病抗性SNP位点. 中国油料作物学报, 2016,38:555-562. |
Wang W, Liu F, Ren L, Xu L, Chen W, Zeng L Y, Huang B W, Fang X P . Resistance SNP development to downy mildew in Brassica napus using SLAF-seq technique. Chin J Oil Crop Sci, 2016,38:555-562 (in Chinese with English abstract). | |
[33] |
Geng X, Jiang C, Yang J, Wang L, Wu X, Wei W . Rapid identification of candidate genes for seed weight using the SLAF-Seq method in Brassica napus. PLoS One, 2016,11:e0147580.
doi: 10.1371/journal.pone.0147580 pmid: 26824525 |
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