Acta Agronomica Sinica ›› 2022, Vol. 48 ›› Issue (8): 1914-1925.doi: 10.3724/SP.J.1006.2022.14167
• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles Next Articles
WANG Rong1,2(), CHEN Xiao-Hong1,2, WANG Qian1,2, LIU Shao-Xiong2, LU Ping2, DIAO Xian-Min2,*(), LIU Min-Xuan2,*(), WANG Rui-Yun1,3,*()
[1] | Wang C F, Jia G Q, Zhi H, Niu Z G, Chai Y, Li W, Wang Y F, Li H Q, Lu P, Zhao B H, Diao X M. Genetic diversity and population structure of Chinese foxtail millet [Setaria italica (L.) Beauv.] landraces. Genes Genom Genet, 2012, 2: 769-777. |
[2] |
Liu Z L, Bai G H, Zhang D D, Zhu C S, Xia X Y, Cheng R H, Shi Z G. Genetic diversity and population structure of elite foxtail millet [Setaria italica (L.) P. Beauv.] germplasm in China. Crop Sci, 2011, 51: 1655-1663.
doi: 10.2135/cropsci2010.11.0643 |
[3] | 刁现民. 禾谷类杂粮作物耐逆和栽培技术研究新进展. 中国农业科学, 2019, 52: 3943-3949. |
Diao X M. Progresses in stress tolerance and field cultivation studies of orphan cereals in China. Sci Agric Sin, 2019, 52: 3943-3949. (in Chinese with English abstract) | |
[4] | Gopi T, Jawahar S, Shankergoud I, Yoogesh L N, Patil A, Tembhurne B V, Gowda B, Kengnal M. Genetic diversity in foxtail millet genotypes. Electron J Plant Breed, 2021, 12: 159-162. |
[5] | 丁银灯, 胡相伟, 聂石辉, 王仙, 冯国郡, 耿洪伟, 郭丁. 谷子种质资源表型及SSR遗传多样性分析. 植物遗传资源学报, 2018, 19: 1210-1221. |
Ding Y D, Hu X W, Nie S H, Wang X, Feng G J, Geng H W, Guo D. Analysis of phenotypic traits and SSR genetic diversity of foxtail millet germplasms. J Plant Genet Resour, 2018, 19: 1210-1221. (in Chinese with English abstract) | |
[6] | 刘建垒, 常柳, 段晓亮, 王文娟, 孙辉. 谷子的生产概况及其保健功能与机理研究进展. 食品工业科技, 2021, 43(5): 389-395. |
Liu J L, Chang L, Duan X L, Wang W J, Sun H. Foxtail millet: production status, advances on health benefits and its mechanism. Sci Technol Food Ind, 2021, 43(5): 389-395. | |
[7] | 田伯红. 谷子地方品种和育成品种的遗传多样性研究. 植物遗传资源学报, 2010, 11: 224-228. |
Tian B H. Genetic diversity of landrace and improved cultivars in foxtail millet. J Plant Genet Resour, 2010, 11: 224-228. (in Chinese with English abstract) | |
[8] | Diao X M, Schnable J, Bennetzen J L, Li J Y. Initiation of Setaria as a model plant. Front Agric Sci Eng, 2014, 1: 16-20. |
[9] | 贾冠清, 刁现民. 谷子(Setaria italica (L.) P. Beauv.) 作为功能基因组研究模式植物的发展现状及趋势. 生命科学, 2017, 29: 292-301. |
Jia G Q, Diao X M. Current status and perspectives of researches on foxtail millet (Setaria italica (L.) P. Beauv): a potential model of plant functional genomics studies. Chin Bull Life Sci, 2017, 29: 292-301. (in Chinese with English abstract) | |
[10] |
Heubl G. New aspects of DNA-based authentication of Chinese medicinal plants by molecular biological techniques. Planta Med, 2010, 76: 1963-1974.
doi: 10.1055/s-0030-1250519 |
[11] |
Gupta S, Kumari K, Muthamilarasan M, Parida S K, Prasad M. Population structure and association mapping of yield contributing agronomic traits in foxtail millet. Plant Cell Rep, 2014, 33: 881-893.
doi: 10.1007/s00299-014-1564-0 |
[12] | 王海岗, 温琪汾, 穆志新, 乔治军. 山西谷子核心资源群体结构及主要农艺性状关联分析. 中国农业科学, 2019, 52: 4088-4099. |
Wang H G, Wen Q F, Mu Z X, Qiao Z J. Population structure and association analysis of main agronomic traits of Shanxi core collection in foxtail millet. Sci Agric Sin, 2019, 52: 4088-4099. (in Chinese with English abstract) | |
[13] | 王姗姗, 张宁, 王凯玺, 阮亚男, 王红艳. 中国辽西地区谷子品种遗传多样性的SSR分析. 分子植物育种, 2015, 13: 1091-1097. |
Wang S S, Zhang N, Wang K X, Ruan Y N, Wang H Y. Genetic diversity of foxtail millet cultivars in western Liaoning province revealed by SSR markers. Mol Plant Breed, 2015, 13: 1091-1097. (in Chinese with English abstract) | |
[14] |
Jingade P, Jingade P, Sannasi S, Jha C S, Mishra M K. Molecular characterization of Trichoderma species using SRAP markers. Arch Phytopathol Plant Prot, 2018, 51: 128-138.
doi: 10.1080/03235408.2018.1439871 |
[15] |
Li G, Quiros C F. Sequence-related amplified polymorphism (SRAP), a new marker system based on a simple PCR reaction: its application to mapping and gene tagging in Brassica. Theor Appl Genet, 2001, 103: 455-461.
doi: 10.1007/s001220100570 |
[16] | 郭利建, 王竹林, 汪世娟, 刘香利, 赵惠贤. 基于SRAP和SSR标记的小麦粒长和千粒质量QTL定位及效应分析. 西北农业学报, 2017, 26: 1165-1172. |
Guo L J, Wang Z L, Wang S J, Liu X L, Zhao H X. Analysis of wheat kernel length and 1000-grain mass based on SRAP and SSR markers. Acta Agric Boreali-Occident Sin, 2017, 26: 1165-1172. (in Chinese with English abstract) | |
[17] | 张春宝, 邱红梅, 赵洪锟, 彭宝, 赵丽梅, 董英山. 东北地区大豆种质遗传多样性的SRAP标记分析. 大豆科学, 2014, 33: 17-22. |
Zhang C B, Qiu H M, Zhao H K, Peng B, Zhao L M, Dong Y S. Genetic diversity analysis of soybean germplasm in northeast region of China by SRAP markers. Soybean Sci, 2014, 33: 17-22. (in Chinese with English abstract) | |
[18] | 林增顺, 刘冠明, 徐庆国. 利用SRAP标记分析水稻新品系遗传多样性. 基因组学与应用生物学, 2019, 38: 1683-1688. |
Lin Z S, Liu G M, Xu Q G. Analysis of genetic diversity of new rice lines by SRAP markers. Genomics Appl Biol, 2019, 38: 1683-1688. (in Chinese with English abstract) | |
[19] | 石玲艳, 侯建华, 张永虎, 吕品, 王婷婷, 杨旭东. 基于SRAP标记的玉米自交系遗传多样性与群体结构分析. 作物杂志, 2015, (3): 57-63. |
Shi L Y, Hou J H, Zhang Y H, Lyu P, Wang T T, Yang X D. Genetic diversity and population structure of maize inbred lines by SRAP markers. Crops, 2015, (3): 57-63. (in Chinese with English abstract) | |
[20] | 王桂峰, 魏学文, 王琰, 宋焕. 利用SRAP检验棉花种子纯度. 棉花科学, 2018, 40(4): 2-6. |
Wang G F, Wei X W, Wang Y, Song H. The purity of cotton seeds was tested by SRAP. Cotton Sci, 2018, 40(4): 2-6. (in Chinese) | |
[21] | 肖宇, 魏国江, 孙力, 王晓飞, 刘淑霞, 徐海军, 关向军. 基于SRAP分子标记的黑龙江紫苏种质资源遗传多样性分析. 分子植物育种, 1-72021[2021-12-27]. http://kns.cnki.net/kcms/detail/46.1068.s.20210416.0955.002.html. |
Xiao Y, Wei G J, Sun L, Wang X F, Liu S X, Xu H J, Guan X J. Genetic diversity analysis of perilla futescens grmplasm in Heilongjiang province based on SRAP. Mol Plant Breed, 1-7. 2021[2021-12-27]. http://kns.cnki.net/kcms/detail/46.1068.s.20210416.0955.002.html. (in Chinese with English abstract) | |
[22] | 尹伟丹, 马玉申, 揭红东, 张英, 曾怡, 彭文仙, 汪娅梅, 邢虎成, 揭雨成. 薏苡农艺性状等性状与SRAP标记的关联分析. 分子植物育种: 1-21. 2021 [2021-12-27]. http://kns.cnki.net/kcms/detail/46.1068.S.20210309.1805.018.html. |
Yin W D, MaY S, Jie H D, Zhang Y, Zeng Y, Peng W X, Wang Y M, Xing H C, Jie Y C. Association analysis of agronomic traits with SRAP markers in Coix. Mol Plant Breed, 1-21. 2021 [2021-12-27]. http://kns.cnki.net/kcms/detail/46.1068.S.20210309.1805.018.html. (in Chinese with English abstract) | |
[23] |
Zhang G Y, Liu X, Quan Z W, Cheng S F, Xu X, Pan S K, Xie M, Zeng P, Yue Z, Wang W L, Tao Y, Bian C, Han C L, Xia Q J, Peng X H, Cao R, Yang X H, Zhan D L, Hu J C, Zhang Y X, Li H N, Li H, Li N, Wang J Y, Wang C C, Wang R Y, Guo T, Cai Y J, Liu C Z, Xiang H T, Shi Q X, Huang P, Chen Q C, Li Y R, Wang J, Zhao Z H, Wang J. Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential. Nat Biotechnol, 2012, 30: 549-554.
doi: 10.1038/nbt.2195 |
[24] |
Garima P, Gopal M, Kajal K, Sarika G, Swarup K P, Debasis C, Manoj P. Genome-wide development and use of microsatellite markers for large-scale genotyping applications in foxtail millet [Setaria italica (L.)]. DNA Res, 2013, 20: 197-207.
doi: 10.1093/dnares/dst002 pmid: 23382459 |
[25] |
Bennetzen J L, Schmutz J, Wang H, Percifield R, Hawkins J, Pontaroli A C, Estep M, Feng L, Vaughn J N, Grimwood J, Jenkins J, Barry K, Lindquist E, Hellsten U, Deshpande S, Wang X W, Wu X M, Mitros T, Triplett J, Yang X H, Ye C Y, Mauro-Herrera M, Wang L, Li P H, Sharma M, Sharma R, Ronald P C, Panaud O, Kellogg E A, Brutnell T P, Doust A N, Tuskan G A, Rokhsar D, Devos K M. Reference genome sequence of the model plant Setaria. Nat Biotechnol, 2012, 30: 555-561.
doi: 10.1038/nbt.2196 pmid: 22580951 |
[26] | 赵晓燕, 张彬, 李倩, 沙淑莉, 李丹丹, 周冠霖, 肖霄, 于宏伟. 优质小米结构研究及鉴别. 特产研究, 2021, 43(1): 33-38. |
Zhao X Y, Zhang B, Li Q, Sha S L, Li D D, Zhou G L, Xiao X, Yu H W. Structure study and identification of quality millet. Special Wild Econ Animal Plant Res, 2021, 43(1): 33-38. (in Chinese with English abstract) | |
[27] | 岳树明. 沁州小米甲天下. 食品与生活, 1994, (6): 39. |
Yue S M. Foxtail millet in Qinzhou is the best. Food Life, 1994, (6): 39. (in Chinese) | |
[28] | 郭连伟. 蔚县桃花米悠悠千载美名扬. 河北农业, 2021, (10): 32. |
Guo L W. Foxtail millet of Taohuami in Yuxian has a long thousands of years of notability. Hebei Agric, 2021, (10): 32. (in Chinese) | |
[29] | 李海权, 智慧, 王永芳, 李伟, 刘小静, 刁现民. SRAP标记技术在谷子及其近缘野生种青狗尾草的应用分析. 河北农业科学, 2010, 14(11): 68-72. |
Li H Q, Zhi H, Wang Y F, Li W, Liu X J, Diao X M. Application of SRAP technology on foxtail millet and its wild relative green foxtail. J Hebei Agric Sci, 2010, 14(11): 68-72. (in Chinese with English abstract) | |
[30] | 刘倩, 戴志刚, 陈基权, 温岚, 龚友才, 粟建光. 应用SRAP分子标记构建红麻种质资源分子身份证. 中国农业科学, 2013, 46: 1974-1983. |
Liu Q, Dai Z G, Chen J Q, Wen L, Gong Y C, Su J G. Establishment of molecular identity for kenaf germplasm using SRAP marker. Sci Agric Sin, 2013, 46: 1974-1983. (in Chinese with English abstract) | |
[31] | 祁旭升, 王晓娟. 甘肃省同名不同来源地方小麦品种的形态学鉴定. 作物杂志, 2008, (3): 24-28. |
Qi X S, Wang X J. Identification of morphological characters of wheat landraces with the same name but different geographical origin in Gansu. Crops, 2008, (3): 24-28. (in Chinese with English abstract) | |
[32] | 肖军治. 湖南同名异种地方稻资源核心种质遴选. 中南大学硕士学位论文,湖南长沙, 2011. |
Xiao J Z. Core Collection of Heterogeneous with Same Name of Local Rice in Hunan Province. MS Thesis of Central South University, Changsha, Hunan, China, 2011. (in Chinese with English abstract) | |
[33] | 闫哲, 常汝镇, 关荣霞, 刘章雄, 邱丽娟. 不同来源大豆同名品种“满仓金”表现型及SSR标记的异同性分析. 植物遗传资源学报, 2003, 4: 128-133. |
Yan Z, Chang R Z, Guan R X, Liu Z X, Qiu L J. Analysis of similarity and difference of soybean varieties mancangjins from various regions by using agronomic traits and SSR markers. J Plant Genet Resour, 2003, 4: 128-133. (in Chinese with English abstract) | |
[34] | 李正玲, 胡琳, 王会伟, 董海滨, 李艳, 李春鑫, 许为钢. 河南省同名小麦地方品种SSR遗传多样性分析. 麦类作物学报, 2016, 36: 564-570. |
Li Z L, Hu L, Wang H W, Dong H B, Li Y, Li C X, Xu W G. Genetic diversity of Henan wheat landraces with the same name detected by SSR markers. J Triticeae Crops, 2016, 36: 564-570. (in Chinese with English abstract) | |
[35] | 于萍, 李丽, 侯丽媛, 徐群, 王一平, 余汉勇, 魏兴华, 袁筱萍. 太湖粳稻同名地方品种的遗传差异. 植物遗传资源学报, 2010, 11: 535-539. |
Yu P, Li L, Hou L Y, Xu Q, Wang Y P, Yu H Y, Wei X H, Yuan X P. Genetic variation within landraces with the same name of japonica rice in the Taihu lake region. J Plant Genet Resour, 2010, 11: 535-539. (in Chinese with English abstract) | |
[36] | 盖树鹏, 盖伟玲, 黄进勇. SSR与SRAP标记在玉米品种鉴定中的比较研究. 植物遗传资源学报, 2011, 12: 468-472. |
Ge S P, Ge W L, Huang J Y. Comparison of SSR and SRAP marker for varieties identification in maize (Zea mays L.). J Plant Genet Resour, 2011, 12: 468-472. (in Chinese with English abstract) |
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