作物学报 ›› 2012, Vol. 38 ›› Issue (05): 840-847.doi: 10.3724/SP.J.1006.2012.00840
邹自征1,2,陈建华1,*,栾明宝1,*,郭劲霞2,王超3,王晓飞1,许英1,孙志民1
ZOU Zi-Zheng1,2,CHEN Jian-Hua1,*,LUAN Ming-Bao1,*,GUO Jin-Xia2,WANG Chao3,WANG Xiao-Fei1,XU Ying1,SUN Zhi-Min1
摘要: 分别采用RSAP、SRAP和SSR 3种分子标记和田间性状对16份苎麻种质进行亲缘关系聚类,结果表明, 每对引物扩增出的多态性位点,SRAP标记最多,RSAP次之,SSR较少;根据SRAP标记和RSAP标记分类的结果都与RSAP+SRAP+SSR联合分类的结果基本一致,相关达到了极显著水平,而与SSR标记分类结果差异较大;分子标记聚类结果与田间性状的聚类结果接近程度, 依次为SRAP+RSAP+SSR>SRAP>RSAP>>SSR。在检测苎麻种质亲缘关系中,SRAP标记效果最优,RSAP标记稍逊,SSR标记最差。RSAP标记能较好地显示苎麻种属间的多态性和亲缘关系。以RSAP、SRAP、SSR标记联合分析,能更好地揭示种质之间的亲缘关系。
| [1]Lu H-R(卢浩然). Cultivation Science of Chinese Fiber Crops (中国麻类作物栽培学). Beijing: China Agriculture Press, 1992[2]Jie Y-C(揭雨成), Zhou Q-W(周青文), Chen P-D(陈佩度). Genetic relation analysis of ramie cultivars with RAPD mark. Acta Agron Sin (作物学报), 2002, 28(2): 254–259 (in Chinese with English abstract)[3]Qiu C-S(邱财生), Cheng C-H(程超华), Zhao L-L(赵立宁), Li Y-J(李育君), Zang G-G(臧巩固). Genetic relationship among Boehmeria nivea spp. revealed by RAPD. Hubei Agric Sci (湖北农业科学), 2011, 50(7): 1499–1501 (in Chinese with English abstract)[4]Jiang Y-B(蒋彦波), Jie Y-C(揭雨成), Zhou J-L(周建林), Xing H-C(邢虎成), She W(佘玮). Isolation and characterization of microsatellites from ramie [Boehmeria nivea L. Gaud.]. Acta Agron Sin (作物学报), 2007, 33(1): 158–162 (in Chinese with English abstract)[5]Xing X-L(邢秀龙). Development of Microsatellite Markers from Ramie and Its Application for Preliminary Study of Heterosis Forecast. MS Dissertation of Huazhong Agricultural University, 2008 (in Chinese with English abstract)[6]Chen J H, Luan M B, Song S F, Zou Z Z,Wang X F, Xu Y, Sun Z M. Isolation and characterization of EST-SSRs in the Ramie. Afr J Microbiol Res, 2011, 5: 3504–3508 [7]Zhao Z-W(赵中伟), Xu L-L(徐玲玲), Li T-J(李同建), Liao L(廖亮), Pan Q-H(潘其辉), Lai Z-J(赖占均), Shi Q-H(石庆华). Sampling strategy of Boehmeria nivea population by SSR molecular markers. J Anhui Agric Sci (安徽农业科学), 2009, 37(19): 8901–8903 (in Chinese with English abstract)[8]Ding M-Z(丁明忠), Pan G-T(潘光堂), Zhang Z-H(张中华), Yang Y(杨燕), Li L-A(李立安). Genetic relation analysis of Boehmeria nivea cultivars or lines from Sichuan with ISSR and construction of the molecular markers linked to male sterile Geng. J Nucl Agric Sci (核农学报), 2008, 22(2): 183–187 (in Chinese with English abstract)[9]Wen L(温岚), Yu C-M(喻春明), Wang Y-Z(王延周), Chen P(陈平), Chen J-K(陈继康), Tan L-T(谭龙涛), Xiong H-P(熊和平). Application of molecular marker SRAP on analysis of genetic diversity of polyembryonic ramie seedlings. J Hunan Agric Univ (Nat Sci) (湖南农业大学学报?自然科学版), 2011, 37(3): 243–247 (in Chinese with English abstract) [10]Li G, Quiros C F. Sequence-related amplified polymorphisim (SRAP), a new marker system based on a simple PCR reaction: its application to mapping and gene tagging in Brassica. Theor Appl Genet, 2001, 103: 455–461[11]Fang X-J(方宣钧), Wu W-R(吴为人), Tang J-L(唐纪良). DNA Marker Assisted Selection in Crop Breeding (作物DNA标记辅助育种). Beijing: Science Press, 2001. pp 1–9 (in Chinese)[12]Du X-H(杜晓华), Wang D-Y(王得元), Gong Z-H(巩振辉). Development and refinement of a new marker technique restriction site amplified polymorphism (RSAP). J Northwest A&F Univ (Nat Sci Edn)(西北农林科技大学学报?自然科学版), 2006, 34(9): 45–49 (in Chinese with English abstract) [13]Du X-H(杜晓华), Wang D-Y(王得元), Gong Z-H(巩振辉). Estimation and comparison of genetic distances among elite inbred lines in hot pepper (Capsicum annuum L.) by RSAP and SSR. J Northwest A&F Univ (Nat Sci Edn)(西北农林科技大学学报?自然科学版), 2007, 35(7): 97–102 (in Chinese with English abstract) [14]Qiao L-X(乔利仙), Weng M-L(翁曼丽), Kong F-N(孔凡娜), Dai J-X(戴继勋), Wang B(王斌). The application of RSAP marker technique in diversity detection and germplasm identification of porphyra. Period Ocean Univ China (Nat Sci)(中国海洋大学学报?自然科学版), 2007, 37(6): 951–956 (in Chinese with English abstract) [15]Song G-L(宋国立), Cui R-X(崔荣霞), Wang K-B(王坤波), Guo L-P(郭立平), Li S-H(黎绍惠), Wang C-Y(王春英), Zhang X-D(张香娣). A rapid improved CTAB method for extraction of cotton genomic DNA. Acta Gossypii Sin (棉花学报), 1998, 10(5): 273–275 (in Chinese with English abstract)[16]Zhang J(张军), Wu Y-T(武耀廷), Guo W-Z(郭旺珍), Zhang T-Z(张天真). Fast screening of microsatellite markers in cotton with page/silver staining. Acta Gossypii Sin (棉花学报), 2000, 12(5): 267–269 (in Chinese with English abstract)[17]Luan M-B(栾明宝), Chen J-H(陈建华), Xu Y(许英), Wang X-F(王晓飞), Sun Z-M(孙志民). Method of establishing ramie core collection. Acta Agron Sin (作物学报), 2010, 36(12): 2099–2106 (in Chinese with English abstract)[18]Liu L J, Peng D X, Wang B. Genetic relation analysis on ramie [Boehmeria nivea (L.) Gaud.] inbred lines by SRAP markers. Agric Sci China, 2008, 7(8): 944–949 [19]Du X Y, Zhang Q L, Luo Z R. Comparison of four molecular markers for genetic analysis in Diospyros L. (Ebenaceae). Plant Syst Evol, 2009, 281: 171–181[20]Du X-H(杜晓华). Development of RSAP-a Novel DNA Marker Technique and Its Application in Pepper Genetics and Breeding. PhD Dissertation of Northwest A&F University, 2006 (in Chinese with English abstract) [21]Rus-Kortekaas W, Smulders M J M, Arens P, Vosman B. Direct comparison of levels of genetic variation in tomato detected by GACA-containing microsatellite probe and by randomamplified polymorphic DNA. Genome, 1994, 37: 375–381[22]Chen J-H(陈建华), Luan M-B(栾明宝), Xu Y(许英), Wang X-F(王晓飞), Sun Z-M(孙志民), Zou Z-Z(邹自征), Xiong H-P(熊和平). Construction of core germplasm in ramie. Plant Fiber Sci China (中国麻业科学), 2011, 33(2): 59–64 (in Chinese with English abstract) [23]Zhou J-L(周建林), Jie Y-C(揭雨成), Jiang Y-B(蒋彦波), Hu X(胡翔), Zhang J(张健). Genetic relation analysis on ramie cultivars with microsatellite Markers. Acta Agron Sin (作物学报), 2004, 30(3): 289–292 (in Chinese with English abstract)[24]Ye Y-M(叶要妹). Assessment of the germplasm genetic diversity of Zinnia elegans inbred lines detected by RAPDs and ISSRs. J Central South Univ For Technol (中南林业科技大学学报), 2008, 28(4): 36–41 (in Chinese with English abstract) |
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