欢迎访问作物学报,今天是

作物学报 ›› 2015, Vol. 41 ›› Issue (03): 349-358.doi: 10.3724/SP.J.1006.2015.00349

• 作物遗传育种·种质资源·分子遗传学 •    下一篇

燕大1817/北农6号重组自交系群体穗部性状的QTL定位

吴秋红1,**,陈娇娇1,**,陈永兴1,周升辉1,傅琳1,张德云1,肖尧1,王国鑫1,王振忠1,王立新2,韩俊3,袁成国4,尤明山1,刘志勇1,*   

  1. 1中国农业大学植物遗传育种系,北京100193;2北京市农林科学院,北京100197;3北京农学院,北京102206;4河北省高邑县原种场,河北高邑051330
  • 收稿日期:2014-09-09 修回日期:2014-12-19 出版日期:2015-03-12 网络出版日期:2014-12-19
  • 通讯作者: 刘志勇, E-mail: zhiyongliu@cau.edu.cn
  • 基金资助:

    本研究由国家自然科学基金项目(31271710, 31301312)和国家重点基础研究计划(973计划)项目(2011CB100104)资助。

Mapping Quantitative Trait Loci Related to Spike Traits Using a RILs Population of Yanda 1817 × Beinong 6 in Wheat (Triticum aestivum L.)

WU Qiu-Hong1,**,CHEN Jiao-Jiao1,**,CHEN Yong-Xing1,ZHOU Sheng-Hui1,FU Lin1,ZHANG De-Yun1,XIAO Yao1,WANG Guo-Xin1,WANG Zhen-Zhong1, WANG Li-Xin2,HAN Jun3,YUAN Cheng-Guo4,YOU Ming-Shan1,LIU Zhi-Yong1,*   

  1. 1 Department of Plant Genetics & Breeding, China Agricultural University, Beijing 100193, China; 2 Beijing Academy of Agriculture and Forestry Sciences, Beijing 100197, China; 3 Beijing University of Agriculture, Beijing 102206, China; 4 Gaoyi Stock Seed Farm, Gaoyi 051330, Hebei, China
  • Received:2014-09-09 Revised:2014-12-19 Published:2015-03-12 Published online:2014-12-19
  • Contact: 刘志勇, E-mail: zhiyongliu@cau.edu.cn

摘要:

小麦穗部性状与单株产量密切相关。本研究以小麦骨干亲本燕大1817与优良品系北农6号衍生的269个重组自交系为材料,通过在北京和河北石家庄的2年田间试验数据,利用本实验室已构建的高密度SNP和SSR遗传连锁图谱进行穗长、穗粒数和穗粒重QTL定位。采用完备复合区间作图法共检测到29个穗部性状加性效应QTL,其中10个穗长QTL分布于1B、2D、3A、3B、4A、5A、5B、6A和7D染色体上,解释的表型变异率为2.96%~9.63%,QSl.cau-4A.2在所有5个环境中均能被检测到,解释的表型变异为5.89%~9.62%,另有7个QTL能在2个或2个以上环境中被检测到;8个穗粒数相关QTL分布于1A、3A、3D、4A和5B染色体上,解释的表型变异为4.06%~11.17%,为单个环境QTL。11个与穗粒重相关QTL分布于1A、1B、2A、2D、3A、4D、5A、5B和6B染色体上,解释的表型变异为2.79%~16.12%,其中QGws.cau-1B、QGws.cau-3AQGws.cau-6B.2在2个或者2个以上环境中能被检测到。另外,鉴定出6个分布于1A、2D、3A、4A和5B染色体上的QTL富集区段。

关键词: 小麦, 重组自交系, 穗部性状, QTL

Abstract:

 Spike length (SL), grain number per spike (GNS), and grain weight per spike (GWS) are important spike traits associated with yield in wheat. In this study, quantitative trait loci (QTLs) for spike traits were mapped using an available high-density SNP and SSR genetic linkage map developed from a recombinant inbred line (RIL) population of Yanda 1817 × Beinong 6. Using phenotypic data on two locations (Beijing and Shijiazhuang) in two years (2011–2012 and 2012–2013 growing seasons), 29 QTLs for SL, GNS and GWS were detected by inclusive composite interval mapping (ICIM) (LOD ≥ 2.5). Among which, 10 QTLs for spike length were mapped on chromosomes 1B, 2D, 3A, 3B, 4A, 5A, 5B, 6A, and 7D with phenotypic variations ranging from 2.96% to 9.63%. A stable and major QTL associated with SL, QSl.cau-4A.2, was detected in all the environments with phenotypic variations ranging from 5.89% to 9.62%. Eight QTLs for GNS were found on chromosomes 1A, 3A, 3D, 4A, and 5B with phenotypic variations from 4.06% to 11.17%. However, they were all environments sensitive and detected in a single environment. Eleven QTLs for GWS were mapped on chromosomes 1A, 1B, 2A, 2D, 3A, 4D, 5A, 5B, and 6B with phenotypic variations ranging from 2.79% to 16.12%. The QTL QGws.cau-6B.2 was identified in three environments and the favorable allele was contributed by Beinong 6. The stable QTLs on chromosomes 3A, 4A, 6B, and 7D identified in this study may serve as target sites in marker-assisted selection of spike related traits in wheat breeding program.

Key words: Wheat, RILs, Spike trait, QTL

[1]Giura A, Saulescu N N. Chromosomal location of genes controlling grain size in a large grained selection of wheat (Triticum aestivum L.). Euphytica, 1996, 89: 77–80



[2]Börner A, Schumann E, Fiirste A, Cöster H, Leithold B, Röder M S, Weber W E. Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat (Triticum aestivum L). Theor Appl Genet, 2002, 105: 921–936



[3]Jantasuriyarat C, Vales M I, Waston C J W, Riera-Lizarazu O. Identification and mapping of genetic loci affecting the free-threshing habit and spike compactness in wheat (Triticum aestivum L). Theor Appl Genet, 2004, 108: 261–273



[4]Cui F, Ding A M, Li J, Zhao C H, Wang L, Wang X Q, Qi X L, Li X F, Li G Y, Gao J R, Wang H G. QTL detection of seven spike-related traits and their genetic correlation in wheat using two related RIL populations. Euphytica, 2012, 186: 177–192



[5]Cui F, Zhao C H, Li J, Ding A M, Li X F, Bao Y G, Li J M, Ji J, Wang H G. Kernel weight per spike: what contributes to it at the individual QTL level? Mol Breed, 2012, 31: 265–278



[6]姚琴, 周荣华, 潘昱名, 傅体华, 贾继增. 小麦品种偃展1号与品系早穗30重组自交系群体遗传连锁图谱构建及重要农艺性状的QTL分析. 中国农业科学, 2010, 43: 4130–4139



Yao Q, Zhou R H, Pan Y M, Fu T H, Jia J Z. Construction of genetic linkage map and QTL analysis of agronomic important traits based on a RIL population derived from common wheat variety Yanzhan 1 and Zaosui 30. Sci Agric Sin, 2010, 43: 4130–4139 (in Chinese with English abstract).



[7]Ma Z Q, Zhao D M, Zhang C Q, Zhang Z Z, Xue S L, Lin F, Kong Z X, Tian D G, Luo Q Y. Molecular genetic analysis of five spike-related traits in wheat using RIL and immortalized F2 populations. Mol Gen Genomics, 2007, 277: 31–42



[8]Sourdille P, Cadalen T, Guyomarc’h H, Snape J W, Perretant M R, Charmet G, Boeuf C, Bernard S, Bernard M. An update of the Courtot × Chinese Spring intervarietal molecular marker linkage map for the QTL detection of agronomic traits in wheat. Theor Appl Genet, 2003, 106: 530–538



[9]Heidari B, Sayed-Tabatabaei B E, Saeidi G, Kearsey M, Suenaga K. Mapping QTL for grain yield, yield components, and spike features in a doubled haploid population of bread wheat. Genome, 2011, 54: 517–527



[10]张坤普, 徐宪斌, 田纪春. 小麦籽粒产量及穗部相关性状的QTL定位. 作物学报, 2009, 35: 270–278



Zhang K P, Xu X B, Tian J C. QTL Mapping for grain yield and spike related traits in common wheat. Acta Agron Sin, 2009, 35: 270–278 (in Chinese with English abstract).



[11]Huang X Q, Kempf H, Ganal M W, Röder M S. Advanced backcross QTL analysis in progenies derived from a cross between a German elite winter wheat variety and a synthetic wheat (Triticum aestivum L). Theor Appl Genet, 2004, 109: 933–943



[12]王瑾, 廖祥政, 杨学举, 周荣华, 贾继增. 人工合成小麦Am3大穗多粒QTL的发掘与利用. 植物遗传资源学报, 2008, 9: 277–282



Wang J, Liao X Z, Yang X J, Zhou R H, Jia J Z. Mapping of large-spike and much-kernel QTL by using a synthetic wheat Am3 as donor. J Plant Genet Resour, 2008, 9: 277–282 (in Chinese with English abstract)



[13]卢翔, 张锦鹏, 王化俊, 杨欣明, 李秀全, 李立会. 小麦-冰草衍生后代3558-2穗部相关性状的遗传分析和QTL定位. 植物遗传资源学报, 2011, 12: 86–91



Lu X, Zhang J P, Wang H J, Yang X M, Li L H. Genetic analysis and QTL mapping of wheat spike traits in a derivative line 3558-2 from wheat × Agropyron cristatum offspring. J Plant Genet Resour, 2011, 12: 86–91 (in Chinese with English abstract)



[14]Zhang D L, Hao C Y, Wang L F, Zhang X Y. Identifying loci influencing grain number by microsatellite screening in bread wheat (Triticum aestivum L). Planta, 2012, 236: 1507–1517



[15]Cavanagh C R, Chao S, Wang S, Huang B E, Stephen S, Kiani S, Forrest K, Saintenac C, Brown-Guedira G L, Akhunova A. Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars. Proc Natl Acad Sci USA, 2013, 110: 8057–8062



[16]Wang S, Wong D, Forrest K, Allen A, Chao S, Huang B, Maccafem M, Salvi S, Milner S G, Cattivelli L, Mastrangelo A M, Whan A, Stephen S, Barker G, Wieseke R, Plieske J, Lillemo M, Mather D, Appels R, Dolferus R, Brown-Guedira G, Korol A, Akhunova A R, Feuillet C, Salse J, Morgante M, Pozniak C, Luo M C, Dvorak J, Morell M, Dubcovsky J, Ganal M, Tuberosa R, Lawley C, Mikoulitch I, Cavanagh C, Edwards K J, Hayden M, Akhunov E. Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnol J, 2014, 12: 787–796



[17]Li H H, Ye G Y, Wang J K. A modified algorithm for the improvement of composite interval mapping. Genetics, 2007, 175: 361–374



[18]王建康. 数量性状基因的完备区间作图方法. 作物学报, 2009, 35: 239–245



    Wang J K. Inclusive composite interval mapping of quantitative trait genes. Acta Agron Sin, 2009, 35: 239–245 (in Chinese with English abstract).



[19]曾正兵, 钟秀丽, 王道龙, 郭金耀, 赵鹏, 王晓光, 韩立帅. 冬小麦拔节后幼穗低温敏感期的鉴定. 自然灾害学报, 2006, 15: 297–300



Zeng Z B, Zhong X L, Wang D L, Guo J Y, Zhao P, Wang X G, Han L S. Identification of young ear’s low temperature sensitive phase after jointing stage of winter wheat. J Nat Disasters, 2006, 15: 297–300 (in Chinese with English abstract)



[20]刘璇, 王瑞丽, 周伟, 方保停, 郑宏远, 张艳林, 詹克慧. 春季低温对冬小麦穗部发育和粒重的影响. 河南农业大学学报, 2013, 47: 373–380



Liu X, Wang R L, Zhou W, Fang B T, Zheng H Y, Zhang Y L, Zhan K H. Effect of spring low temperature on ear development and grain weight of winter wheat. J Henan Agric Univ, 2013, 47: 373–380 (in Chinese with English abstract).



[21]Somers D J, Isaac P, Edwards K. A high-density microsatellite consensus map for bread wheat (Triticum aestivum L). Theor Appl Genet, 2004, 109: 1105–1114

[1] 胡文静, 李东升, 裔新, 张春梅, 张勇. 小麦穗部性状和株高的QTL定位及育种标记开发和验证[J]. 作物学报, 2022, 48(6): 1346-1356.
[2] 郭星宇, 刘朋召, 王瑞, 王小利, 李军. 旱地冬小麦产量、氮肥利用率及土壤氮素平衡对降水年型与施氮量的响应[J]. 作物学报, 2022, 48(5): 1262-1272.
[3] 于春淼, 张勇, 王好让, 杨兴勇, 董全中, 薛红, 张明明, 李微微, 王磊, 胡凯凤, 谷勇哲, 邱丽娟. 栽培大豆×半野生大豆高密度遗传图谱构建及株高QTL定位[J]. 作物学报, 2022, 48(5): 1091-1102.
[4] 付美玉, 熊宏春, 周春云, 郭会君, 谢永盾, 赵林姝, 古佳玉, 赵世荣, 丁玉萍, 徐延浩, 刘录祥. 小麦矮秆突变体je0098的遗传分析与其矮秆基因定位[J]. 作物学报, 2022, 48(3): 580-589.
[5] 冯健超, 许倍铭, 江薛丽, 胡海洲, 马英, 王晨阳, 王永华, 马冬云. 小麦籽粒不同层次酚类物质与抗氧化活性差异及氮肥调控效应[J]. 作物学报, 2022, 48(3): 704-715.
[6] 刘运景, 郑飞娜, 张秀, 初金鹏, 于海涛, 代兴龙, 贺明荣. 宽幅播种对强筋小麦籽粒产量、品质和氮素吸收利用的影响[J]. 作物学报, 2022, 48(3): 716-725.
[7] 马红勃, 刘东涛, 冯国华, 王静, 朱雪成, 张会云, 刘静, 刘立伟, 易媛. 黄淮麦区Fhb1基因的育种应用[J]. 作物学报, 2022, 48(3): 747-758.
[8] 张艳波, 王袁, 冯甘雨, 段慧蓉, 刘海英. 棉籽油分和3种主要脂肪酸含量QTL分析[J]. 作物学报, 2022, 48(2): 380-395.
[9] 王洋洋, 贺利, 任德超, 段剑钊, 胡新, 刘万代, 郭天财, 王永华, 冯伟. 基于主成分-聚类分析的不同水分冬小麦晚霜冻害评价[J]. 作物学报, 2022, 48(2): 448-462.
[10] 陈新宜, 宋宇航, 张孟寒, 李小艳, 李华, 汪月霞, 齐学礼. 干旱对不同品种小麦幼苗的生理生化胁迫以及外源5-氨基乙酰丙酸的缓解作用[J]. 作物学报, 2022, 48(2): 478-487.
[11] 徐龙龙, 殷文, 胡发龙, 范虹, 樊志龙, 赵财, 于爱忠, 柴强. 水氮减量对地膜玉米免耕轮作小麦主要光合生理参数的影响[J]. 作物学报, 2022, 48(2): 437-447.
[12] 马博闻, 李庆, 蔡剑, 周琴, 黄梅, 戴廷波, 王笑, 姜东. 花前渍水锻炼调控花后小麦耐渍性的生理机制研究[J]. 作物学报, 2022, 48(1): 151-164.
[13] 孟颖, 邢蕾蕾, 曹晓红, 郭光艳, 柴建芳, 秘彩莉. 小麦Ta4CL1基因的克隆及其在促进转基因拟南芥生长和木质素沉积中的功能[J]. 作物学报, 2022, 48(1): 63-75.
[14] 韦一昊, 于美琴, 张晓娇, 王露露, 张志勇, 马新明, 李会强, 王小纯. 小麦谷氨酰胺合成酶基因可变剪接分析[J]. 作物学报, 2022, 48(1): 40-47.
[15] 李玲红, 张哲, 陈永明, 尤明山, 倪中福, 邢界文. 普通小麦颖壳蜡质缺失突变体glossy1的转录组分析[J]. 作物学报, 2022, 48(1): 48-62.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!