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Acta Agron Sin ›› 2012, Vol. 38 ›› Issue (08): 1361-1368.doi: 10.3724/SP.J.1006.2012.01361

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Chromosomal Localization of Transcription Factors in Gossypium hirsutum

LI Li**,WANG Shun-Feng**,LIU Fang,TANG Shi-Yi,TAN Zhao-Yun,ZHANG Jian,TENG Zhong-Hua,LIU Da-Jun,ZHANG Zheng-Sheng*   

  1. College of Agronomy and Biotechnology, Southwest University / Engineering Research Center of South Upland Agriculture, Ministry of Education, Chongqing 400716, China
  • Received:2011-12-31 Revised:2012-04-16 Online:2012-08-12 Published:2012-06-04
  • Contact: 张正圣, E-mail: zhangzs@swu.edu.cn, Tel: 13883608797

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Abstract: A total of 1 455 SSR primer pairs designed from 1 116 Gossypium hirsutum transcription factor DNA sequences in Plant Transcription Factor Databases (PTFD) were used to screen the polymorphic primers between upland cotton cultivars/lines Yumian 1, 7235, CCRI35, and T586. A total of 66 pairs of polymorphic primers were obtained, which are related to 64 transcription factors among 27 transcription factor families. The polymorphic primers included 23 pairs between yumian1 and CRI35, 30 pairs between Yumian 1 and T586, and 33 pairs between Yumian 1 and 7235. Sixty-six polymorphic primer pairs were used to genotype the corresponding recombinant inbred line populations, and 93 loci were obtained, including 23 loci in population (Yumian 1×CRI35) F2:6, 32 loci in population (Yumian 1×T586) F2:7, and 38 loci in population (Yumian 1×7235) F2:6. The transcription factor SSR loci, together with other SSR loci which have already been mapped on upland cotton linkage map in our laboratory, were used to conduct genetic linkage analysis, and 84 loci were mapped on 23 chromosomes, including 32 loci on A genome and 52 on D genome.

Key words: Gossypium hirsutum L., Transcription factor, Chromosomal localization

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