作物学报 ›› 2022, Vol. 48 ›› Issue (1): 48-62.doi: 10.3724/SP.J.1006.2022.11006
所属专题: 小麦:遗传育种·种质资源·分子遗传学
李玲红(
), 张哲, 陈永明, 尤明山, 倪中福, 邢界文*(
)
LI Ling-Hong(
), ZHANG Zhe, CHEN Yong-Ming, YOU Ming-Shan, NI Zhong-Fu, XING Jie-Wen*(
)
摘要:
为了明确突变体颖壳蜡质含量显著变化的分子机制, 本研究对源自济麦22颖壳蜡质缺失突变体glossy1与野生型进行了转录组分析。结果表明, 在glossy1突变体中, 共筛选到12,230个差异表达基因, 其中5811个基因在突变体中上调表达, 6419个下调表达。GO (gene ontology)功能富集分析发现, 差异基因主要富集在蜡质合成和转运途径, 具体分布在酰基转移酶活性、脂质结合和水解酶活性等条目, 由此推测这些途径与小麦穗部蜡质缺失性状是紧密相关的。我们还利用RT-qPCR检测了参与蜡质代谢途径部分基因的表达, 结果与转录组结果是一致的。本研究为今后探究小麦蜡质代谢的分子机制和基因调控网络提供了数据支持, 同时也为抗逆小麦育种奠定了理论基础。
| [1] | Sturaro M, Motto M, Hemantaranjan A. Plant cuticular waxes: biosynthesis and functions. Adv Plant Physiol, 2006, 9:229-251. |
| [2] | Yeats T H, Rose J K C. The formation and function of plant cuticles. Plant Physiol, 2013, 163:5-20. |
| [3] | Dehesh K, Tai H, Edwards P, Byrne J, Jaworski J G. Overexpression of 3-ketoacyl-acyl-carrier protein synthase IIIs in plants reduces the rate of lipid synthesis. Plant Physiol, 2001, 125:1103-1114. |
| [4] | Leibundgut M, Jenni S, Frick C, Ban N. Structural basis for substrate delivery by acyl carrier protein in the yeast fatty acid synthase. Science, 2007, 316:288-290. |
| [5] | LiBeisson Y, Shorrosh B, Beisson F, Andersson M X, Arondel V, Bates P D, Baud S, Bird D, DeBono A, Durrett T P. Acyl-lipid metabolism. Arabidopsis Book, 2010, 8:e0133. |
| [6] | Bernard A, Domergue F, Pascal S, Jetter R, Renne C, Faure J D, Haslam R P, Napier J A, Lessire R, Joubès J. Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. Plant Cell, 2012, 24:3106-3118. |
| [7] | Owen R, Huanquan Z, Hepworth S R, Patricia L, Reinhard J, Ljerka K. CER4 encodes an alcohol-forming fatty acyl-coenzyme A reductase involved in cuticular wax production in Arabidopsis. Plant Physiol, 2006, 142:866-877. |
| [8] | Wang M, Wang Y, Wu H, Xu J, Li T, Hegebarth D, Jetter R, Chen L, Wang Z. Three TaFAR genes function in the biosynthesis of primary alcohols and the response to abiotic stresses in Triticum aestivum. Sci Rep, 2016, 6:25008. |
| [9] | Tulloch A P. Composition of leaf surface waxes of Triticum species: variation with age and tissue. Phytochemistry, 1973, 12:2225-2232. |
| [10] | Wettstein-Knowles P V, Søgaard B. The cer-cqu region in barley: gene cluster or multifunctional gene. Carlsberg Res Commun, 1980, 45:125-141. |
| [11] | Zhang Z, Wang W, Li W. Genetic interactions underlying the biosynthesis and inhibition of beta-diketones in wheat and their impact on glaucousness and cuticle permeability. PLoS One, 2013, 8:e54129. |
| [12] | Hen-Avivi S, Savin O, Racovita R C, Lee W S, Adamski N M, Malitsky S, Almekias-Siegl E, Levy M, Vautrin S, Berges H, Friedlander G, Kartvelishvily E, Ben-Zvi G, Alkan N, Uauy C, Kanyuka K, Jetter R, Distelfeld A, Aharoni A. A metabolic gene cluster in the wheat W1 and the barley Cer-cquloci determines beta-diketone biosynthesis and glaucousness. Plant Cell, 2016, 28:1440-1460. |
| [13] | Pighin J A, Huanquan Z, Balakshin L J, Goodman I P, Western T L, Reinhard J, Ljerka K, A Lacey S. Plant cuticular lipid export requires an ABC transporter. Science, 2004, 306:702-704. |
| [14] | Debono A, Yeats T H, Rose J K C, Bird D, Jetter R, Kunst L, Samuels L. ArabidopsisLTPG is a glycosylphosphatidylinositol-anchored lipid transfer protein required for export of lipids to the plant surface. Plant Cell, 2009, 21:1230-1238. |
| [15] | Li L, Chai L, Xu H, Zhai H, Wang T, Zhang M, You M, Peng H, Yao Y, Hu Z, Xin M, Guo W, Sun Q, Chen X, Ni Z. Phenotypic characterization of the glossy1 mutant and fine mapping of GLOSSY1 in common wheat(Triticum aestivum L.). Theor Appl Genet, 2021, 134:835-847. |
| [16] | Marioni J C, Mason C E, Mane S M, Stephens M, Gilad Y. RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. Genome Res, 2008, 18:1509-1517. |
| [17] | Love M I, Huber W, Anders S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol, 2014, 15:550. |
| [18] | Livak K J, Schmittgen T D. Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method. Methods, 2001, 25:402-408. |
| [19] | Young M D, Wakefield M J, Smyth G K, Oshlack A. Gene ontology analysis for RNA-seq: accounting for selection bias. Genome Biol, 2010, 11:R14. |
| [20] | Chen Y, Song W, Xie X, Wang Z, Guan P, Peng H, Jiao Y, Ni Z, Sun Q, Guo W. A collinearity-incorporating homology inference strategy for connecting emerging assemblies in triticeae tribe as a pilot practice in the plant pangenomic era. Mol Plant, 2020, 13:1694-1708. |
| [21] | Huang D, Feurtado J A, Smith M A, Flatman L K, Koh C, Cutler A J. Long noncoding miRNA gene represses wheat beta- diketone waxes. Proc Natl Acad Sci USA, 2017, 114:E3149-E3158. |
| [22] | Liu Y, Wang H, Jiang Z, Wang W, Xu R, Wang Q, Zhang Z, Li A, Liang Y, Ou S, Liu X, Cao S, Tong H, Wang Y, Zhou F, Liao H, Hu B, Chu C. Genomic basis of geographical adaptation to soil nitrogen in rice. Nature, 2021, 590:600-605. |
| [23] | Li L, Qi Z, Chai L, Chen Z, Wang T, Zhang M, You M, Peng H, Yao Y, Hu Z, Xin M, Guo W, Sun Q, Ni Z. The semidominant mutation w5 impairs epicuticular wax deposition in common wheat(Triticum aestivum L.). Theor Appl Genet, 2020, 133:1213-1225. |
| [24] | Adamski N M, Bush M S, Simmonds J, Turner A S, Mugford S G, Jones A, Findlay K, Pedentchouk N, von Wettstein-Knowles P, Uauy C. The inhibitor of wax 1 locus(Iw1) prevents formation of beta- and OH-beta-diketones in wheat cuticular waxes and maps to a sub-cM interval on chromosome arm 2BS. Plant J, 2013, 74:989-1002. |
| [25] | Bianchi G, Figini M L. Epicuticular waxes of glaucous and nonglaucous durum wheat lines. J Agric Food Chem, 1986, 34:429-433. |
| [26] | Chen G, Komatsuda T, Ma J F, Nawrath C, Pourkheirandish M, Tagiri A, Hu Y G, Sameri M, Li X, Zhao X, Liu Y, Li C, Ma X, Wang A, Nair S, Wang N, Miyao A, Sakuma S, Yamaji N, Zheng X, Nevo E. An ATP-binding cassette subfamily G full transporter is essential for the retention of leaf water in both wild barley and rice. Proc Natl Acad Sci USA, 2011, 108:12354-12359. |
| [27] | Cameron K D, Teece M A, Smart L B. Increased accumulation of cuticular wax and expression of lipid transfer protein in response to periodic drying events in leaves of tree tobacco. Plant Physiol, 2006, 140:176-183. |
| [1] | 翟胜男, 曹新有, 李豪圣, 李吉虎, 李法计, 刘金栋, 夏先春, 吕莹莹, 马瑞峰, 王颖, 耿洪伟, 刘建军. 小麦Pod-A1、Pod-D1和Pod-2D位点等位变异对籽粒过氧化物酶活性的遗传效应分析[J]. 作物学报, 2026, 52(6): 1593-1603. |
| [2] | 习千辉, 徐梓瑗, 刘梦梦, 王宏艺, 郎凯琳, 井震海, 陈锋, 赵磊. 小麦籽粒铜含量的全基因组关联分析及候选基因预测[J]. 作物学报, 2026, 52(6): 1604-1617. |
| [3] | 毛嘉琦, 黄朋雨, 赵佳佳, 郑兴卫, 武棒棒, 郝宇琼, 屈非, 刘成, 马朋涛, 郑军. 山西小麦品种白粉病抗性评价及抗病基因分子检测[J]. 作物学报, 2026, 52(6): 1669-1681. |
| [4] | 胡川, 赵凯男, 黄修利, 吴金芝, 任开明, 王贺正, 付国占, 黄明, 李友军. 一次灌溉下耕作方式和氮肥用量对旱地小麦产量和品质的影响[J]. 作物学报, 2026, 52(6): 1830-1846. |
| [5] | 陈雪燕, 何华川, 李政嘉, 董新盼, 李藕琪, 刘小云, 李丹萍, 陈志伟, 刘国霞, 吕胜源, 吴印莹, 赵振东, 曹新有, 万何平. 水培盐碱复合胁迫下‘济麦60’苗期根系有机酸分泌动态变化及其转录调控机制[J]. 作物学报, 2026, 52(6): 1859-1875. |
| [6] | 高沛阳, 李瑾璇, 董宇奎, 石玉, 张振, 张永丽. 测墒补灌下小麦分蘖发生和成穗对施氮量的响应[J]. 作物学报, 2026, 52(6): 1847-1858. |
| [7] | 张献丰, 郭利建, 李康春, 孔斌雪, 刘玉芳, 车卓, 杨德龙. 小麦ABHD6基因家族鉴定与粒重功能标记开发[J]. 作物学报, 2026, 52(6): 1711-1727. |
| [8] | 王壮壮, 武紫君, 张永新, 张芯源, 袁丽雪, 陈如雪, 刘世举, 段剑钊, 冯伟, 王同朝, 王永华. 豫东南黏壤潮土区水氮优化协同提高冬小麦产量和氮素利用效率[J]. 作物学报, 2026, 52(5): 1501-1521. |
| [9] | 韩亚鑫, 何冠华, 张小琼, 张登峰, 李永祥, 刘旭洋, 王天宇, 黎裕, 邹华文, 李春辉. 基于RNA-Seq和BSA-Seq联合分析挖掘玉米侧根密度基因资源[J]. 作物学报, 2026, 52(5): 1341-1352. |
| [10] | 张振, 冯连杰, 石玉, 于振文, 张永丽. 节水补灌下不同穗型小麦产量形成差异研究[J]. 作物学报, 2026, 52(5): 1522-1535. |
| [11] | 何万龙, 耿洪伟, 张飞飞, 米克热阿依·阿巴白克热, 罗紫洋, 李鹏程, 周钊宇, 程宇坤. 基于深度学习的小麦重要病害图像识别系统的研究[J]. 作物学报, 2026, 52(5): 1401-1417. |
| [12] | 杨亚莉, 徐明睿, 马越飞, 海艺蕊, 刘凯栋, 刘万茂, 孙颖. 玉米根尖及整根响应缺铁的转录组比较研究[J]. 作物学报, 2026, 52(4): 1006-1021. |
| [13] | 侯思宇, 王国璀, 韦金贵, 谢玮欣, 殷文, 樊志龙, 柴强, 胡发龙. 绿肥配施化学氮肥对西北干旱灌区小麦干物质积累及产量形成的影响[J]. 作物学报, 2026, 52(4): 1208-1219. |
| [14] | 尚云秋, 赵竹, 陈欢, 丁永刚, 乔玉强, 李玮, 张向前, 曹承富, 杜世州. 长期定位耕作方式对雨养小麦籽粒灌浆和产量形成的影响[J]. 作物学报, 2026, 52(4): 1236-1250. |
| [15] | 杨影, 郝豫皖, 张学宁, 方佳璐, 马月华, 杨伟龙, 孙文清, 王新超, 王玉春, 黄建燕. 乙烯响应因子CsERF9调控茶树炭疽病抗性的分子机制研究[J]. 作物学报, 2026, 52(4): 1103-1115. |
|
||