Welcome to Acta Agronomica Sinica，

Acta Agron Sin ›› 2011, Vol. 37 ›› Issue (09): 1511-1524.doi: 10.3724/SP.J.1006.2011.01511

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

QTL Mapping for Yield Related Traits Using Two Associated RIL Populations of Wheat

DING An-Ming1,LI Jun1,CUI Fa1,ZHAO Chun-Hua1,MA Hang-Yun2,WANG Hong-Gang1,*   

  1. 1 State Key Laboratory of Crop Biology / Shandong Key Laboratory of Crop Biology / Tai’an Subcenter of National Wheat Improvement Center / Agronomy College, Shandong Agricultural University, Tai’an 271018, China; 2 Zaozhuang Municipal Academy of Agricultural Sciences, Zaozhuang 277100, China
  • Received:2011-01-14 Revised:2011-05-20 Online:2011-09-12 Published:2011-06-28
  • Contact: 王洪刚, E-mail: hgwang@sdau.edu.cn, Tel: 0538-8242141

PDF

1841

Cited

14

Abstract: Using inclusive composite interval mapping (ICIM) method, we detected QTLs responsible for spikelet number per spike (SN), grain number per spike (GN), spike number per plant (PN), 1000-grain weight (GW), and grain yield per plant (GY) in associated RIL populations WY (229 lines) and WJ (485 lines), which were planted in four growing environments. Numerous QTLs for the five yield-related traits were located on 21 chromosomes of wheat. In the WY population, nine, nine, four, seven, and five QTLs were detected for SN, GN, PN, GW, and GY, respectively. Among these QTLs, 16 explained more than 10% of the phenotypic variations. In the WJ population, the numbers of QTLs for the above five traits were 20, 16, 11, 14, and 9, respectively, of which only three QTLs had phenotypic contribution higher than 10%. In addition, five QTLs were identified in two environments in the WY population and 17 QTLs were identified in at least two environments in the WJ population. Pleiotropy phenomenon or chromosome regions with closely linked QTLs were observed in both populations. Nine pairs of QTLs and two chromosome regions were inferred to be identical between the two populations because these QTLs and chromosome regions shared the same flanking markers. These results may enrich the QTL information for yield components of wheat and facilitate marker assisted selection.

Key words: Wheat, Yield-related traits, Inclusive composite interval mapping method (ICIM), QTL

[1]Li S S, Jia J Z, Wei X Y, Zhang X C, Li L Z, Chen H M, Fan Y D, Sun H Y, Zhao X H, Lei T D, Xu Y F, Jiang F S, Wang H G, Li L H. An intervaietal genetic map and QTL analysis for yield traits in wheat. Mol Breed, 2007, 20: 167–178
[2]Kuchel H, Williams K J, Langridge P, Eagles H A, Jefferies S P. Genetic dissection of grain yield in bread wheat: I. QTL analysis. Theor Appl Genet, 2007, 115: 1029–1041
[3]Yao Q(姚琴), Zhou R-H(周荣华), Pan Y-M(潘昱名), Fu T-H(傅体华), Jia J-Z(贾继增). Construction of genetic linkage map and QTL analysis of agronomic important traits based on a RIL population derived from common wheat variety Yanzhan 1 and Zaosui 30. Sci Agric Sin (中国农业科学), 2010, 43(20): 4130–4139 (in Chinese with English abstract)
[4]Wang R-X(王瑞霞), Zhang X-Y(张秀英), Wu L(伍玲), Wang R(王瑞), Hai L(海林), Yan C-S(闫长生), You G-X(游光霞), Xiao S-H(肖世和). QTL mapping for grain filling rate and thousand-grain weight in different ecological environments in wheat. Acta Agron Sin (作物学报), 2008, 34(10): 1750-1756 (in Chinese with English abstract)
[5]Börner A, Schumann E, Fürste A, Cöster H, Leithod B, Röder M S, Weber W E. Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat (Ttiticum astivum L.). Theor Appl Genet, 2002, 105: 921–936
[6]Kumar N, Kulwal P L, Balyan H S, Gupta P K. QTL mapping for yield and yield contributing traits in 2 mapping population of bread wheat. Mol Breed, 2007, 19: 163–177
[7]Simon M, Loudet O, Durand S, Berard A, Brunel D, Sennesal F X, Durand-Tardif M, Pelletier G, Camilleri C. Quantitative trait loci mapping in five new large recombinant inbred line populations of Arabidopsis thaliana genotyped with consensus single-nucleotide polymorphism markers. Genet Soc Am, 2008, 178: 2253–2264
[8]O’Neill C M, Morgan C, Kirby J, Tscheop H, Deng P X, Brennan M, Rosas U, Fraser F, Hall C, Gill S, Bancroft I. Six new recombinant inbred populations for the study of quantitative traits in Arabidopsis thaliana. Theor Appl Genet, 2008, 116: 623–634
[9]Murray M G, Thompson W F. Rapid isolation of high-molecular weight plant DNA. Nucl Acids Res, 1980, 8: 4321–4325
[10]Cui F, Li J, Ding A M, Zhao C H, Wang L, Wang X Q, Li S S, Bao Y G, Li X F, Feng D S, Kong L R, Wang H G. Conditional QTL mapping for plant height with respect to the length of the spike and internode in two mapping populations of wheat. Theor Appl Genet, 2011, DOI: 10.1007/s00122-011-1551-6
[11]Li H H, Ye GY, Wang J K. A Modified Algorithm for the Improvement of Composite Interval Mapping. Genet Soc Am, 2007, 175: 361–374
[12]Austin D F, Lee M. Comparative mapping in F2:3 and F6:7 generations of quantitative trait loci for grain yield and yield components in maize. Theor Appl Genet, 1996, 92: 817–826
[13]Yano M, Sasaki T. Genetic and molecular dissection of quantitative traits in rice. Plant Mol Biol, 1997, 35: 145–153
[14]Mackay T F C. The genetic architecture of quantitative traits. Annu Rev Genet, 2001, 35: 303–339
[15]Vales M I, Schon C C, Capettini F, Chen X M, Corey A E, Mather D E, Mundt C C, Richardson K L, Sandoval-Islas J S, Utz H F, Hayes P M. Effect of population size on the estimation of QTL: a test using resistance to barley stripe rust. Theor Appl Genet, 2005, 111: 1260–1270
[16]Wang R X, Hai L, Zhang X Y, You G X, Yan C X, Xiao S H. QTL mapping for grain filling rate and yield related traits in RILs of the Chinese winter wheat population Heshangmai × Yu 8679. Theor Appl Genet, 2009, 118: 313–325
[17]Huang X Q, Kempf H, Canal M W, Roder M S. Advanced backcross QTL analysis in progenies derived from a cross between a German elite winter wheat variety and a synthetic wheat (Triticun aestivum L.). Theor Appl Genet, 2004, 109: 933–943
[18]Kato K, Miura H, Sawada S. Mapping QTLs controlling grain yield and its components on chromosome 5A of wheat. Theor Appl Genet, 2000, 101: 1114–1121
[19]Paterson A H, Damon S, Hewitt J D, Zamir D, Rabinowitch H D, Lincoln S E, Lander E S, Tanksley S D. Mendelian factors underlying quantitative traits in tomato: comparison across species, generations, and environments. Genet Soc Am, 1991, 127: 181–197
[20]Varshney R K, Prasad M, Roy J K, Kumar N H S, Dhaliwal H S, Balyan H S, Gupta P K. Identification of eight chromosomes and a microsatellite maker on 1AS associated with QTL for grain weight in bread wheat. Theor Appl Genet, 2000, 100: 1290–1294
[21]Huang X Q, Coster H, Ganal M W, Roder M S. Advanced backcross QTL analysis for identification of quantitative trait loci alleles from wild relatives of wheat (Triticun aestivum L.). Theor Appl Genet, 2003, 106: 1379–1389
[22]Huang X Q, Cloutier S, Lycar L, Radovanovic N, Humpphreys D G, Noll J S, Somers D J, Brown P D. Molecular detection of QTLs for agronomic and quality traits in a double haploid population derived from two Canadian wheats (Triticun aestivum L.). Theor Appl Genet, 2006, 113: 753–766
[23]Kumar N, Kulwal P L, Gaur A, Tyagi A K, Khurana J P, Khurana P. QTL analysis for grain weight in common wheat. Euphytica, 2006, 151: 135–144
[24]Quarrie S A, Steed A, Calestani C, Semikhodskii A, Lebreton C, Chinoy C, Steele N, Pljevljakusic D, Waterman E, Weyen J, Schondelmaier J, Habash D Z, Farmer P, Saker L, Clarkson D T, Abugalieva A, Yessimbekova M, Turuspekov Y, Abugalieva S, Tuberrosa R, Sanguineti M C, Hollington P A, Aragues R, Royo A, Dodig D. A high-density genetic map of hexaploid wheat (Triticun aestivum L.) from the cross Chinese Spring × SQ1 and its use to compare QTLs for grain yield across a range of environments. Theor Appl Genet, 2005, 110: 865–880
[25]Liao X-Z(廖祥政), Wang J(王瑾), Zhou R-H(周荣华), Ren Z-L(任正隆), Jia J-Z(贾继增). Mining favorable alleles of QTLs conferring 1000-grain weight from synthetic wheat. Acta Agron Sin (作物学报), 2008, 34(11): 1877–1884 (in Chinese with English abstract)
[26]Ramya P, Chaubal A, Kulkrani K, Gupta L, Kadoo N, Dhaliwal H S, Chhuneja P, Lagu M, Gupta V. QTL mapping of 1000-kernal weight, kernel length, and kernel width in bread wheat (Triticum aestivum L.). J Appl Genet, 2001, 51: 421–429
[27]Kirigei F M, Ginkel M V, Brown-Guedira G, Gill B S, Paulsen G N, Fritz A K. Makers associated with a QTL for grain yield in wheat under drought. Mol Breed, 2007, 20: 401–413
[29]Song Y-X(宋彦霞), Jing R-L(景蕊莲), Huo N-X(霍纳新), Ren Z-L(任正隆), Jia J-Z(贾继增). Detection of QTLs for heading in common wheat using different populations. Sci Agric Sin (中国农业科学), 2006, 39(11): 2186–2193 (in Chinese with English abstract)
[1] HU Wen-Jing, LI Dong-Sheng, YI Xin, ZHANG Chun-Mei, ZHANG Yong. Molecular mapping and validation of quantitative trait loci for spike-related traits and plant height in wheat [J]. Acta Agronomica Sinica, 2022, 48(6): 1346-1356.
[2] GUO Xing-Yu, LIU Peng-Zhao, WANG Rui, WANG Xiao-Li, LI Jun. Response of winter wheat yield, nitrogen use efficiency and soil nitrogen balance to rainfall types and nitrogen application rate in dryland [J]. Acta Agronomica Sinica, 2022, 48(5): 1262-1272.
[3] YU Chun-Miao, ZHANG Yong, WANG Hao-Rang, YANG Xing-Yong, DONG Quan-Zhong, XUE Hong, ZHANG Ming-Ming, LI Wei-Wei, WANG Lei, HU Kai-Feng, GU Yong-Zhe, QIU Li-Juan. Construction of a high density genetic map between cultivated and semi-wild soybeans and identification of QTLs for plant height [J]. Acta Agronomica Sinica, 2022, 48(5): 1091-1102.
[4] LEI Xin-Hui, WAN Chen-Xi, TAO Jin-Cai, LENG Jia-Jun, WU Yi-Xin, WANG Jia-Le, WANG Peng-Ke, YANG Qing-Hua, FENG Bai-Li, GAO Jin-Feng. Effects of soaking seeds with MT and EBR on germination and seedling growth in buckwheat under salt stress [J]. Acta Agronomica Sinica, 2022, 48(5): 1210-1221.
[5] FU Mei-Yu, XIONG Hong-Chun, ZHOU Chun-Yun, GUO Hui-Jun, XIE Yong-Dun, ZHAO Lin-Shu, GU Jia-Yu, ZHAO Shi-Rong, DING Yu-Ping, XU Yan-Hao, LIU Lu-Xiang. Genetic analysis of wheat dwarf mutant je0098 and molecular mapping of dwarfing gene [J]. Acta Agronomica Sinica, 2022, 48(3): 580-589.
[6] FENG Jian-Chao, XU Bei-Ming, JIANG Xue-Li, HU Hai-Zhou, MA Ying, WANG Chen-Yang, WANG Yong-Hua, MA Dong-Yun. Distribution of phenolic compounds and antioxidant activities in layered grinding wheat flour and the regulation effect of nitrogen fertilizer application [J]. Acta Agronomica Sinica, 2022, 48(3): 704-715.
[7] LIU Yun-Jing, ZHENG Fei-Na, ZHANG Xiu, CHU Jin-Peng, YU Hai-Tao, DAI Xing-Long, HE Ming-Rong. Effects of wide range sowing on grain yield, quality, and nitrogen use of strong gluten wheat [J]. Acta Agronomica Sinica, 2022, 48(3): 716-725.
[8] XU Long-Long, YIN Wen, HU Fa-Long, FAN Hong, FAN Zhi-Long, ZHAO Cai, YU Ai-Zhong, CHAI Qiang. Effect of water and nitrogen reduction on main photosynthetic physiological parameters of film-mulched maize no-tillage rotation wheat [J]. Acta Agronomica Sinica, 2022, 48(2): 437-447.
[9] HUANG Li, CHEN Yu-Ning, LUO Huai-Yong, ZHOU Xiao-Jing, LIU Nian, CHEN Wei-Gang, LEI Yong, LIAO Bo-Shou, JIANG Hui-Fang. Advances of QTL mapping for seed size related traits in peanut [J]. Acta Agronomica Sinica, 2022, 48(2): 280-291.
[10] ZHANG Yan-Bo, WANG Yuan, FENG Gan-Yu, DUAN Hui-Rong, LIU Hai-Ying. QTLs analysis of oil and three main fatty acid contents in cottonseeds [J]. Acta Agronomica Sinica, 2022, 48(2): 380-395.
[11] YAN Yan, ZHANG Yu-Shi, LIU Chu-Rong, REN Dan-Yang, LIU Hong-Run, LIU Xue-Qing, ZHANG Ming-Cai, LI Zhao-Hu. Variety matching and resource use efficiency of the winter wheat-summer maize “double late” cropping system [J]. Acta Agronomica Sinica, 2022, 48(2): 423-436.
[12] WANG Yang-Yang, HE Li, REN De-Chao, DUAN Jian-Zhao, HU Xin, LIU Wan-Dai, GU Tian-Cai, WANG Yong-Hua, FENG Wei. Evaluations of winter wheat late frost damage under different water based on principal component-cluster analysis [J]. Acta Agronomica Sinica, 2022, 48(2): 448-462.
[13] CHEN Xin-Yi, SONG Yu-Hang, ZHANG Meng-Han, LI Xiao-Yan, LI Hua, WANG Yue-Xia, QI Xue-Li. Effects of water deficit on physiology and biochemistry of seedlings of different wheat varieties and the alleviation effect of exogenous application of 5-aminolevulinic acid [J]. Acta Agronomica Sinica, 2022, 48(2): 478-487.
[14] MA Bo-Wen, LI Qing, CAI Jian, ZHOU Qin, HUANG Mei, DAI Ting-Bo, WANG Xiao, JIANG Dong. Physiological mechanisms of pre-anthesis waterlogging priming on waterlogging stress tolerance under post-anthesis in wheat [J]. Acta Agronomica Sinica, 2022, 48(1): 151-164.
[15] MENG Ying, XING Lei-Lei, CAO Xiao-Hong, GUO Guang-Yan, CHAI Jian-Fang, BEI Cai-Li. Cloning of Ta4CL1 and its function in promoting plant growth and lignin deposition in transgenic Arabidopsis plants [J]. Acta Agronomica Sinica, 2022, 48(1): 63-75.
Viewed
Full text


Abstract

Cited
  Shared   
  Discussed   
No Suggested Reading articles found!
Add: No. 80 Xueyuan South Rd, Beijing 100081, P. R. China E-mail: zwxb301@caas.cn
Supported by Beijing Magtech Co.Ltd