Welcome to Acta Agronomica Sinica,

Acta Agron Sin ›› 2011, Vol. 37 ›› Issue (09): 1597-1604.doi: 10.3724/SP.J.1006.2011.01597

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Seed DNA Methylation in Response to Heat Stress in Brassica rapa L.

GAO Gui-Zhen,YING Fei,CHEN Bi-Yun,LI Hao,LÜ Xiao-Dan,YAN Gui-Xin,XU Kun,WU Xiao-Ming*   

  1. Oil Crops Research Institute, Chinese Academy of Agricultural Sciences / Key Laboratory of Oil Crops Biology of Ministry of Agriculture, Wuhan 430062, China
  • Received:2011-01-20 Revised:2011-04-27 Online:2011-09-12 Published:2011-06-28
  • Contact: 伍晓明, E-mail: wuxm@oilcrops.cn, Tel: 027-86812906

Abstract: High temperature or heat stress, causes thermal damage to plants, and affects plant growth, development, as well as seed longevity. By using a seed heat tolerant genotype qingyuanbendiyoucai and a seed heat susceptive genotype shaoxingaidaganyoucai, This study aimed at investigation of the effect of different temperature treaments on seed vigor and DNA methylation of these two landraces of Brassica rapa L. The result showed that the seed germination percentage and the vigor index present no significant difference from those of CK under 37°C and 4°C, the seed vigor declined significantly under 70°C of heat stress, and heat acclimation in 37°C for 2 h effectively enhanced seed thermo-tolerance. The results of MSAP analysis showed that the level of global DNA methylation decreased under 70°C of heat stress, both DNA methylation and demethylation were detected, and more DNA demethylation bands were recorded. Seed germinating potential, germination percentage, hypocotyl length, vigor index were significantly negatively correlatied with number of bands of full-methylated (both bands) at the internal cytosine, but positively correlated with the the number of bands of full-methylated (both bands) at the external cytosine. Most importantly, opposite patterns of DNA methylation were discovered in heat tolerant and susceptive seeds under 70°C heat stress, more bands of DNA demethylation were detected in the heat tolerant seeds, but more bands of DNA methylation were detected in the heat susceptive seeds, which suggested that DNA methylation and demethylation play an important role in seed heat tolerance, epigenetic regulation of gene expression by DNA methylation is important for plant to cope with heat stress.

Key words: Brassica rapa L, Heat acclimation, Heat stress, DNA methylation, Vigor index

[1]Rassoulzadegan M, Grandjean V, Gounon P, Vincent S, Gillot I, Cuzin F. RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse. Nature, 2006, 441: 469–474
[2]Chan S W L, Henderson I R, Jacobsen S E. Gardening the genome: DNA methylation in Arabidopsis thaliana. Nat Rev Genet, 2005, 6: 351–360
[3]Grant-Downton R T, Dickinson H G. Epigenetic and its implication for plant biology 2. The ‘epigenetic Epiphang’: epigenetics, evolution and beyond. Annal Bot, 2006, 97: 11–27
[4]Steward N, Ito M, Yamaguchi Y, Koizumi N, Sano H. Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress. J Biol Chem, 2002, 277: 37741–37746
[5]Li X-L(李雪林), Lin Z-X(林忠旭), Nie Y-C(聂以春), Guo X-P(郭小平), Zhang X-L(张献龙). MSAP analysis of epigenetic changes in cotton (Gossypium hirsutum L.) under salt stress. Acta Agron Sin (作物学报), 2009, 35(4): 588–596 (in Chinese with English abstract)
[6]Zhong L(钟兰), Wang J-B(王建波). The role of DNA hypermethylation in salt resistance of Triticum aestivum L. J Wuhan Bot Res (武汉植物学研究), 2007, 25(1): 102–104 (in Chinese with English abstract)
[7]Choi C S, Sano H. Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants. Mol Genet Genomics, 2007, 277: 589–600
[8]Hashida S N, Kitamura K, Mikami T, Kishima Y. Temperature shift coordinately changes the activity and the methylation state of transposon Tam3 in Antirrhinum majus. Plant Physiol, 2003, 132: 1207–1216
[9]Labra M, Ghiani A, Citterio S, Sgorbatis S, Sala F, Vannini C, Ruffini-Castiglione M, Bracale M. Analysis of cytosine methylation pattern in response to water deficit in pea root tips. Plant Biol, 2002, 4: 694–699
[10]Dyachenko O V, Zakharchenko N S, Shevchuk T V, Bohnert H J, Cushman J C, Buryanov Y L. Effect of hypermethylation of CCWGG sequences in DNA of Mesembryanthemum crystallinum plants on their adaptation to salt stress. Biochemistry, 2006, 71: 461–465
[11]Wada Y, Miyamoto K, Kusano T, Sano H. Association between up-regulation of stress-responsive genes and hypomethylation of genomic DNA in tobacco plants. Mol Genet Genom, 2004, 271: 658–666
[12]Gao G-Z(高桂珍), Wu X-M(伍晓明), Lü X-D(吕晓丹), Chen B-Y(陈碧云), Xu K(许鲲), Yan G-X(闫贵欣). Genotype differences of seed viability in rapeseed during storage at different temperature. Chin J Oil Crop Sci (油料作物学报), 2010, 32(4): 495–499(in Chinese with English abstract)
[13]Reyna-Lopez G E, Simpson J, Ruiz-Herrera J. Differences in DNA methylation patterns are detectable during the dimorphic transition of fungi by amplification of restriction polymorphisms. Mol Gen Genet, 1997, 253: 703–710
[14]Madlung A, Masuelli R W, Watson B, Reynolds S H, Davison J, Comai L. Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids. Plant Physiol, 2002, 29: 733–746
[15]Portis E, Acquadro A, Comino C, Lanteri S. Analysis of DNA methylation during germination of pepper (Capsicum annuum L.) seeds using methlation-sensitive amplification polymorohism (MSAP). Plant Sci, 2004, 166: 169–178
[16]Sha A H, Lin X H, Huang J B, Zhang D P. Analysis of DNA methylation related to rice adult plant resistance to bacterial blight based on methylation-sensitive AFLP(MSAP) analysis. Mol Genet Genom, 2005, 273: 484-490
[17]Lu G Y, Wu X M, Chen B Y, Gao G Z, Xu K. Evaluation of genetic and epigenetic modification in rapeseed (Brassica napus) induced by salt stress. J Integr Plant Biol, 2007, 49: 1599–1607
[18]Shaked H, Kashkush K, Ozkan H, Feldman M, Levy A A. Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat. Plant Cell, 2001, 13: l749–1759
[19]Xiong L Z, Xu C G, Saghai M A, Zhang Q. patterns of cytosine methylation in an elite rice hybrid and its parental lines, detected by a methylation-sensitive amplification polymorphism technique. Mol Gen Genet, 1999, 261: 439–446
[20]Larkindale J, Hall J D, Knight M R, Vierling E. Heat stress phenotypes of Arabidopsis mutants implicate multiple signaling pathways in the acquisition of thermo-tolerance. Plant Physiol, 2005, 138: 882–897
[21]Zhou R-G(周人纲), Fan Z-H(樊志和), Li X-Z(李晓芝), Wang Z-W(王占武), Han W(韩炜). The effect of heat acclimation on membrane thermo-stability and relative enzyme activity. Acta Agron Sin (作物学报), 1995, 21(5): 568–572 (in Chinese with English abstract)
[22]Ma X-D(马晓娣), Wang L(王丽), Jiang M(江矛), Peng H-R(彭惠茹). Difference in relative conductivity and ultra structure of leaf between two wheat cultivars with different thermo-tolerance under heat acclimation and heat stress. J China Agric Univ (中国农业大学学报), 2003, 8(3): 4–8 (in Chinese with English abstract)
[23]Long L K, Lin X Y, Zhai J Z, Kou H P, Yang W, Liu B. Heritable alteration in DNA methylation pattern occurred specifically at mobile elements in rice plants following hydrostatic pressurization. Biochem Biophys Res Commun, 2006, 340: 369–376
[24]Steward N, Kusano T, Sano H. Expression of ZmMET1, a gene encoding a DNA methyltransferase from maize, is associated not only with DNA replication in actively proliferating cells, but also wit h altered DNA methylation status in cold-stressed quiescent cells. Nucl Acids Res, 2000, 28: 3250–3259
[25]Pan Y-J(潘雅姣), Fu B-Y(傅彬英), Wang D(王迪), Zhu L-H(朱苓华), Li Z-K(黎志康). Spatial and temporal profiling of DNA methylation induced by drought stress in rice. Sci Agric Sin (中国农业科学), 2009, 42(9): 3009–3018 (in Chinese with English abstract)
[26]ZhaoY-L(赵云雷), Ye W-W(叶武威), Wang J-J(王俊娟), Fan B-X(樊保香). Analysis of DNA cytosine methylation on cotton under salt stress. Cotton Science Society of China, 2008
[27]Hua Y(华扬), Chen X-F(陈学峰), Xiong J-H(熊建华), Zhang Y-P(张义平), Zhu Y-G(朱英国). Isolation and analysis of differentially-methylated fragment CIDM7 in rice induced by cold stress. Hereditas (遗传), 2005, 27(4): 595–600 (in Chinese with English abstract)
[28]Grunau C, Renault E, Rosenthal A, Roizes G. MethDB-a public database for DNA methylation data. Nucl Acid Res, 2001, 29: 270–274
[1] ZHAO Wen-Qing, XU Wen-Zheng, YANG Liu-Yan, LIU Yu, ZHOU Zhi-Guo, WANG You-Hua. Different response of cotton leaves to heat stress is closely related to the night starch degradation [J]. Acta Agronomica Sinica, 2021, 47(9): 1680-1689.
[2] LI Zeng-Qiang, DING Xin-Chao, LU Hai, HU Ya-Li, YUE Jiao, HUANG Zhen, MO Liang-Yu, CHEN Li, CHEN Tao, CHEN Peng. Physiological characteristics and DNA methylation analysis under lead stress in kenaf (Hibiscus cannabinus L.) [J]. Acta Agronomica Sinica, 2021, 47(6): 1031-1042.
[3] TANG Rui-Min, JIA Xiao-Yun, ZHU Wen-Jiao, YIN Jing-Ming, YANG Qing. Cloning of potato heat shock transcription factor StHsfA3 gene and its functional analysis in heat tolerance [J]. Acta Agronomica Sinica, 2021, 47(4): 672-683.
[4] LI Peng-Cheng, BI Zhen-Zhen, SUN Chao, QIN Tian-Yuan, LIANG Wen-Jun, WANG Yi-Hao, XU De-Rong, LIU Yu-Hui, ZHANG Jun-Lian, BAI Jiang-Ping. Key genes mining of DNA methylation involved in regulating drought stress response in potato [J]. Acta Agronomica Sinica, 2021, 47(4): 599-612.
[5] LU Hai, LI Zeng-Qiang, TANG Mei-Qiong, LUO Deng-Jie, CAO Shan, YUE Jiao, HU Ya-Li, HUANG Zhen, CHEN Tao, CHEN Peng. DNA methylation in response to cadmium stress and expression of different methylated genes in kenaf [J]. Acta Agronomica Sinica, 2021, 47(12): 2324-2334.
[6] Yi YUAN,Shuang ZHU,Ting-Ting FANG,Jin-Jin JIANG,You-Ping WANG. Analysis of drought resistance and DNA methylation level of resynthesized Brassica napus [J]. Acta Agronomica Sinica, 2019, 45(5): 693-704.
[7] LI Peng-Cheng,BI Zhen-Zhen,LIANG Wen-Jun,SUN Chao,ZHANG Jun-Lian,BAI Jiang-Ping. DNA methylation involved in regulating drought stress response of potato [J]. Acta Agronomica Sinica, 2019, 45(10): 1595-1603.
[8] WANG Ya-Liang**,ZHANG Yu-Ping**,ZHU De-Feng*,XIANG Jing,WU Hui,CHEN Hui-Zhe,ZHANG Yi-Kai. Effect of Heat Stress on Spikelet Degeneration and Grain Filling at Panicle Initiation Period of Rice [J]. Acta Agron Sin, 2016, 42(09): 1402-1410.
[9] ZHANG Yang,HU Zhong-Ying,ZHAO Yue-Ming,LI Na,XIE Li-Nan. DNA Methylation Dynamic Analysis of Self Compatible Line and Self-Incompatible Line of Brassica oleracea var. acephala at Seed Germination Stage [J]. Acta Agron Sin, 2016, 42(04): 532-539.
[10] XIE Tao,RONG Hao,JIANG Jin-Jin*,KONG Yue-Qin,RAN Li-Ping,WU Jian,WANG You-Ping. Analysis of DNA Methylation Patterns in Resynthesized Brassica napus and Diploid Parents [J]. Acta Agron Sin, 2016, 42(04): 513-524.
[11] LI Xin,XIAO Lu,DU De-Zhi. Fine Mapping and Map Integration of Brsc1 Gene in Dahuang Rape (Brassica rapa L.) [J]. Acta Agron Sin, 2015, 41(07): 1039-1046.
[12] ZHOU Yan-Hua,CAO Hong-Li,YUE Chuan,WANG Lu,HAO Xin-Yuan,WANG Xin-Chao*,YANG Ya-Jun*. Changes of DNA Methylation Levels and Patterns in Tea Plant (Camellia sinensis) during Cold Acclimation [J]. Acta Agron Sin, 2015, 41(07): 1047-1055.
[13] TAN He-Lin,XU Xin-Ying,FU Li-Man,XIANG Xiao-E,LI Jian-Qiao,GUO Hao-Lun,YE Wen-Xue. Cloningand Expression Pattern of DNA Methylase I (MET1) from Brassica napus L. and Its Progenitors [J]. Acta Agron Sin, 2015, 41(03): 405-413.
[14] ZHAO Hui-Yan,XIAO Lu,ZHAO Zhi,DU De-Zhi*. Development of Molecular Markers and Map Integration for Seed Color Traits in Dahuang Rape (Brassica rapa L.) [J]. Acta Agron Sin, 2014, 40(06): 965-972.
[15] JIANG Wen-Wen,YIN Yan-Ping*,WANG Zhen-Lin*,LI Yong,YANG Wei-Bing,PENG Dian-Liang,YANG Dong-Qing,CUI Zheng-Yong,LU Kun-Li,LI Yan-Xia. Effects of Postponed Application of Nitrogen Fertilizer on Yield and Physiological Characteristics of Flag Leaf in Wheat under Post-Anthesis Heat Stress [J]. Acta Agron Sin, 2014, 40(05): 942-949.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!