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Acta Agron Sin ›› 2016, Vol. 42 ›› Issue (02): 201-211.doi: 10.3724/SP.J.1006.2016.00201

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Genome-wide Identification and Function Analysis of SBP Gene Family in Maize

PENG Hua1,**,HE Xiu-Jing2,**,GAO Jian4,LUO Mao3,PAN Guang-Tang2,*,ZHANG Zhi-Ming2,*   

  1. 1 SiChuan Tourism College, Chengdu 610100, China; Maize Research Institute of Sichuan Agricultural University, Wenjiang 611130, China; 3 Research Center for Drug Discovery of Luzhou Medical College, Luzhou 646000, China, 4 Institute of Pathology and Southwest Cancer Center, Southwest Hospital, Third Military Medical University, and Key Laboratory of Tumor Immunopathology, Ministry of Education, Chongqing 400038, China
  • Received:2015-05-12 Revised:2015-11-20 Online:2016-02-12 Published:2015-12-07
  • Contact: 潘光堂, 张志明, E-mail: panlab605@gmail.com, Tel: 86-28-86290917
  • Supported by:

    This study was supported by the National High Technology Research and Development Program of China (863 Program) (2012AA10A307) and Youth Science Fund Project from Technological Office of Sichuan Province (2015JQO021).

Abstract:

SBP gene family, as a plant special transcription factors is involved in plant growth and development, as well as many physiological and biochemical processes. Recently, SBP transcription factor family has been identified in model plants, such as Arabidopsis and Oryza sativa; however, systematic analysis of SBP transcription factor family in maize (Zea mays L.) is scarcely. In this study, based on homology alignment technology, we aligned all known SBP TFs from Arabidopsis and Oryza sativa with those from maize genome sequence to mine novel SBP TFs in maize. A total of 37 SBP TFs distributed in eight chromosomes were identified. Phylogenetic analysis indicated that SBP transcription factor genes have stronger homology, especially between Zea mays and Oryza sativa. Moreover, Promoters-cis Elements analysis of those SBP TFs demonstrated that they might be involved in plant growth and development, morphogenesis, adversity response, the development of flower organs and photosynthesis. It is probable that SBP TFs regulate plant growth and development through the multiple hormone of signaling transduction pathway, such as gibberellin, auxin, abscisic acid, and salicylic acid.

Key words: Maize, SBP TFs gene family, Bioinformatics

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