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Genetic dissection of the albino hull mutations in barley (Hordeum vulgare L.)

SUN Man1,2,AN Chao-Dan2,GAO Guang-Qi2,GUO Jie1,YANG Ping2,JIANG Cong-Cong2,*   

  1. 1 College of Agriculture, Shanxi Agricultural University, Jinzhong 030801, Shanxi, China; 2 Key Laboratory of Grain Crop Genetic Resources Evaluation and Utilization, Ministry of Agriculture and Rural Affairs / Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
  • Received:2024-03-01 Revised:2024-06-20 Accepted:2024-06-20 Published:2024-07-15
  • Supported by:
    This study was supported by Agricultural Science and Technology Innovation Program of Chinese Academy of Agricultural Sciences (Young Talent Project granted to Ping Yang).

Abstract:

Lemma and palea are the outermost organs on each floret of barley (Hordeum vulgare L.), where the majority of spike photosynthesis occurs, supplying carbohydrates to the developing grains. The barley albino hull (alh) mutants, obtained from EMS mutagenesis, showed albinistic lemma and palea, as well as albinistic pulvini, stem nodes, and stem bases, while the leaves and awns remain green. In this study, multiple allelic alh mutants were identified, and segregating populations were generated accordingly. Genetic analysis indicated that a single recessive gene is responsible for the alh phenotype. Through re-sequencing of the candidate gene in multiple alh mutants, and co-segregation tests using competitive allele-specific PCR (KASP) markers, loss-of-function mutations in the gene HvGLK2 were shown to account for the alh phenotype. Each of the three independent mutations identified in this study is distinct from previously reported albino lemma variants such as alm1 or ebu-a. HvGLK2 encodes a Golden 2-like (GLK2) transcription factor, belonging to the GARP subfamily of MYB transcription factors, and has a paralog designated GLK1 in most monocot and dicot species. The temporal and spatial expression patterns showed that HvGLK2 is abundantly transcribed in senescent leaves, lemmas, and rachises. This study highlights the importance of HvGLK2 in chlorophyll synthesis in various organs, including lemma, palea, and stem nodes of barley plants. Moreover, it provides valuable materials for further studies aimed at evaluating the contribution of spike photosynthesis to the eventual grain yield.

Key words: barley, hull, albino mutant, HvGLK2, loss-of-function

[1] Nishantha M D L C. 野生大麦农艺性状的多样性及其遗传基础. 西北农林科技大学研究生院博士学位论文, 陕西杨凌, 2018.
Nishantha M D L C. Diversity of Wild Barley in Agronomic Traits And Its Genetic Basis. PhD Dissertation of Northwest A&F University, Yangling, Shaanxi, China, 2018 (in Chinese with English abstract).

[2] Knüpffer H. Genetics and genomics of the triticeae. In: Feuillet C, Muehlbauer G J, eds. Plant Genetics and Genomics: Crops and Models. New York: Springer US, 2009. pp 31–79.

[3] Jiang C C, Lei M M, Guo Y, Gao G Q, Shi L J, Jin Y L, Cai Y, Himmelbach A, Zhou S H, He Q, Yao X F, Kan J H, Haberer G, Duan F Y, Li L H, Liu J, Zhang J, Spannagl M, Liu C M, Stein N, Feng Z Y, Mascher M, Yang P. A reference-guided TILLING by amplicon-sequencing platform supports forward and reverse genetics in barley. Plant Commun, 2022, 3: 100317.

[4] Frey-Wyssling A, Buttrose M S. Photosynthesis in the ear of barley. Nature, 1959, 184: 2031–2032.

[5] Duffus C M, Cochrane M P. Formation of the barley grain-morphology, physiology, and biochemistry. In: MacGregor A W, Bhatty R S, eds. Barley: Chemistry and Technology. St Paul: American Association of Cereal Chemists, 1993. pp 31–72.

[6] Abebe T, Skadsen R W, Kaeppler H F. Cloning and identification of highly expressed genes in barley lemma and palea. Crop Sci, 2004, 44: 942–950.

[7] Ziegler-Jöns A. Gas-exchange of ears of cereals in response to carbon dioxide and light: II. Occurrence of a C3−C4 intermediate type of photosynthesis. Planta, 1989, 178: 164–175.

[8] Hua W, Zhang X Q, Zhu J H, Shang Y, Wang J M, Jia Q J, Zhang Q S, Yang J M, Li C D. Identification and fine mapping of a white husk gene in barley (Hordeum vulgare L.). PLoS One, 2016, 11: e0152128.

[9] Takahashi R, Hayashi J. Linkage study of albino lemma character in barley. Berichte des Ohara Instituts für landwirtschaftliche Biologie, Okayama Universität, 1959, 11: 132–140.

[10] Taketa S, Hattori M, Takami T, Himi E, Sakamoto W. Mutations in a Golden2-Like gene cause reduced seed weight in barley albino lemma 1 mutants. Plant Cell Physiol, 2021, 62: 447–457.

[11] Yeh S Y, Lin H H, Chang Y M, Chang Y L, Chang C K, Huang Y C, Ho Y W, Lin C Y, Zheng J Z, Jane W N, Ng C Y, Lu M Y, Lai I L, To K Y, Li W H, Ku M S B. Maize Golden2-like transcription factors boost rice chloroplast development, photosynthesis, and grain yield. Plant Physiol, 2022, 188: 442–459.

[12] 卫云丰. 拟南芥PGA37转录因子调控叶绿体发育的分子机制. 山西农业大学硕士学位论文, 山西晋中, 2020.
Wei Y F. Molecular Mechanisms of Arabidopsis PGA37 Transcription Factor in Regulating Chloroplast Development. MS Thesis of Shanxi Agricultural University, Jinzhong, Shanxi, China, 2020 (in Chinese with English abstract).

[13] Song J, Wei X J, Shao G N, Sheng Z H, Chen D B, Liu C L, Jiao G A, Xie L H, Tang S Q, Hu P S. The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant Mol Biol, 2013, 84: 301–314.

[14] Tsuchiya T. Linkage maps of barley. Barley Genet Newslett, 1980, 10: 95–98.

[15] 金婷, 杨建明, 贾巧君, 汪军妹, 吴宽然, 陈和, 乔海龙, 华为. 大麦白化颖壳突变体的遗传、生理及品质分析. 核农学报, 2013, 27: 1624–1629.
Jin T, Yang J M, Jia Q J, Wang J M, Wu K R, Chen H, Qiao H L, Hua W. Heredity, physiology and malt quality analysis of albino-lemma barley. J Nucl Agri Sci, 2013, 27: 1624–1629 (in Chinese with English abstract).

[16] Qin D D, Dong J, Xu F C, Guo G G, Ge S T, Xu Q, Xu Y X, Li M F. Characterization and fine mapping of a novel barley Stage Green-Revertible Albino gene (HvSGRA) by bulked segregant analysis based on SSR assay and specific length amplified fragment sequencing. BMC Genom, 2015, 16: 838.

[17] Faris D G. Physiology and Genetics of the Kernel Color of Barley. PhD Dissertation of University of British Columbia, New York, America, 1955.

[18] Lundqvist U, Franckowiak J D, Konishi T. New and revised descriptions of barley genes. Barley Genet Newslett, 1997, 26: 209.

[19] Yang P, Perovic D, Habekuß A, Zhou R N, Graner A, Ordon F, Stein N. Gene-based high-density mapping of the gene rym7 conferring resistance to Barley mild mosaic virus (BaMMV). Mol Breed, 2013, 32: 27–37.

[20] 安朝丹, 高广奇, 杨平, 程小毛, 蒋枞璁. 大麦钩芒突变体的遗传解析. 植物遗传资源学报, 2023, 24: 1725–1735.
An C D, Gao G Q, Yang P, Cheng X M, Jiang C C. Genetic dissection of hooded awn mutation in cultivated barley (Hordeum vulgare L.). J Plant Genet Resour, 2023, 24: 1725–1735 (in Chinese with English abstract).

[21] 高广奇. 大麦黄花叶病抗性新位点rym7H-1遗传解析. 中国农业科学院硕士学位论文, 北京, 2021.
Gao G Q. Genetic Dissertation of rym7H-1, a New Resistant Locus against BaYMV/BaMMV in Cultivated Barley. MS Thesis of Chinese Academy of Agricultural Sciences, Beijing, China, 2021 (in Chinese with English abstract).

[22] Riechmann J L, Heard J, Martin G. Transcription factors: genome-wide comparative analysis among eukaryotes. Science, 2000, 290: 2105–2110.

[23] 刘俊芳, 张佳, 李贺, 赵婷婷, 李景富. 植物GOLDEN2-Like转录因子研究进展. 分子植物育种, 2017, 15: 3949–3956.
Liu J F, Zhang J, Li H, Zhao T T, Li J F. Research progress of plant GOLDEN2-Like transcription factor. Mol Plant Breed, 2017, 15: 3949–3956 (in Chinese with English abstract).

[24] Fitter D W, Martin D J, Copley M J, Scotland R W, Langdale J A. GLK gene pairs regulate chloroplast development in diverse plant species. Plant J, 2002, 31: 713–727.

[25] Brand A, Borovsky Y, Hill T, Rahman K A A, Bellalou A, Deynze A V, Paran I. CaGLK2 regulates natural variation of chlorophyll content and fruit color in pepper fruit. Theor Appl Genet, 2014, 127: 2139–2148.

[26] Powell A L T, Nguyen C V, Hill T, Cheng K L, Figueroa-Balderas R, Aktas H, Ashrafi H, Pons C, Fernández-Muñoz R, Vicente A, Lopez-Baltazar J, Barry C S, Liu Y S, Chetelat R, Granell A, Deynze A V, Giovannoni J J, Bennett A B. Uniform ripening encodes a golden 2-like transcription factor regulating tomato fruit chloroplast development. Science, 2012, 336: 1711–1715.

[27] 刘星, 苏良辰, 张拜宏, 曾丽丹, 李媚娟, 李玲. 异源表达花生基因AhGLK1对拟南芥glk1glk2突变体表型特征及抗旱性的影响. 华南师范大学学报(自然科学版), 2020, 52: 78–84.

Liu X, Su L C, Zhang B H, Zeng L D, Li M J, Li L. The effect of heterologous expression of peanut gene AhGLK1 on the phenotypic characteristics and drought resistance of Arabidopsis glk1glk2 mutants. J South China Normal Univ (Nat Sci Ed), 2020, 52: 78–84 (in Chinese with English abstract).

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