Welcome to Acta Agronomica Sinica,

Acta Agron Sin ›› 2007, Vol. 33 ›› Issue (11): 1748-1754.

• ORIGINAL PAPERS • Previous Articles     Next Articles

Cloning and Expression of a Full-Length cDNA of SoFtsH Gene in Potato under Drought Stress

FAN Min13,JIN Li-Ping2,HUANG San-Wen2,XIE Kai-Yun2,LIU Qing-Chang1,QU Dong-Yu12*   

  1. 1 College of Agronomy and Biotechnology, China Agricultural University, Beijing 100094; 2 Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081; 3 Department of Horticulture, Xinjiang Agricultural University, Urumchi 830052, Xinjiang, China
  • Received:2007-03-05 Revised:1900-01-01 Online:2007-11-12 Published:2007-11-12
  • Contact: QU Dong-Yu

Abstract:

Filamentation temperature-sensitive H (FtsH) is an ATP dependent metalloprotease and chaperone identified in many prokaryotes and eukaryotes; its homologs have been identified in many plants. FtsH belongs to a larger family of proteins collectively known as the AAA proteins (ATPases associated with diverse cellular activities). Function studies have revealed an important role for FtsH in stress responses. On the basis of one cDNA-AFLP differential fragment isolated from induced mRNA under drought in the potato (Solanum tuberosum L.) genotype H145 that is diploid with drought tolerance, the full length cDNA of a putative FtsH gene, SoFtsH gene was cloned by rapid amplification of cDNA ends (RACE). The gene consists of 723 bp encoding a predicted protein of 129 amino acids. Sequence analysis revealed that it has two 2Fe-2S ferredoxins, iron-sulfur binding regions. The putative signal-peptide, transmembane regions and the Zn2+ binding domain, characteristic of FtsH metalloproteases family, were found in the SoFtsH protein. Alignment and phylogenetic analysis of the amino acid sequence deduced from the fragment and the FtsH sequences of other plants retrieved from GenBank were performed with ClustalX program, which showed that SoFtsH shares high identity (>90%) with FtsH reported in tomato, tobacco and Arabidopsis etc. Transcription level of of SoFtsH was investigated by semi-quantitative RT-PCR and Northern blot, using actin gene as a control. The result showed that the transcript of SoFtsH was significantly enhanced under drought. The different profiles of transcript of SoFtsH gene were detected under continuous drought between drought tolerant H145 and drought sensitive H214 that is susceptive to drought. The results suggest that SoFtsH gene is closely related with the drought tolerance in potato.

Key words: Potato, Solanum tuberosum L., Drought tolerance, Full-length cDNA, FtsH

[1] ZHOU Wen-Qi, QIANG Xiao-Xia, WANG Sen, JIANG Jing-Wen, WEI Wan-Rong. Mechanism of drought and salt tolerance of OsLPL2/PIR gene in rice [J]. Acta Agronomica Sinica, 2022, 48(6): 1401-1415.
[2] WANG Hai-Bo, YING Jing-Wen, HE Li, YE Wen-Xuan, TU Wei, CAI Xing-Kui, SONG Bo-Tao, LIU Jun. Identification of chromosome loss and rearrangement in potato and eggplant somatic hybrids by rDNA and telomere repeats [J]. Acta Agronomica Sinica, 2022, 48(5): 1273-1278.
[3] SHI Yan-Yan, MA Zhi-Hua, WU Chun-Hua, ZHOU Yong-Jin, LI Rong. Effects of ridge tillage with film mulching in furrow on photosynthetic characteristics of potato and yield formation in dryland farming [J]. Acta Agronomica Sinica, 2022, 48(5): 1288-1297.
[4] FENG Ya, ZHU Xi, LUO Hong-Yu, LI Shi-Gui, ZHANG Ning, SI Huai-Jun. Functional analysis of StMAPK4 in response to low temperature stress in potato [J]. Acta Agronomica Sinica, 2022, 48(4): 896-907.
[5] ZHANG Xia, YU Zhuo, JIN Xing-Hong, YU Xiao-Xia, LI Jing-Wei, LI Jia-Qi. Development and characterization analysis of potato SSR primers and the amplification research in colored potato materials [J]. Acta Agronomica Sinica, 2022, 48(4): 920-929.
[6] JIN Rong, JIANG Wei, LIU Ming, ZHAO Peng, ZHANG Qiang-Qiang, LI Tie-Xin, WANG Dan-Feng, FAN Wen-Jing, ZHANG Ai-Jun, TANG Zhong-Hou. Genome-wide characterization and expression analysis of Dof family genes in sweetpotato [J]. Acta Agronomica Sinica, 2022, 48(3): 608-623.
[7] TAN Xue-Lian, GUO Tian-Wen, HU Xin-Yuan, ZHANG Ping-Liang, ZENG Jun, LIU Xiao-Wei. Characteristics of microbial community in the rhizosphere soil of continuous potato cropping in arid regions of the Loess Plateau [J]. Acta Agronomica Sinica, 2022, 48(3): 682-694.
[8] ZHANG Hai-Yan, XIE Bei-Tao, JIANG Chang-Song, FENG Xiang-Yang, ZHANG Qiao, DONG Shun-Xu, WANG Bao-Qing, ZHANG Li-Ming, QIN Zhen, DUAN Wen-Xue. Screening of leaf physiological characteristics and drought-tolerant indexes of sweetpotato cultivars with drought resistance [J]. Acta Agronomica Sinica, 2022, 48(2): 518-528.
[9] JIAN Hong-Ju, SHANG Li-Na, JIN Zhong-Hui, DING Yi, LI Yan, WANG Ji-Chun, HU Bai-Geng, Vadim Khassanov, LYU Dian-Qiu. Genome-wide identification and characterization of PIF genes and their response to high temperature stress in potato [J]. Acta Agronomica Sinica, 2022, 48(1): 86-98.
[10] XU De-Rong, SUN Chao, BI Zhen-Zhen, QIN Tian-Yuan, WANG Yi-Hao, LI Cheng-Ju, FAN You-Fang, LIU Yin-Du, ZHANG Jun-Lian, BAI Jiang-Ping. Identification of StDRO1 gene polymorphism and association analysis with root traits in potato [J]. Acta Agronomica Sinica, 2022, 48(1): 76-85.
[11] ZHANG Si-Meng, NI Wen-Rong, LYU Zun-Fu, LIN Yan, LIN Li-Zhuo, ZHONG Zi-Yu, CUI Peng, LU Guo-Quan. Identification and index screening of soft rot resistance at harvest stage in sweetpotato [J]. Acta Agronomica Sinica, 2021, 47(8): 1450-1459.
[12] SONG Tian-Xiao, LIU Yi, RAO Li-Ping, Soviguidi Deka Reine Judesse, ZHU Guo-Peng, YANG Xin-Sun. Identification and expression analysis of cell wall invertase IbCWIN gene family members in sweet potato [J]. Acta Agronomica Sinica, 2021, 47(7): 1297-1308.
[13] TANG Rui-Min, JIA Xiao-Yun, ZHU Wen-Jiao, YIN Jing-Ming, YANG Qing. Cloning of potato heat shock transcription factor StHsfA3 gene and its functional analysis in heat tolerance [J]. Acta Agronomica Sinica, 2021, 47(4): 672-683.
[14] LI Peng-Cheng, BI Zhen-Zhen, SUN Chao, QIN Tian-Yuan, LIANG Wen-Jun, WANG Yi-Hao, XU De-Rong, LIU Yu-Hui, ZHANG Jun-Lian, BAI Jiang-Ping. Key genes mining of DNA methylation involved in regulating drought stress response in potato [J]. Acta Agronomica Sinica, 2021, 47(4): 599-612.
[15] QIN Tian-Yuan, LIU Yu-Hui, SUN Chao, BI Zhen-Zhen, LI An-Yi, XU De-Rong, WANG Yi-Hao, ZHANG Jun-Lian, BAI Jiang-Ping. Identification of StIgt gene family and expression profile analysis of response to drought stress in potato [J]. Acta Agronomica Sinica, 2021, 47(4): 780-786.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!