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Acta Agron Sin ›› 2010, Vol. 36 ›› Issue (1): 115-120.doi: 10.3724/SP.J.1006.2010.00115

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Identification of Quantitative Trait Loci for Alkali Digestion Value in Japonica Rice

LI Mao-Mao1,2,3,XU Lei1,REN Jun-Fang1,CAO Gui-Lan1,YU Li-Qin3,HE Hao-Hua2,*,HAN Long-Zhi1*,KOH Heejong4   

  1. 1Insitute of Crop Sciences,Chinese Academy of Agricultural Sciences/The National Key Facility for Crop Gene Resources and Genetic Improvement/Key Laboratory of Crop Germplasm Resources and Biotechnology,Ministry of Agriculture,Beijing100081,china;2College of Agronmy,Jiangxi Agricultural University, Nanchang 330045,China;3Rice Research Institute ,Jiangxi Academy of Agricultural Sciences,Nanchang 330200,China;4School of Plant Science,College of Agriculture and Life Science,Seoul National University,Seoul 151-921,Korea  
  • Received:2009-06-30 Revised:2009-09-02 Online:2010-01-12 Published:2009-11-17
  • Contact: HAN Ling-Zhi, E-mail: lzhan58@yahoo.com.cn; Tel & Fax: 010-62176784; 贺浩华, E-mail: hhhua64@163.com

Abstract:

Using an F2 population including 200 individuals derived from a cross combination between two japonica rice DL115 with large grain and XL005 with small grain, which were significantly different on alkali digestion value (ADV), the quantitative trait loci for ADV were identified by composite interval mapping with SSR markers.The results showed that ADV exhibited a normal continuous distribution in F2 population, indicating that ADV is a quantitative trait controlled by multiple genes. A total of three QTLs conferring ADV were detected in intervals of RM14870RM1284, RM3838RM3351, and RM1812RM332 on chromosomes 3, 5, and 11, and explained 6.5%, 10.3% and 8.1% of the observed phenotypic variance, respectively. The allele of qADV5 was derived from XL005 with less ADV, and the alleles of qADV3 and qADV11 were derived from DL115 with bigger ADV. The gene action was controlled by dominance and over-dominance.

Key words: Japonica rice, Alkali digestion value(ADV), SSR Marker, Quantitative Traits locus

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