Welcome to Acta Agronomica Sinica,

Acta Agron Sin ›› 2009, Vol. 35 ›› Issue (12): 2213-2217.doi: 10.3724/SP.J.1006.2009.02213

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Detection of QTL for Resistance to Rice Black-Streaked Dwarf  Disease

PAN Cun-Hong1,2,LI Ai-Hong2,**,CHEN Zong-Xiang1,WU Lin-Bo1,DAI Zheng-Yuan2, HUANG Nian-Sheng2,CHEN Xi-Jun1,ZHANG Ya-Fang1,ZUO Shi-Min1,PAN Xue-Biao1*   

  1. 1Key Laboratory of Plant Functional Genomics of Ministry of Education/Key Laboratory of Crop Genetics and Physiology of Jiangsu Province,Yangzhou University,Yangzhou 225009,China;2Lixiahe Agricultural Research Institute of Jiangsu Province/Nanjing Subcenter of National Rice Improvement Center,Yangzhou 225007,China
  • Received:2009-03-11 Revised:2009-06-25 Online:2009-12-10 Published:2009-09-10
  • Contact: PAN Xue-Biao, E-mail: shuidao@yzu.edu.cn; Tel: 0514-87972136

Abstract:

The rice black-streaked dwarf viral disease (RBSDV), transmitted by the planthopper Laodelphax striatellus Fallèn, was one of the most serious diseases in rice in south China. Breeding of RBSDV resistance variety using marker-assisted selection was effective measure to reduce the disease damage. For achieving this aim, QTL mapping of resistance to RBSDV was studied using a recombinant inbred line (RIL) population from the cross between Zhenshan 97B and Minghui 63. Reactions of 242 RILs to RBSDV were investigated by natural infection method in Agricultural College of Yangzhou University and Lixiahe Agricultural Research Institute, and scored by the incidence of RBSDV. The trait of RBSDV incidence was normally distributed and marked bias towards the resistant parent, which implied that they were controlled by quantitative trait loci. Six QTLs for resistance to RBSDV were detected by WinQTLcart 2.5 software. Two adjacent QTLs were mapped on chromosome 6, two on chromosome 11, one on chromosomes 7 and 9, respectively. Four QTLs on chromosomes 6, 7, and 9 could be detected in two locations, and were stably expressed across the two environments. There had not been any reports about location of QTL for resistance of rice stripe virus and planthopper, which suggested that six QTLs in this study were really resistant to RBSDV. Two QTLs on chromosome 6 were with main effect, and their contributions to the total variation were 20.20% and 18.68% with LOD scores of 12.09 and 9.77 respectively, moreover, they had high value for study on genetics of RBSDV and should be useful in marker-assisted selection for resistance to RBSDV.

Key words: Rice black-streaked dwarf viral disease, Recombinant inbred line population, QTL Analysis

[1] Milne R G, Lovisolo O. Maize rough dwarf and related viruses. Adv Virus Res, 1977, 21: 267-341

[2] Azuhata F, Uyeda I, Kimura I, Shikata E. Close similarity between genome structures of rice black-streaked dwarf and maize rough dwarf viruses. J General Virology, 1993, 74: 1227-1232

[3] Ding X-T(丁新天), Xu J-H(徐加湖), Li D-X(黎东兴), Ding L-L(丁丽玲), Chen Y-T(陈宇腾), Zhang J-Y(章锦杨), Qiu C-H(邱财富). The prevalent reason of rice black-streaked dwarf viral disease and controlling approach in the south mountain of Zhejiang. Chin Agric Sci Bull (中国农学通报), 2003, 19(4): 113-116 (in Chinese)

[4] Chen S-X(陈声祥), Wu H-L(吴惠玲), Liao X-G(廖璇刚), Lü Y-P(吕永平), Shen S-F(沈升法), Wang O-F(王藕芳), Jin M-S(金梅松). The prevalent reason of rice black-streaked dwarf viral disease in the middle of Zhejiang. Zhejiang Agric Sci (浙江农业科学), 2000, (6): 287-289 (in Chinese)

[5] Qiu G-C(仇广灿), Cheng X-S(成晓松), Hu J(胡键), Wu C-Q(吴彩全), Cao X-L(曹晓利). Epidemics characteristic of rice black-streaked dwarf viral disease and its controlling method. Barley & Cereal Sci (大麦与谷类科学), 2008, 3(2): 51-53 (in Chinese)

[6] Wang H-D(王华弟), Zhu Z-R(祝增荣), Chen J-P(陈剑平), Wang E-G(汪恩国), Li B-F(李宝福). Epidemics, monitoring and key control techniques of the rice black-streaked dwarf viral disease. Acta Agric Zhejiangensis (浙江农业学报), 2007, 19(3): 141-146 (in Chinese with English abstract)

[7] Li A-H(李爱宏), Dai Z-Y(戴正元), Ji H-J(季红娟), Zhang X-X(张小祥), Li Y-H(李育红), Pan C-H(潘存红), Zhang H-X(张洪熙), Pan X-B(潘学彪). Preliminary analysis on resistance of rice black-streaked dwarf viral disease for germplasms with different gene-types. J Yangzhou Univ (Agric & Life Sci Edn)(扬州大学学报·农业与生命科学版), 2008, 29(3): 18-22(in Chinese with English abstract)

[8] Xing Y-Z(邢永忠), Tan Y-F(谈移芳), Xu G-C(徐才国), Hua J-P(华金平), Sun X-L(孙新立). Mapping quantitative trait loci for grain appearance traits of rice using a recombinant inbred line population. Acta Bot Sin (植物学报), 2001, 43(8): 840-845 (in Chinese with English abstract)

[9] Lü Y-P(吕永平), Lei J-L(雷娟利), Jin D-D(金登迪), Chen S-X(陈声祥). Detect RBSDV with RT-PCR. Acta Agric Zhejiangensis (浙江农业学报), 2002, 14(2): 117-119 (in Chinese)

[10] Wang S C, Zeng Z B. Windows QTL Cartographer 2.0 Department of Statistics. North Carolina State University, Raleigh, NC, 2001-2004. http://statgen.ncsu.edu/qtlcart/WQTLCart.html

[11] Sun D Z, Jiang L, Liu S J, Zhang Y X, Huang P H, Cheng X N, Zhai H Q, Wan J M. Detection of QTLs for resistance to rice stripe virus and small brown planthopper in rice (Oryza sativa L.). Acta Agron Sin (作物学报), 2006, 32(6): 805-810

[12] Yamasaki M, Tsuenmatu H, Yoshimura A, Iwata N, Yasui H. Quantitative trait locus mapping of ovicidal response in rice (Oryza sativa L.) against whitebacked planthopper (Sogatella furcifera Horvath). Crop Sci, 1999, 39: 1178-1183

[13] Wang C M, Yasui H, Yoshimura A, Zhai H Q, Wan J M. Inheritance and QTL mapping of antibiosis to green leafhopper in rice. Crop Sci, 2004, 44: 389-393

[14] Yasui H, Yoshimura A. QTL mapping of antibiosis to green leafhopper, Nephotettix virescens distant and green rice leafhopper, Nephotettix cincticeps Uhler in rice, Oryza sativa L. Rice Genet Newsl, 1999, 16: 96-98

[15] Rahman M L, Chu S H, Qiao Y L, Jiang W Z, Khanam M S, Jena K K, Koh H J. Genetic analysis and high-resolution mapping of two rice brown planthopper resistant genes, BPH20(t) and BPH21(t) from Oryza Minuta. In: Plant & Animal Genomes XVI Conference, San Diego, CA: Scherago International, Inc., 2008. 237

[16] Kawaguchi M, Murata K, Ishii T, Takumi S, Mori N, Nakamura C. Assignment of a brown planthopper (Nilaparvata lugens Stal) resistance gene bph4 to the rice chromosome 6. Breed Sci, 2001, 51: 13-18

[17] McCouch S R, Khush G S, Tanksley S D. Tagging genes for disease and insect resistance via linkage to RFLP markers. In: Rice Genetics II. Proc 2nd Int Rice Genet Symp. Manila: IRRI, 1991. pp 443-449

[18] Su C-C(苏昌潮). Analysis of Germplasm Resistant to Brown Planthopper (Nilaparvata lugens Stal) and Molecular Mapping of BPH Resistant Gene in Rice (Oryza sativa L.). PhD Dissertation of Nanjing Agricultural University, 2003. pp 48-53 (in Chinese with English abstract)

[19] Hayano-Saito Y, Saito K, Nakamura S, Kawasaki S, Iwasaki M. Fine physical mapping of the rice stripe resistance gene locus, Stvb-i. Theor Appl Genet, 2000, 101: 69-63

[20] Ding X-L(丁秀兰), Jiang L(江玲), Liu S-J(刘世家), Wang C-M(王春明), Chen L-M(陈亮明), Cheng Z-B(程兆榜), Fan Y-J(范永坚), Zhou Y-J(周益军), Wan J-M(万建民). Using recombinant inbred lines (RILs) derived from crossing of Kinmaze and DV 85. Acta Genet Sin (遗传学报), 2004, 31(3): 287-292 (in Chinese with English abstract)

[21] Maeda H, Nemoto H, Yagi T. QTL analysis for stripe disease resistance using recombinant inbred lines derived from crossing between Milyang and Akihikare. In: Prospects of Rice Genetics and Breeding for the 21st Century-Paper Collection of International Rice Genetics and Breeding Symposium. Beijing: China Agricultural Science and Technology Press, 1999. pp 53-57
Sun D-Z(孙黛珍), Jiang L(江玲), Zhang Y-X(张迎信), Cheng X-N(程遐年), Zhai H-Q(翟虎渠), Wan J-M(万建民). Analysis of quantitative trait loci for resistance to stripe disease in rice. Chin J Rice Sci (中国水稻科学), 2007, 21(1): 95-98 (in Chinese with English abstract)
[1] LUO Lan, LEI Li-Xia, LIU Jin, ZHANG Rui-Hua, JIN Gui-Xiu, CUI Di, LI Mao-Mao, MA Xiao-Ding, ZHAO Zheng-Wu, HAN Long-Zhi. Mapping QTLs for yield-related traits using chromosome segment substitution lines of Dongxiang common wild rice (Oryza rufipogon Griff.) and Nipponbare (Oryza sativa L.) [J]. Acta Agronomica Sinica, 2021, 47(7): 1391-1401.
[2] LIU Jiang-Ning,WANG Chu-Xin,ZHANG Hong-GEN,MIAO Yi-Xu,GAO Hai-Lin,XU Zuo-Peng,LIU Qiao-Quan,TANG Shu-Zhu. Mapping of QTLs for resistance to rice black-streaked dwarf disease [J]. Acta Agronomica Sinica, 2019, 45(11): 1664-1671.
[3] ZHANG Ling,LI Xiao-Nan,WANG Wei,YANG Sheng-Long,LI Qing,WANG Jia-Yu. Analysis of QTLs for Plant Type Traits in Rice (Oryza sativa) [J]. Acta Agron Sin, 2014, 40(12): 2128-2135.
[4] WU Ya-Hui,TAO Xing-Xing,XIAO Wu-Ming,GUO Tao,LIU Yong-Zhu,WANG Hui,CHEN Zhi-Qiang. Dissection of QTLs for Panicle Traits in Rice (Oryza sativa) [J]. Acta Agron Sin, 2014, 40(02): 214-221.
[5] FAN Dong-Mei,MA Zhan-Zhou,LIU Chun-Yan,YANG Zhe,ZENG Qing-Li,XIN Da-Wei,JIANG Hong-Wei,QIU Peng-Cheng,CHEN Qing-Shan,HU Guo-Hua. Analysis of Related Interactions and Mapping of QTLs for Seed Weight per Plant in Soybean in Different Years [J]. Acta Agron Sin, 2013, 39(06): 1021-1029.
[6] ZHANG Wei-Qiang,KU Li-Xia,ZHANG Jun,HAN Zan-Ping,CHEN Yan-Hui. QTL Analysis of Kernel Ratio, Kernel Depth and 100-Kernel Weight in Maize (Zea mays L.) [J]. Acta Agron Sin, 2013, 39(03): 455-463.
[7] FENG Yue, ZAI Rong-Rong, CAO Li-Yong, LIN Ze-Chuan, WEI Xin-Hua, CHENG Shi-Hua. QTL Analysis for Plant Height and Heading Date in Rice under Two Nitrogen Levels [J]. Acta Agron Sin, 2011, 37(09): 1525-1532.
[8] PENG Bo, WANG Yang, LI Yong-Xiang, LIU Cheng, ZHANG Yan, LIU Zhi-Zhai, TAN Wei-Wei, WANG Di, SUN Bao-Cheng, DAN Yun-Su, SONG Yan-Chun, WANG Tian-Yu, LI Yu. Correlation Analysis and Conditional QTL Analysis of Grain Yield and Yield Components in Maize [J]. Acta Agron Sin, 2010, 36(10): 1624-1633.
[9] YIN Zhi-Tong,SONG Hai-Na,MENG Fan-Fan,XU Xiao-Ming,YU De-Yue. QTL Mapping for Photosynthetic Gas-Exchange Parameters in Soybean [J]. Acta Agron Sin, 2010, 36(1): 92-100.
[10] MIAO Xin-Fen, ZHU Ming-Xi, XU Wen-Ping, DING Jun-Jie, YU Feng-Yao, YU Yong-Mei, DU Sheng-Wei, LIU Chun-Yan, CHEN Qiang-Shan, HU Guo-Hua. QTL Analysis of Fatty acids Contents in Soybean [J]. Acta Agron Sin, 2010, 36(09): 1498-1505.
[11] ZHOU Rong,CHEN Hai-Feng,WANG Xian-Zhi,ZHANG Xiao-JUan,SHAN Zhi-Hui,et al.. QTL Analysis of Yield,Yield Components and Lodging in Soybean [J]. Acta Agron Sin, 2009, 35(5): 821-830.
[12] XIAO Bing-Guang;LU Xiu-Ping;JIAO Fang-Chan;LI Yong-Ping;SUN Yu-He;GUO Zhao-Kui. Preliminary QTL Analysis of Several Chemical Components in Flue- Cured Tobacco (Nicotiana tabacum L.) [J]. Acta Agron Sin, 2008, 34(10): 1762-1769.
[13] HUANG Zhong-Wen;ZHAO Tuan-Jie;YU De-Yue;CHEN Shou-Yi;GAI Jun-Yi. Correlation and QTL Mapping of Biomass Accumulation, Apparent Har-vest Index, and Yield in Soybean [J]. Acta Agron Sin, 2008, 34(06): 944-951.
[14] JI Su-Lan;JIANG Ling;WANG Yi-Hua;LIU Shi-Jia;LIU Xi;ZHAI Hu-Qu;YOSHIMURA Atsushi;WAN Jian-Min. QTL and Epistasis for Low Temperature Germinability in Rice [J]. Acta Agron Sin, 2008, 34(04): 551-556.
[15] HUANG Zhong-Wen;ZHAO Tuan-Jie;YU De-Yue;CHEN Shou-Yi;GAI Jun-Yi. Lodging Resistance Indices and Related QTLs in Soybean [J]. Acta Agron Sin, 2008, 34(04): 605-611.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!