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Acta Agron Sin ›› 2012, Vol. 38 ›› Issue (06): 1135-1139.doi: 10.3724/SP.J.1006.2012.01135

• RESEARCH NOTES • Previous Articles    

Relationships and Genetic Diversity of Colored-Grain Wheat Detected by SSR Markers

HUANG Wei,YANG Min,QIN Bao-Ping,WANG Zhen-Lin,WU Yu-Guo,SUN Lan-Zhen,YIN Yan-Ping*   

  1. State Key Laboratory of Crop Biology / Shandong Provincial Key Laboratory of Crop Biology / Agronomy College of Shandong Agricultural University, Tai’an 271018, China
  • Received:2011-11-28 Revised:2012-02-22 Online:2012-06-12 Published:2012-04-06
  • Contact: 尹燕枰, E-mail: ypyinsdau@sina.com, Tel: 0538-8242458 E-mail:huangwei5616@163.com

Abstract: To reveal the relationship and genetic diversity of colored-grain wheat, we analyzed 18 varieties (lines) with red, purple, blue, and black seed coats using 305 polymorphic SSR markers. A total of 1084 alleles were detected with 3.6 alleles per locus. The allele numbers in seven homoeologous groups (HG) were aligned as HG3>HG2>HG1>HG4>HG5>HG7>HG6 in red and purple wheat and HG3>HG2>HG1 and HG 4>HG5>HG7>HG6 in black and blue wheat. The polymorphic information content (PIC) values in the seven homoeologous groups were similar, which were 0.525–0.543 in red and purple wheat and 0.517–0.545 in black and blue wheat. Among the 18 colored-grain varieties (lines), genetic difference was significant (P = 0.0001), and the genetic similarity coefficients ranged from 0.41 to 0.76. According to UPGMA analysis, the 18 varieties (lines) were classified into six groups, which were in relation to variety kindred and geographic distance.

Key words: Colored-grain wheat, SSR markers, Genetic diversity

[1]Zhou G-J(周桂娟), Wang K(王坤), Liu J-M(刘佳明), Sun H-J(孙慧君), Li J-L(李集临), Zhang J(张杰). The pigment color wheat spectroscopic and antioxidant properties. Chin Agric Sci Bull(中国农学通报), 2011, 27(5): 109-114 (in Chinese with English abstract)

[2]Ma D(马东), Yin Y-P(尹燕枰), Sun L-Z(孙兰珍), Wu Y-H(邬云海), Tang X-Z(唐晓珍), Li J-M(李建敏), Wang Z-L(王振林). Comparison of protein and mineral nutrition contents of different milling streams between black and white wheat cultivars. Science Paper Online (中国科技论文在线).[2011-9-11] http://www.paper.edu.cn (in Chinese with English abstract)

[3]Tang X-Z(唐晓珍), Liu B(刘宾), Jiang Y(姜媛), Sun L-Z(孙兰珍), Yin Y-P(尹燕枰). Technological conditions for extraction of pigment from purple wheat bran by acidified alcohol. J Chin Cereals Oils Assoc (中国粮油学报), 2008, 23(5): 24-27 (in Chinese with English abstract)

[4]Wang Y-Y(王耀勇), Wang C-Y(王长有), Ji W-Q(吉万全), Wang Q-H(王秋会). Pigment’s stability in grains of wheat with blue grain or violet grain. J Triticeae Crops (麦类作物学报), 2008, 28(2) :316-320 (in Chinese with English abstract)

[5]Tang X-Z(唐晓珍), Wang Z(王征), Zhang X-S(张宪省), Wang X-D(王晓东), Sun L-Z(孙兰珍), Yin Y-P(尹燕枰). Red and black Tai’an wheat lines: nutritional quality evaluation. J Chin Cereals Oils Assoc (中国粮油学报), 2009, 24(4): 28-31 (in Chinese with English abstract)

[6]Wang H-W(王海伟), Wang Z-L, Wang P (王平), Wang S-G(王树刚), Huang W(黄玮), Wu Y-G(武玉国), Sun L-Z(孙兰珍), Yin Y-P(尹燕枰). Effect of shading post anthesis on anthocyanin accumulation and activities of related enzymes in colored-grain wheat. Acta Agron Sin (作物学报), 2011, 37(6): 1093−1100 (in Chinese with English abstract)

[7]Sun Q(孙群), Sun B-Q(孙宝启), Wang J-H(王建华). Genetic of seed pigment of black kernel wheat. Seed (种子), 2003, (4): 33-34 (in Chinese with English abstract)

[8]Lan S-Q(兰素缺), Li X-P(李杏普), Liu Y-P(刘玉平). Genetic of seed pigment of blue kernel wheat. Acta Agric Boreali-Sin (华北农学报), 2008, 23(suppl-1): 12-14 (in Chinese with English abstract)

[9]Liu C(刘成), Yang Z-J(杨足君), Feng J(冯娟), Zhou J-P(周建平), Chi S-H(迟世华), Ren Z-L(任正隆). Development of Dasypyrum genome specific marker by using wheat microsatellites. Hereditas (遗传), 2006, 28(12): 1573-1579 (in Chinese with English abstract)

[10]Li X-J(李学军), Pan Y-M(潘玉朋), Wang X-L(王小利), Li L-Q(李立群), Wang P(王培), Feng Y(冯毅), Wang H(王辉). Evolution of genetic diversity of the wheat varieties grown at Shananxi. J Northwest A&F Univ (西北农林科技大学学报), 2011, 39(4): 48-54 (in Chinese with English abstract)

[11]Pan Y-P(潘玉朋), Li L-Q(李立群), Zheng J-J(郑锦娟), Wang P(王培), Feng Y(冯毅), Li X-J(李学军). Analysis of genetic diversity of the large-scale promoted wheat varieties grown at Huang-Huai area in recent years. Acta Agric Boreali-Occid Sin (西北农业学报), 2011, 20(4): 47-52 (in Chinese with English abstract)

[12]Li J-Z(李建钊), Li Z-H(李志辉). Analysis of developed varieties of black wheat. China Seed Ind (中国种业), 2007, (10): 17-19 (in Chinese)

[13]Han L-M(韩利明), Zhang Y(张勇), Peng H-R(彭惠茹), Qiao W-C(乔文臣), He M-Q(何明琦), Wang H-G(王洪刚), Qu Y-Y(曲延英), Liu C-L(刘春来), He Z-H(何中虎). Analysis of heat resistance for cultivars from north China winter wheat region by yield and quality traits. Acta Agron Sin (作物学报), 2010, 36(9): 1538-1546 (in Chinese with English abstract)

[14]Zhao Y(赵琰), Qin L-Y(秦丽燕), Yang W(杨伟), Liang R-Q(梁荣奇), You M-S(尤明山), Liu G-T(刘广田). Analysis on distribution of grain iron content in 83 common wheat varieties. Chin Agric Sci Bull(中国农学通报), 2010, 26(23): 126-129 (in Chinese with English abstract)

[15]Wang Q-Y(王秋叶), Zhang J-C(张建诚), Guo Z-Y(郭志远), Yao J-Z(姚景珍). Breeding and characteristics of Wumai 526. Crop Germplasm Resour (作物品种资源), 1998, (3): 22-24 (in Chinese)

[16]Zhang G-W(张国武), Zhou Y-Z(周彦中), Zhang C-Y(张春映), Li J-Z(李建钊). Breeding and characteristics of black wheat Luozhen 1. Henan Agric Sci (河南农业科学), 1997, (8): 10 (in Chinese)

[17]Song W(宋伟), Sun L-Z(孙兰珍), Zhao A-H(赵爱红), Liu Q(刘青). Nutrition qualitative analysis and verification of colorful wheat variant offspring produced by exogenous DNA introduction. Acta Bot Borea1i-Occident Sin (西北植物学报), 2004, 24(6): 966-970 (in Chinese with English abstract)

[18]Zhou H-P(周汉平), Li B(李壁), Li Z-S(李振声). The study of breeding blue-grain translocation of wheat. Acta Bot Borea1i-Occident Sin (西北植物学报), 1995, 15(2): 125-128 (in Chinese with English abstract) 

[19]Ying J(英加), Li B(李滨), Mu S-M(穆素梅), Zhou H-P(周汉平), Liu J-Z(刘建中), Li Z-S(李振声). Identification of blue-grained wheat translocation lines using fluorescence in situ hybridization. Acta Bot Sin (植物学报), 2001, 43(2): 164-168 (in Chinese with English abstract)
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