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Acta Agron Sin ›› 2005, Vol. 31 ›› Issue (10): 1300-1304.

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The Use of RAPD,ISSR and AFLP Markers for Analyzing Genetic Relationships among Sweetpotato Cultivars with Known Origin

HE Xue-Qin;LIU Qing-Chang;ZHAI Hong;WANG Yu-Ping   

  1. Key Laboratory of Crop Genomics and Genetic Improvement,Ministry of Agriculture,China Agricultural University, Beijing 100094, China
  • Received:2004-10-14 Revised:1900-01-01 Online:2005-10-12 Published:2005-10-12
  • Contact: LIU Qing-Chang

Abstract:

Sweetpotato, Ipomoea batatas (L.) Lam., is an important crop as food, feed and industrial materials grown worldwide. Because of its many biological complexities such natural heterozygote and cross-incompatibility, the analysis of the genetic relationships among cultivars is of interest not only for germplasm conservation but also for breeding purposes. Molecular techniques have been used broadly for germplasm characterization, variety identification, phylogenetic study and diversity analysis. There has been no report on analyzing genetic relationships among sweetpotato cultivars with known origin using molecular Markers. In the present study genetic relationships among seven sweetpotato cultivars with known origin were analysed using RAPD, ISSR and AFLP markers (Fig.1). Twenty-four RAPD primers, 14 ISSR primers and 9 AFLP primer pairs generated 173, 174 and 168 polymorphic bands, respectively (Fig.2, Table 1). For detecting the genetic differences among sweetpotato cultivars, the correlations among RAPD, ISSR and AFLP markers were significant with the highest correlation coefficient between RAPD and ISSR markers (0.9328). The ISSR-based genetic distances among the 7 sweetpotato cultivars, ranging from 0.1286 to 1.0932 with an average of 0.4883, were higher than those calculated with the other two markers. The dendrograms based on RAPD, ISSR and AFLP markers separately could detect genetic relationships of the 7 sweetpotato cultivars and the ISSR-based dendrogram was the best in agreement with their known origin, suggesting that ISSR is the powerful marker for analyzing genetic ralationships among sweetpotato cultivars (Fig.3).

Key words: Sweetpotato, RAPD, ISSR, AFLP, Genetic relationship

CLC Number: 

  • S531
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