Welcome to Acta Agronomica Sinica,

Acta Agron Sin ›› 2010, Vol. 36 ›› Issue (05): 810-817.doi: 10.3724/SP.J.1006.2010.00810

• TILLAGE & CULTIVATION · PHYSIOLOGY & BIOCHEMISTRY • Previous Articles     Next Articles

Quantitative Analysis on Root Morphological Characteristics Based on Image Analysis Method in Rice

GU Dong-Xiang,TANG Liang,CAO Wei-Xing,ZHU Yan*   

  1. Jiangsu Key Laboratory for Information Agriculture/Nanjing Agricultural University,Nanjing 210095,China
  • Received:2009-10-26 Revised:2010-02-06 Online:2010-05-12 Published:2010-03-15
  • Contact: ZHU Yang,E-mail:yanzhu@njau.edu.cn

Abstract:

The objective of this study was to quantitatively analyze the change patterns of rice root morphological characteristics based on image analysis method in pot experiments with different nitrogen rates, water regimes, and rice cultivars in different years. WinRhizo software (WR) was used as the root image analysis tool, and two modes of LM and T200 were used to measure the root diameter and adventitious root length under two ranges of root diameter as 0–0.30 mm and 0.25–1.80 mm, respectively. The measurement results from WR were compared with those from Image-Pro Plus 6.0 software (IP). Then, the diameter ranges of different types of root were determined. On the basis of the dataset from WR, the statistical analysis were performed on rice root morphological characteristic indices, including dry weight, total volume, total surface area, total adventitious root length and number per plant at different growth stages. The results were as follows: (1) The average NRMSEs between WR (LM and T200) and IP for root diameters were 5.44% and 10.95%. (2) The diameter range of fine lateral root was circumscribed within 0.03–0.10 mm for all the experiments, coarse lateral and adventitious root were circumscribed within 0.10-0.30 and 0.30-1.40 mm for V1 (Nipponbare) and V2 (Wuxiangjing 14), but 0.10–0.25 and 0.25–1.65 mm for V3 (Yangdao 6). Following this method, the NRMSEs for adventitious root length measured by WR and IP were 10.78%–12.01%. (3) All indices increased rapidly in the growth process and reached or approached the maximum at heading, then increased slowly or decreased after heading. There were significant differences between treatments with different nitrogen rates from tillering to maturing on all indices. Increasing nitrogen rate accelerated the growth of roots, and especially enhanced the proportion of adventitious roots. Properly control of irrigation could promote the growth of roots and increase the proportion of lateral roots. All indices of V3 were significantly higher than these of other cultivars, and there were no significant differences between V1 and V2. The results indicated that it was feasible to measure morphological indices of different types of rice root by WR with different modes, and the methods used in this paper have a good accuracy and reliability. These results could provide a support for the quantitative analysis on root morphology of rice or other crops.

Key words: Rice, Root morphology, Quantitative analysis, WinRhizo, Image analysis



[15] Fan X-L(樊小林), Shi Z-J(史正军), Wu P(吴平). Effects of nitrogen fertilizer on parameters of rice (Oryza sativa L.) root architecture and their genotypic difference. J Northwest Sci-Tech Univ Agric & For (Nat Sci Edn)(西北农林科技大学学报·自然科学版), 2002, 30(2): 1–5 (in Chinese with English abstract)
[1] Hu Zhao, Qian Run, Xie Feng-Pu, Ying Su-Ping. Genome-wide identification and expression analysis of the SPX gene family in rice under phosphorus treatment [J]. Acta Agronomica Sinica, 2026, 52(6): 1902-1912.
[2] Zou Yi-Mei, Xu Min, Wang Hai-Yang, Yao Hui, Wang Jia-Feng, Liu Hao, Ren Dai-Sheng. Analysis of transcription factor regulatory networks in two-line male sterile rice seedling roots in response to salt stress [J]. Acta Agronomica Sinica, 2026, 52(6): 1728-1742.
[3] Yan An, Jiang Kun-Wei, Wang Rong-Yuan, Tian Lin, Zhang Lu, Wang Yun, Xu Jian-Long. Identification and cloning of SVN7 controlling small vascular bundle number in the rice flag leaf [J]. Acta Agronomica Sinica, 2026, 52(5): 1364-1372.
[4] Guo Xing-Yu, Hu Dan, Lin Su-Qi, Wang Meng-Kai, Tan Wen-Feng, Huang Chuan-Qin. Biochar combined with chemical fertilizer increases maize yield and soil ecosystem multifunctionality in an intercropped maize-soybean [J]. Acta Agronomica Sinica, 2026, 52(5): 1536-1547.
[5] Chen Wei, Wei Wan-Juan, Zhao Qi-Bing, Chang Dong-Wei, Yu Ling-Bo, Zhai Peng-Fei, Feng Zhi-Ming, Chen Zong-Xiang, Ren Yang-Tao, Yang Peng, Liu Hai-Lang, Li Zhen-Fu, Yang Yong-Le, Jin Yan-Gang, Zuo Shi-Min. Developing new germplasm of high-quality and early-maturing rice by editing Hd6 via CRISPR/Cas9 [J]. Acta Agronomica Sinica, 2026, 52(4): 1046-1056.
[6] Shi Shao-Jie, Liu Kai, Chen Zi-Yi, Wang Hui-Ying, Li San-He, Zhou Lei, You Ai-Qing. Cloning and functional analysis of the dwarf and multi-tiller gene DMT1 in rice [J]. Acta Agronomica Sinica, 2026, 52(4): 1022-1034.
[7] Liu Chang-You, Wang Shen, Shi Hui-Ying, Shen Ying-Chao, Sun Lei, Wang Yan, Zhang Zhi-Xiao, Su Qiu-Zhu, Tian Jing, Fan Bao-Jie. QTL mapping for bruchid resistance in an adzuki bean distant hybridization population using rice bean genetic resources [J]. Acta Agronomica Sinica, 2026, 52(3): 936-944.
[8] Ye Fan, Li Shuai, Li Si-Yu, Chen Yun, Dou Chao-Yin, Liu Li-Jun. Effects of water-saving irrigation on rice yield and population quality in Northeast China [J]. Acta Agronomica Sinica, 2026, 52(3): 895-907.
[9] Liu Ning, Fan Ping, Wang Cheng, Chen Qi-Qi, Cheng Qing-Yue, Tie Xia-Na, Tang Jing-Sha, Liu Bin-Bin, Xie Hong-Kun, Wang Jia-Yue, Shi Yuan-Qing, Ma Jun. Effects of reduced nitrogen application combined with organic fertilizer on yield formation and nitrogen utilization in mechanically transplanted rice [J]. Acta Agronomica Sinica, 2026, 52(3): 866-880.
[10] Qin Yi-Yan, Fu Yao, Su Chang, Li Na, Xu Jing-Ru, Cheng Xiao-Ran, Zhang Qi, Zhao Ming-Hui. Functional analysis of OsST41 regulating salt tolerance in rice seedlings [J]. Acta Agronomica Sinica, 2026, 52(3): 802-812.
[11] Zhu Jin-Juan, Wang Hui-Ping, Yang Guo-Dong, Wang Yu-Cheng, Yang Chen, Wang Bin, Agustiani Nurwulan, Tu Jun-Ming, Bi Jun-Guo, Cui Ke-Hui, Huang Jian-Liang, Peng Shao-Bing, Yuan Shen. Effects of water management and variety type on grain yield and quality in ratoon rice [J]. Acta Agronomica Sinica, 2026, 52(1): 295-315.
[12] WANG Chan, WU Ying-Ying, LI Wen-Qi, LI Xia, WANG Fang-Quan, ZHOU Tong, YANG Jie. Development of functional markers of rice stripe disease resistance gene STV11 based on HRM technique [J]. Acta Agronomica Sinica, 2025, 51(9): 2547-2556.
[13] GUO Bao-Wei, WANG Wang, WANG Kai, WANG Yan, ZENG Xin, JING Xiu, WANG Jing, NI Xin-Hua, XU Ke, ZHANG Hong-Cheng. Population dynamic characteristics and formation mechanisms of super high-yielding of two types of glutinous rice in the middle and lower reaches of the Yangtze Rive [J]. Acta Agronomica Sinica, 2025, 51(9): 2433-2453.
[14] CHEN Hui-Ying, HE Jia-Xin, ZHU Bin, HUANG Shi-Xuan, ZHOU Xing-You, WU Jun-Quan, YANG Mei-Yan. Whole genome analysis and biological characterization of phage vB_XaS_ HDB2 infected with Xanthomonas oryzae pv. oryzae [J]. Acta Agronomica Sinica, 2025, 51(8): 2087-2099.
[15] CAI Jin-Shan, LI Chao-Nan, WANG Jing-Yi, LI Ning, LIU Yu-Ping, JING Rui-Lian, LI Long, SUN Dai-Zhen. Genome-wide association study of root traits in wheat seedlings and identification of a superior allele at TaSRL-3B [J]. Acta Agronomica Sinica, 2025, 51(8): 2020-2032.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!