欢迎访问作物学报,今天是

作物学报 ›› 2010, Vol. 36 ›› Issue (09): 1490-1497.doi: 10.3724/SP.J.1006.2010.01490

• 作物遗传育种·种质资源·分子遗传学 • 上一篇    下一篇

利用分子标记筛查小麦相似品种(系)

王立新1,李宏博1,廖琴2,邱军2,常利芳1,刘丽华1,任立平1,高新欢1,赵昌平1,*   

  1. 1北京市农林科学院北京杂交小麦工程技术研究中心,北京 100097;2全国农业技术推广服务中心,北京 100026
  • 收稿日期:2010-01-08 修回日期:2010-04-17 出版日期:2010-09-12 网络出版日期:2010-06-11
  • 通讯作者: 赵昌平, E-mail: bjhwc2003@yahoo.com.cn, Tel: 010-51503968
  • 基金资助:

    本研究由北京市农业育种基础研究创新平台项目(D08070500690801),国家科技支撑计划项目(2006BAD01A02-4)和国家高技术研究与发展计划(863计划)项目(2009AA101102)资助。

Screening Wheat cultivars with Genetic Similarity Using Molecular Markers

WANG Li-Xin1,LI Hong-Bo1,LIAO Qin2,QIU Jun2,CHANG Li-Fang1,LIU Li-Hua1,REN Li-Ping1,GAO Xin-Huan1,ZHAO Chang-Ping1*   

  1. 1Beijing Engineering and Technique Research Center for Hybrid Wheat, Beijing 100097, China;National Agriculture Technology Spreading Service, Beijing 100026, China
  • Received:2010-01-08 Revised:2010-04-17 Published:2010-09-12 Published online:2010-06-11
  • Contact: ZHAO Chang-Ping, E-mail: bjhwc2003@yahoo.com.cn, Tel: 010-51503968

摘要: 在每年的小麦区域试验中均发现一些参试品系高度相像或与审定品种高度相像,为此需建立从大量品种中筛查相似性品种的方法。本文比较了547个国家冬小麦区域试验品系及134个国审品种的分子标记遗传相似系数(GS)和主要农艺性状,发现GS大于0.95的绝大多数品种(系)间主要农艺性状和表型高度相似,分子标记比对结果与田间比较结果吻合程度高达95%。依此确立了用分子标记筛查相似品种的方法体系,解决了无法从大量品种中查找相似品种(系)的问题。

关键词: 小麦品种, 分子标记, 遗传相似系数

Abstract: Cultivars with similar traits are often found in the national winter wheat (Triticum aestivum L.) regional trials. Molecular markers have been introduced to identify such cultivars efficiently and accurately in screening wheat cultivars with genetic similarity. In this study, 681 wheat cultivars and lines were assessed using 105 molecular markers, including 63 genome-SSRs, 21 EST-SSRs, and 21 AFLP-SCARs. These markers were classified into core primer (21 pairs), first-grade standby primer (29 pairs), and second-grade standby primer (55 pairs). The 681 cultivars and lines consisted of 134 released cultivars and 547 lines evaluated in the national winter wheat regional trials from 2005 to 2009. Cultivars were primarily screened with the core primers, and those with similar fingerprint in 19-21 loci were further tested with the first-grade standby primers, and only the confirmed similar cultivars (GS > 0.90) were conduced the final detection by the second-grade standby primers. Finally, the cultivars with total GS value (at least 100 loci) higher than 0.95 were considered as similar ones. These similar cultivars were continuously identified on the basis of main agronomic traits. The results showed that 95% of the similar cultivars detected by molecular markers had identical or highly similar agronomic traits, and only two pairs of cultivars with GS > 0.95 had distinct performances in agronomic traits. Thus, the laboratory identification had the accordance with the field test by 95%, suggesting that these molecular markers are effective in bulk screening similar cultivars in wheat regional trials.

Key words: Winter wheat, molecular marker, genomic similarity coefficient

[1] Yang X-Q(杨新泉), Liu P(刘鹏), Han Z-F(韩宗福), Ni Z-F(倪中福), Liu W-Q(刘旺清), Sun Q-X(孙其信). Comparative analysis of genetic diversity revealed by genomic-ssr, est-ssr and pedigree in wheat (Triticum aestivum L.). Acta Genet Sin (遗传学报), 2005, 32(4): 406-416 (in Chinese with English abstract)  
[2] Li G-Y(李根英), Dreisigacker S, Warburton M, Xia X-C(夏先春), He Z-H(何中虎), Sun Q-X(孙其信). Development of a fingerprinting database and assembling an SSR reference kit for genetic diversity analysis of wheat. Acta Agron Sin (作物学报), 2006, 32(12): 1771-1778 (in Chinese with English abstract)   
[3] Chen X-H(陈先红), Xu L-Y(徐利远), Peng Z-S(彭正松), Du W-P(杜文平), Yu G-R(余桂蓉), Zhong C-S(钟昌松), Qu J-P(曲继鹏), Hu F-L(胡凤林). SSR Analysis of genetic diversity for wheat cultivars (lines) in the southwest of China. J Triticeae Crops (麦类作物学报), 2008, 28(1): 6-10 (in Chinese with English abstract)  
[4] Hao C-Y(郝晨阳), Dong Y-C(董玉琛), Wang L-F(王兰芬), You G-X(游光霞), Zhang H-N(张洪娜), Ge H-M(盖红梅), Jia J-Z(贾继增), Zhang X-Y(张学勇). Genetic diversity and construction of core collection in Chinese wheat genetic resources
[J].Chin Sci Bull (科学通报.2008, 53(8):1518-1526  
[5] Jones H, Jarman R J, Austin L, White J, Cooke R J. The management of variety reference collections in distinctness, uniformity and stability testing of wheat
[J].Euphytica.2003, 132:175- 
[6] Leigh F, Lea V, Law J, Wolters P, Powell W, Donini P. Assessment of EST- and genomic microsatellite markers for variety discrimination and genetic diversity studies in wheat
[J].Euphytica.2003, 133:359-366 
[7] Li R-Y(李汝玉), Li Q(李群), Zhang W-L(张文兰), Zhang H(张晗), Song G-A(宋国安), Wang D-J(王东建). Application of SSR markers to identification and protection of wheat variety. Shandong Agric Sci (山东农业科学), 2007, (6): 14-17 (in Chinese)  
[8] Noli E, Teriaca M S, Sanguineti M C, Conti S. Utilization of SSR and AFLP markers for the assessment of distinctness in durum wheat
[J].Mol Breed.2008, 22:301-313 
[9] Zhang X Y, Li C W, Wang L F, Wang H M, You G X, Dong Y S. An estimation of the minimum number of SSR alleles needed to reveal genetic relationships in wheat varieties: I. Information from large-scale planted varieties and cornerstone breeding parents in Chinese wheat improvement and production. Theor Appl Genet, 2002, 106: 112-117  
[10] You G X, Zhang X Y, Wang L F. An estimation of the minimum number of SSR loci needed to reveal genetic relationships in wheat varieties: Information from 96 random samples with maximized genetic diversity
[J].Mol Breed.2004, 14:397-403  
[11] Wang L-X(王立新), Chang L-F(常利芳), Li H-B(李宏博), Ji W(季伟), Liu L-H(刘丽华), Zhao C-P(赵昌平). Molecular markers for estimating distinctness, uniformity and stability of wheat cultivars of regional trials
[J].Acta Agron Sin (作物学报.2010, 36(7):1114-1125 
[12] Wang L-X(王立新), Li H-B(李宏博), Ge L-L(葛玲玲), Sun H(孙辉), Yao J(姚骥), Qiu J(邱军), Zhao C-P(赵昌平). A new scoring method of SSR patterns for wheat. J Triticeae Crops (麦类作物学报), 2006, 26(4): 164-168 (in Chinese with English abstract)  
[13] Wang L-X(王立新), Li Y-F(李云伏), Chang L-F(常利芳), Huang L(黄岚), Li H-B(李宏博), Ge L-L(葛玲玲), Liu L-H(刘丽华), Yao J(姚骥), Zhao C-P(赵昌平). Method of ID constitution for wheat cultivars. Acta Agron Sin (作物学报), 2007, 33(10): 1738-1740 (in Chinese with English abstract) 
[14] Ji W(季伟), Wang L-X(王立新), Sun H(孙辉), Wang M-Y(王茅雁), Zhao C-P(赵昌平). Predigestion of wheat SSR analysis protocol. J Agric Biotechnol (农业生物技术学报), 2007, 15(5): 907-908 (in Chinese with English abstract)  
[15] Wang L-X(王立新), Ji W(季伟), Li H-B(李宏博), Ge L-L(葛玲玲), Xin A-H(信爱华), Wang L-X(王丽霞), Chang L-F(常利芳), Zhao C-P(赵昌平). Estimating the uniformity and stability of wheat cultivars based on ratio of homozygous DNA locus. Acta Agron Sin (作物学报), 2009, 35(12): 2197-2204 (in Chinese with English abstract)  
[16] Hao C-Y(郝晨阳), Wang L-F(王兰芬), Zhang X-Y(张学勇), You G-X(游光霞), Dong Y-C(董玉琛), Jia J-Z(贾继增), Liu X(刘旭), Shang X-W(尚勋武), Liu S-C(刘三才), Cao Y-S(曹永生). Changes of genetic diversity of wheat varieties released in China
[J].Sci China (Ser C) (中国科学·C辑.2005, 35(5):408-415  
[17] Wang L-X(王立新), Chang L-F(常利芳), Huang L(黄岚), Wang X-W(王晓维), Zhao C-P(赵昌平). Sequence polymorphism of wheat AFLP fragments and conversion of AFLP marker to SCAR marker. J Triticeae Crops (麦类作物学报), 2007, 27(6): 943-951 (in Chinese with English abstract)  
[18] Wang X-W(王晓维), Wang L-X(王立新), Chang L-F(常利芳), Wei J-M(魏建民), Zhao C-P(赵昌平). Exploitation and application of AFLP-SCAR markers in wheat. J Triticeae Crops (麦类作物学报), 2008, 28(5): 738-744 (in Chinese with English abstract)
[1] 翟胜男, 曹新有, 李豪圣, 李吉虎, 李法计, 刘金栋, 夏先春, 吕莹莹, 马瑞峰, 王颖, 耿洪伟, 刘建军. 小麦Pod-A1、Pod-D1和Pod-2D位点等位变异对籽粒过氧化物酶活性的遗传效应分析[J]. 作物学报, 2026, 52(6): 1593-1603.
[2] 彭佳泺, 李颖, 李丹丹, 杨军宁, 郭学峰, 张文姣, 俞晓雪, 周亚荣, 王振玉, 王彩香, 马雄风, 宿俊吉. 陆地棉I类LBD家族成员鉴定及GhLBD6调控开花期的功能和单倍型分析[J]. 作物学报, 2026, 52(6): 1682-1697.
[3] 张献丰, 郭利建, 李康春, 孔斌雪, 刘玉芳, 车卓, 杨德龙. 小麦ABHD6基因家族鉴定与粒重功能标记开发[J]. 作物学报, 2026, 52(6): 1711-1727.
[4] 王楚锐, 李开祥, 赵志, 肖麓, 唐国永, 赵志刚, 徐亮, 杜德志, 柳海东. 甘蓝型春油菜早花基因BnCRY2功能位点KASP标记的开发及应用[J]. 作物学报, 2026, 52(3): 708-721.
[5] 王粤生, 葛冬冬, 程兰斐, 陈春环, 王长有, 刘新伦, 李停栋, 邓平川, 吉万全, 赵继新. 小麦-华山新麦草二体异代换系16DH25-7的分子细胞遗传学及抗病性鉴定[J]. 作物学报, 2026, 52(2): 433-445.
[6] 吕国锋, 范金平, 吴素兰, 张晓, 赵仁慧, 李曼, 王玲, 高德荣, 别同德, 刘健. 早熟小麦品种扬麦37主要目标性状的遗传构成分析[J]. 作物学报, 2025, 51(6): 1538-1547.
[7] 展宗冰, 靳奇峰, 刘迪, 吕迎春, 郭莹, 张雪婷, 虎梦霞, 王尚, 杨芳萍. 甘肃省小麦农家种老芒麦分子鉴定及其重要性状评价[J]. 作物学报, 2025, 51(3): 609-620.
[8] 徐晓伟, 冯晶, 王凤涛, 童朝阳, 张建周, 李春盈, 蔺瑞明. 小麦地方品种蚕老麦成株抗条锈病QTL定位[J]. 作物学报, 2025, 51(11): 2933-2943.
[9] 焦文娟, 白斌, 谢克莱·依拉木, 张飞飞, 贾秋珍, 耿洪伟, 程宇坤. 295份国内外小麦种质资源条锈病抗性评价及抗病基因分子检测[J]. 作物学报, 2025, 51(11): 2886-2898.
[10] 田汉钊, 冯龙婷, 应开, 孟天琪, 武军, 刘玉秀. 外引小麦种质麦谷蛋白亚基组成及评价[J]. 作物学报, 2025, 51(10): 2663-2680.
[11] 刘鑫源, 程宇坤, 王丽丽, 战帅帅, 马孟瑶, 郭玲, 耿洪伟. 新疆小麦过氧化物酶活性基因TaPod-A1、TaPod-A3和TaPod-D1等位变异及分布规律[J]. 作物学报, 2025, 51(1): 68-78.
[12] 艾莎, 李莎, 方治伟, 李论, 李甜甜, 高利芬, 陈利红, 肖华锋, 万人静, 闫多子, 武星廷, 彭海, 韩瑞玺, 周俊飞. 棉花MNP标记位点开发及其在DNA指纹图谱构建中的应用[J]. 作物学报, 2024, 50(9): 2267-2278.
[13] 裴法敬, 张文轩, 张晓, 王昕钰, 彭少兵, 米甲明. 长粒香型的超短生育期水稻新品系创制[J]. 作物学报, 2024, 50(7): 1684-1698.
[14] 范子培, 李龙, 史雨刚, 孙黛珍, 李超男, 景蕊莲. 小麦TabHLH112-2B基因克隆及每穗小穗数相关功能标记开发[J]. 作物学报, 2024, 50(2): 403-413.
[15] 柯会锋, 苏红梅, 孙正文, 谷淇深, 杨君, 王国宁, 徐东永, 王洪这, 吴立强, 张艳, 张桂寅, 马峙英, 王省芬. 棉花现代品种资源产量与纤维品质性状鉴定及分子标记评价[J]. 作物学报, 2024, 50(2): 280-293.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!