作物学报 ›› 2015, Vol. 41 ›› Issue (11): 1657-1662.doi: 10.3724/SP.J.1006.2015.01657
林静1,2,杨永庆2,3,侯文焕2,杨春燕2,谢令琴1,*,智海剑3,张孟臣2,*
LIN Jing1,2,YANG Yong-Qing2,3,HOU Wen-Huan2,YANG Chun-Yan2,XIE Ling-Qin1,*,ZHI Hai-Jian3,ZHANG Meng-Chen2,*
摘要:
重组型大豆花叶病毒(soybean mosaic virus, SMV-R)是一种新SMV类型,在我国多个大豆产区广泛流行。本研究对一个重组型SMV河北分离物(HB-RS)进行全基因组测序,比较与非重组型SMV在侵染4个大豆品种后病毒浓度积累的差异。结果显示,除poly-A尾巴外,HB-RS (NCBI登录号为KR065437)由9993个核苷酸组成,包含一个开放阅读框(open reading frame, ORF),翻译后形成3202个氨基酸,系统进化分析结果显示HB-RS分离物与另外两个重组型SMV分离物聚在一组。抗性鉴定结果显示,4个品种对HB-RS和Sc6平均病情指数分别为59.5和60.5,相同大豆品种对不同的株系(分离物)可能呈现不同的症状和抗性表现,其中冀豆17对Sc6和HB-RS分别表现高抗和中抗,表明大豆对SMV的抗性存在一定的株系(分离物)专化性。此外,HB-RS在4个品种中的浓度积累均高于Sc6,在南农1138-2病毒浓度最高,达522 U,其次为五星1号(471 U)和冀黄13 (199 U),最低为冀豆17,仅90 U。说明HB-RS在寄主体内更具有生存适应性,不同品种对SMV存在抗性差异。冀豆17可作为抗性品种和亲本进一步推广。
| [1]ShuklaD D, Ward C W, Brunt A A. Genome structure,variation and function. Potyviridae Wallingford England: CAB International, 1994, 74–110[2]Bos L. Potyvirus, chaos or order? In potyvirus taxonomy. Arch Virol, 1992, 5(suppl): 31–46[3]Riechmann J L, Lain S, Garcia J A. Highlights and prospects of potyvirus molecular biology. J Gen Virol, 1992, 73: 1–16[4]Valli A, Lopez-Moya J J, Garcia J A. Recombination and gene duplication in the evolutionary diversification of P1 proteins in the family Potyviridae. J Gen Virol, 2007, 88: 1016–1028[5]Nie X Z, Singh R P. Probable geographical grouping of PVYN and PVYNTN based on sequence variation in P1 and 5'-UTR of PVY genome and methods for differentiating North American PVYNTN. J Virol Methods, 2002, 103: 145–156[6]Chen J, Zheng H Y, Lin L, Adams M J, Antoniw J F, Zhao M F, Shang Y F, Chen J P. A virus related to soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates. Arch Virol, 2004, 149: 349–363[7]Ali A, Natsuaki T, Okuda S. The complete nucleotide sequence of a Pakistani isolate of Watermelon mosaic virus provides further insights into the taxonomic status in the Bean common mosaic virus subgroup. Virus Genes, 2006, 32: 307–311[8]Seo J K, Ohshima K, Lee H G, Son M, Choi H S, Lee S H, Sohn S H, Kim K H. Molecular variability and genetic structure of the population of soybean mosaic virus based on the analysis of complete genome sequences. Virology, 2009, 393: 91–103[9]Ogawa T, Tomitaka Y, Nakagawa A, Ohshima K. Genetic structure of a population of Potato virus Y inducing potato tuber necrotic ringspot disease in Japan; comparison with North American and European populations. Virus research, 2008, 131:199–212[10]Larsen R C, Miklas P N, Druffel K L, Wyatt S D. NL-3 K Strain is a stable and naturally occurring interspecific recombinant derived from Bean common mosaic necrosis virus and Bean common mosaic virus. Phytopathology, 2005, 95: 1037–1042[11]Tan Z Y, Wada Y, Chen J S, Ohshima K. Inter- and intralineage recombinants are common in natural populations of Turnip mosaic virus. J Genl Virol, 2004, 85: 2683–2696[12]Desbiez C, Lecoq H. The nucleotide sequence of Watermelon mosaic virus (WMV, Potyvirus) reveals interspecific recombination between two related potyviruses in the 5' part of the genome. Arch Virol, 2004, 149: 1619–1632[13]Yang Y Q, Gong J W, Li H W, Li C Y, Wang D G, Li K, Zhi H J. Identification of a novel Soybean mosaic virus isolate in China that contains a unique 5 ' terminus sharing high sequence homology with Bean common mosaic virus. Virus Res, 2011,157: 13–18[14]Yang Y Q, Lin J, Zheng G J, Zhang M C, Zhi H J. Recombinant soybean mosaic virus is prevalent in Chinese soybean fields. Arch Virol, 2014, 159: 1793–1796[15]Woffelman C. DNAMAN for Windows, Version 5.2. 10. Lynon Biosoft, Institute of Molecular Plant Sciences, Netherlands: Leiden University, 2004[16]Felsenstein J. Mathematics vs. evolution: mathematical evolutionary theory. Science, 1989, 246: 941–942[17]Huson D H, Bryant D. Application of phylogenetic networks in evolutionary studies. Mol Biol Evol, 2006, 23: 254–267[18]Pasin F, Simon-Mateo C, Garcia J A. The hypervariable amino-terminus of P1 protease modulates potyviral replication and host defense responses. PloS Pathogens, 2014, 10: e1003985[19]Zhi H J, Gai J Y. Performances and germplasm evaluation of quantitative resistance to soybean mosaic virus in soybeans. J Integr Agric, 2004, 3: 247–25 |
| [1] | 习千辉, 徐梓瑗, 刘梦梦, 王宏艺, 郎凯琳, 井震海, 陈锋, 赵磊. 小麦籽粒铜含量的全基因组关联分析及候选基因预测[J]. 作物学报, 2026, 52(6): 1604-1617. |
| [2] | 毛嘉琦, 黄朋雨, 赵佳佳, 郑兴卫, 武棒棒, 郝宇琼, 屈非, 刘成, 马朋涛, 郑军. 山西小麦品种白粉病抗性评价及抗病基因分子检测[J]. 作物学报, 2026, 52(6): 1669-1681. |
| [3] | 唐宽强, 李公允, 宋美毅, 赵雪, 常春玲. 大豆株高性状全基因组关联分析及预测模型构建[J]. 作物学报, 2026, 52(6): 1743-1756. |
| [4] | 杨欣雨, 崔文涛, 迪力尼格尔·阿力木, 汪凯翔, 吴鹏昊, 任姣姣. 玉米穗上叶片数全基因组关联分析和全基因组选择[J]. 作物学报, 2026, 52(5): 1573-1590. |
| [5] | 谷春苗, 王润风, 黄璐, 刘浩, 鲁清, 李海芬, 李少雄, 何双呈, 洪彦彬, 陈小平, 谭斌, 余倩霞. 花生WOX基因家族的全基因组分析及不定芽再生候选基因的鉴定[J]. 作物学报, 2026, 52(5): 1326-1340. |
| [6] | 闫安, 蒋昆炜, 王蓉圆, 田林, 张璐, 王韵, 徐建龙. 水稻剑叶小维管束数基因SVN7的鉴定与克隆[J]. 作物学报, 2026, 52(5): 1364-1372. |
| [7] | 田立涛, 丁宁, 王树林, 齐恩芳, 张荣, 王蕊蕊, 马利雯, 李建武, 杨江伟. 马铃薯Argonaute基因家族鉴定及晚疫病诱导表达分析[J]. 作物学报, 2026, 52(4): 1116-1126. |
| [8] | 鲁雅妮, 丁超杰, 张煜, 杜习军, 齐学礼, 胡琳, 许为钢. 河南省200份小麦品种苗期茎基腐病抗性鉴定与全基因组关联分析[J]. 作物学报, 2026, 52(2): 363-375. |
| [9] | 李诗晴, 王茜, 王素华, 张耀文, 王丽侠. 绿豆种质资源苗期耐盐性鉴定及相关基因发掘[J]. 作物学报, 2026, 52(2): 376-388. |
| [10] | 姬炫彤, 卞春松, 金黎平, 李森, 秦军红, 李广存. 不同耐旱型马铃薯根际微生物对干旱的响应[J]. 作物学报, 2026, 52(1): 165-177. |
| [11] | 李璐琪, 程宇坤, 白斌, 雷斌, 耿洪伟. 小麦叶片气孔相关性状全基因组关联分析[J]. 作物学报, 2025, 51(9): 2266-2284. |
| [12] | 李云香, 郭千纤, 侯万伟, 张小娟. 引进ICARDA小麦苗期根系抗旱性状的全基因组关联分析[J]. 作物学报, 2025, 51(9): 2387-2398. |
| [13] | 蔡金珊, 李超男, 王景一, 李宁, 柳玉平, 景蕊莲, 李龙, 孙黛珍. 小麦幼苗根系性状全基因组关联分析及TaSRL-3B优异等位基因发掘[J]. 作物学报, 2025, 51(8): 2020-2032. |
| [14] | 李宜谦, 徐守振, 刘萍, 马麒, 谢斌, 陈红. 基于40K SNP芯片的陆地棉产量构成因素全基因组关联分析及单铃重位点挖掘[J]. 作物学报, 2025, 51(8): 2128-2138. |
| [15] | 高梦娟, 赵贺莹, 陈家辉, 陈晓倩, 牛萌康, 钱琪润, 崔陆飞, 邢江敏, 银庆淼, 郭雯, 张宁, 孙丛苇, 阳霞, 裴丹, 贾奥琳, 陈锋, 余晓东, 任妍. 小麦抗纹枯病新位点Qse.hnau-5AS的定位及其候选基因鉴定[J]. 作物学报, 2025, 51(8): 2240-2250. |
|
||